Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01050 ATGGCTTCCACTTTCTATACTCTTTCTGTTTTCTTATTGTCCTTAATCATCTTCACTTTTCCTACTTACTCAATTCACTTCCAAAATCCAAGTTTTAGTCCAAATGATGCCAACATAATCTACCAAGGTTCTGCAGCACAAACTGTGGGACAAGTTAACTTTAACATCAATGAAAAGTATACATGTCAAGTTGGAAGGGCCATCTATGCGAAAAGAGTGTTACTTTGGGACTCGAAAACCGGTCAAGTCACTGACTTCACGACGCATTTCACTTTTATAATCGATACTCAAAGTAAACCTTTATATGGCCATGGCCTAGCCTTTTTCTTGGCTCCTTTTGGATTTGAAATCCCACCCAATTCAGCTAGTGGATTTATAGGCCTATATAACACCACAACAATGGTTTCACCTAGTAACCAAATTGTTCATGTGGAGTTTGATTCGTATCCGAATAAGGAATGGGGTGAAACAACACAACATGTCGGAATCAACAATAATTCAATCGTTTCATCGGTTTCAACACCTTGGAATACAAGTTTACATAGTGGAGACACTGCTGAGGTAAGGATAGACTACAACTCAACAACCAAGAATTTGACTGTATCTTGGAAATACCAAAGTACCTCTAATCCTCAAGAAAAAACTAGTCTTTCGTATCTAATTGATTTGTCGAAGGCGTTACCTGAATGGGTTACCGTTGGATTTTCAGCTGCAACAGGTTTCAATGCAGAATTACATAATCTTTTGTCATGGGAGTTTAACTCAACATTGGATAAAAGCGATGATGGCAACACAAAAGGAACAAGAATAATTGTGATAGTACTAACAATCTCTTGTGGGATTGTAATAGTAGTAGGAGCATTAGTAGCATATGTAGTACTCAAGAGGAAAAGAAAGAGAAGTGAAAAGCAAAAAGAAGAGGCTATGCATTTGAATTCAATGAATGATGACCTTGAAAGAGGAGCAGGACCAAGGAGGTTCACCTACCAAGAACTTGATATTGCCACCAATAACTTCTCTAGAGATAGAAAGTTGGGTCAAGGTGGGTTTGGAGCTGTTTATAAAGGCTACTTTGTTGATTTAGATATACAAGTTGCTGTGAAGAAAATATCAAGAGGGTCAAGACAAGGTAAGAAAGAGTATGTAACTGAAGTTAAAGTGATTAGCCAACTTCGACATCGGAATCTTGTGAAGTTGTTGGGTTGGTGCCATGACAAAGGTGAGTTTCTTCTTGTTTATGAGTTCATGCCTAATGGTAGTCTTGACTCTCATTTATTTGGTAAGAGAATATCTCTTTCTTGGAGTGCAAGGCACAAAATAGTTCTTGGATTGGCTTCTGGTTTGCTTTATCTACATGAAGAATGGGAGAGGTGTGTGGTACATAGAGATATTAAATCAAGTAATGTTATGTTAGATTCTAGTTTCAATGTCAAGCTTGGTGATTTTGGGTTGGCTAAATTAATGGATCATGAGCTTGGTCCTCAGACAACCGGGCTAGCCGGAACATTTGGCTATCTAGCTCCAGAATATGTGAGTACAGGTAGGGCTAGTAAAGAGTCAGATGTGTATAGTTTTGGGATAGTTGTGATGGAAATAACTTGTGGAAAGAAAGCTACTGAAGTTATGAAGGAAAAAGGTGAAGAGAAGGGAATGATAGAGTGGGTTTGGGATCATTATGGAAGAGGAGAACTACTTATGGCAATGGATGAGAATTTGAGAAAGGATTTTGATGAGAAACAAGTGGAGTGTTTGATGATTGTTGGATTATGGTGTGCTCATCCTGATGTGAATCTAAGACCATCAATTAGACAGGCAATTCAAGTGCTTAATTTTGAGGTTGCTTTGCCAAATCTTCCACCAAAGAGGCCTGTTGCAACATATCATGCTCCTACACCATCTGTAAGCTCTGTTGAAGGTTCCATAACCACAAGCCTTCAAGATGGTCGTTAA 1950 0.3851 