Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01033 ATGGCTAGGCCTATTGAAATAATAGTAGACATCAACGACGGAAAAGAGCTTTGGAAGCTTGCTGTTAGGATTCATCACAGATGGAATGTCGTGTCTAACAACAAGGAACATTTTGAAATGATCTTTGTTGACAAATCGGGTGATGATATTCATGTTGTTGTTCCAGCATCGCATATGTCGGTGTTCAACCAAAAATGCCTATTAGACCATACCTATACCGTATCAAATTTTAAGGTCGTGCCGAATGTCCCGGCCTTTAAGGCATCAGCACACAAATATATGCTAAAGTTTATTGCTAGAACGTCTGTCGTTGATGATGACAAACATGAGATACCCCTGAAGCCGATTGTTTTTACAAGTTGTTCAGACATAATAATAGGGAAGTTTGTCAAAGATGTCTTGCTTGATGTCATTGGAATGGTGGGCAGTATTGGATATGCACAGGCTCAGTCGGGTGCAAAGAAACAACAGATTAATATGGTGTTACGAGACCACAGCAACAACATATTGAACTGTACTCTTTGGGAATCATATGCGGATCAGTTCATGAGGTTTAATCAAGATAAGGTTGATGCGTCAGTTACGACCATTGTGTTGCTTCAGTATGCCAAAATGAAGGAAGAAGGTTACCTCCTCACCTATATTAAAGAGAGTGTTGATGAGGCAAAAATAGATGCCCTTGAAGACCGTGAATTGGTTACGATGAGCTTCATTTTGCATTCAGATCTAGAGATTACTTCTGAGCACAAACCTGATGCTATCACACCTGCTGGTAAGAGGCATTTTCCTGGTGCATCAAGTGAATCCACTACTTTGGAAGGGTTATGTGATGGAGAACTGACATCAAACAAGCTGAAGAAGATAATTAAATTGGATAAGAATGATTAG 888 0.3986 MARPIEIIVDINDGKELWKLAVRIHHRWNVVSNNKEHFEMIFVDKSGDDIHVVVPASHMSVFNQKCLLDHTYTVSNFKVVPNVPAFKASAHKYMLKFIARTSVVDDDKHEIPLKPIVFTSCSDIIIGKFVKDVLLDVIGMVGSIGYAQAQSGAKKQQINMVLRDHSNNILNCTLWESYADQFMRFNQDKVDASVTTIVLLQYAKMKEEGYLLTYIKESVDEAKIDALEDRELVTMSFILHSDLEITSEHKPDAITPAGKRHFPGASSESTTLEGLCDGELTSNKLKKIIKLDKND 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01033 295 Gene3D - 110 224 IPR012340 -
Vivi7g01033 295 CDD RPA1_DBD_A_like 19 103 - -
Vivi7g01033 295 SUPERFAMILY Nucleic acid-binding proteins 8 104 IPR012340 -
Vivi7g01033 295 Gene3D - 3 105 IPR012340 -
Vivi7g01033 295 SUPERFAMILY Nucleic acid-binding proteins 121 208 IPR012340 -
Vivi7g01033 295 Pfam Domain of unknown function DUF223 39 134 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01033 Vivi-Chr7 54685684 54687579 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g01033 8 207 Core DNA Replication Machinery Family AT2G06510 21.327 1.91e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01033 - - vvo:131613993 330.872