Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g01004 AAAATATATACATTATTACCGCCTTCAAGTTCTACAAGAACCCATTCCCTCCTTCACCGCCCCAAATTCTTCGCAACTCTCTCTCCTCTCTCTCTCCTCTCTCTCTCTCTCTATATTTCTCTCGCATTTTTTTCAGTGTCTCCAATCAGTATCTTCAAACTGGCGTTCGAGAATCAAGACACAGTTCGTGAAATCAAACCCAAGAATAGGAGAATCATGGGTGCTGGAGGACCTGATGATGAAGAAAATAGATGGCCTCCATGGTTGAAACCTCTGCTGAAAGAACGTTTCTTTGTTCAATGTAAGATGCACGCTGATTCACATAAGAGTGAGTGTAACATGTACTGTTTGGATTGTATGAATGGTGCTCTTTGTTCTCTGTGTCTCAATTATCATAAAGATCATCGCGCTATTCAGATAAGGAGGTCTTCATACCATGATGTGATTAGGGTGAATGAGATTCAGAAGGTGTTGGATATTTCCGGGGTTCAAACATATATTATCAACAGTGCTAGGGTTGTGTTCTTGAATGAGAGACCTCAGCCGAGGCCCGGCAAAGGCGTCACCAACACTTGCGAAGTCTGCGAGCGCAGTCTCCTCGACTCGTTTCGATTCTGTTCTCTTGGTTGCAAGATTGTTGGAACATCGACGAATTTCCAGAAGAAGAGCAAGTTAGCTTCCATGATATCAGACTCAGAGGATTCATACAGCAGCAGTTGCAGCCATGGAAAGCTGAAGAACAACATCAAGGTGCAAAGCTTCACTCCTTCAACACCACCACCAACTTCAGTTAATTACAGAACAGCCAAAAGAAGAAAGGGAATTCCGCATCGTGCCCCAATGGGAGGACTAGTCTTGCAATACTAG 867 0.4371 KIYTLLPPSSSTRTHSLLHRPKFFATLSPLSLLSLSLYISLAFFSVSPISIFKLAFENQDTVREIKPKNRRIMGAGGPDDEENRWPPWLKPLLKERFFVQCKMHADSHKSECNMYCLDCMNGALCSLCLNYHKDHRAIQIRRSSYHDVIRVNEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSTNFQKKSKLASMISDSEDSYSSSCSHGKLKNNIKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLVLQY 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g01004 288 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 79 281 - -
Vivi7g01004 288 Pfam PLATZ transcription factor 141 212 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g01004 Vivi-Chr7 53364865 53366848 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vivi7g01004 PLATZ 3.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g01004 - - vvo:131619063 553.903