MASTFYTLSVFLLSLIIFTFPTYSIHFQNPSFSPNDANIIYQGSAAQTVGQVNFNINEKYTCQVGRAIYAKRVLLWDSKTGQVTDFTTHFTFIIDTQSKPLYGHGLAFFLAPFGFEIPPNSASGFIGLYNTTTMVSPSNQIVHVEFDSYPNKEWGETTQHVGINNNSIVSSVSTPWNTSLHSGDTAEVRIDYNSTTKNLTVSWKYQSTSNPQEKTSLSYLIDLSKALPEWVTVGFSAATGFNAELHNLLSWEFNSTLDKSDDGNTKGTRIIVIVLTISCGIVIVVGALVAYVVLKRKRKRSEKQKEEAMHLNSMNDDLERGAGPRRFTYQELDIATNNFSRDRKLGQGGFGAVYKGYFVDLDIQVAVKKISRGSRQGKKEYVTEVKVISQLRHRNLVKLLGWCHDKGEFLLVYEFMPNGSLDSHLFGKRISLSWSARHKIVLGLASGLLYLHEEWERCVVHRDIKSSNVMLDSSFNVKLGDFGLAKLMDHELGPQTTGLAGTFGYLAPEYVSTGRASKESDVYSFGIVVMEITCGKKATEVMKEKGEEKGMIEWVWDHYGRGELLMAMDENLRKDFDEKQVECLMIVGLWCAHPDVNLRPSIRQAIQVLNFEVALPNLPPKRPVATYHAPTPSVSSVEGSITTSLQDGR 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01050 649 Gene3D Transferase(Phosphotransferase) domain 1 416 630 - -
Vivi7g01050 649 ProSitePatterns Protein kinases ATP-binding region signature. 345 369 IPR017441 GO:0005524
Vivi7g01050 649 ProSiteProfiles Protein kinase domain profile. 339 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01050 649 MobiDBLite consensus disorder prediction 624 649 - -
Vivi7g01050 649 SUPERFAMILY Protein kinase-like (PK-like) 317 623 IPR011009 -
Vivi7g01050 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Vivi7g01050 649 FunFam L-type lectin-domain containing receptor kinase IX.1 23 266 - -
Vivi7g01050 649 CDD STKc_IRAK 345 610 - -
Vivi7g01050 649 PANTHER - 53 611 - -
Vivi7g01050 649 FunFam Lectin-domain containing receptor kinase A4.3 416 629 - -
Vivi7g01050 649 Pfam Legume lectin domain 25 264 IPR001220 GO:0030246
Vivi7g01050 649 MobiDBLite consensus disorder prediction 629 649 - -
Vivi7g01050 649 SMART serkin_6 339 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01050 649 CDD lectin_legume_LecRK_Arcelin_ConA 25 257 IPR001220 GO:0030246
Vivi7g01050 649 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 263 IPR013320 -
Vivi7g01050 649 ProSitePatterns Legume lectins alpha-chain signature. 227 236 IPR000985 -
Vivi7g01050 649 FunFam L-type lectin-domain containing receptor kinase IX.1 324 415 - -
Vivi7g01050 649 Gene3D - 23 279 - -
Vivi7g01050 649 Pfam Protein kinase domain 340 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g01050 649 Gene3D Phosphorylase Kinase; domain 1 324 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01050 Vivi-Chr7 55073990 55076162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01050 9 628 Receptor kinase-like Gene Family AT5G10530 57.188 0.0 725
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vivi7g01050 Pkinase 1.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01050 - - qsa:O6P43_033286 844.343