Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00995 ATGGCTTTGGAAACTATTATCTATGACACTATTTCTGCAACTCCATTTAGTAGTACTAGTTCTTATCATCATGATACAATAGAGTCCTCTAGTTTCTTGGAAAATGGAATGAACTACGAGCAACAATATTATGAAGGTGCAATATTTGATCAGAACAACAGAAAAAGAGAATTTGTGGAGCAAGATGAAACAACAATGAGTAATGATCAAGTTGTGCAAGGGAGGAAGAAGAGGAGAAGGAAGCCAAGAGTTTGTAAGAACAAAGAAGAAGCTGAGACTCAGAGAATCACTCACATTACAGTCGAGAGAAACCGGAGAAAACAAATGAATGAACATCTCGCCGTTCTTCGATCTCTCATGCCCGAATCCTATGTTCAAAGGGGTGACCAAGCTTCAATAGTTGGTGGAGCCATAGAGTTTGTGAAGGAGCTAGAACATATCTTGCAATCACTTGAAGCAAGAAAGCTACAACTCTTGCAACAAGAACTAGCATTACAACAAAACGAAGAAACATCTAATGTTTCAAATCTCAATAATATGAAACCACCATTTTCACAGTTTTTTGTGTATCCTCAGTACACATGGTCCCAAATTCCTAATAACAAATACACATCCAAGACCAAAGCTGCCATAGCCGATATCGAGGTTACATTAATCGAGACTCATGCAAATCTTAGAATTCTCACCAAAACAAGACCTGGACAGTTAACTAAACTGGTTGCTGGTTTTCAAACTCTCTTTCTCACCGTTCTTCATCTCAATGTCACTACCGTACAACCTTTGGTTTTCTACTCTATCAGTGCCAAGGTTGAAGAAGGGTTTCAACTTGGTTCAGTAGATGGCATTGCAACAGCAGTTCATCATTTACTTGGAAGAATTGAGGAAGAAGCTTCACTATGTTGTTAA 906 0.3841 MALETIIYDTISATPFSSTSSYHHDTIESSSFLENGMNYEQQYYEGAIFDQNNRKREFVEQDETTMSNDQVVQGRKKRRRKPRVCKNKEEAETQRITHITVERNRRKQMNEHLAVLRSLMPESYVQRGDQASIVGGAIEFVKELEHILQSLEARKLQLLQQELALQQNEETSNVSNLNNMKPPFSQFFVYPQYTWSQIPNNKYTSKTKAAIADIEVTLIETHANLRILTKTRPGQLTKLVAGFQTLFLTVLHLNVTTVQPLVFYSISAKVEEGFQLGSVDGIATAVHHLLGRIEEEASLCC 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00995 301 PANTHER MAX DIMERIZATION, MAD 41 297 - -
Vivi7g00995 301 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 93 144 IPR011598 GO:0046983
Vivi7g00995 301 MobiDBLite consensus disorder prediction 62 91 - -
Vivi7g00995 301 Pfam Helix-loop-helix DNA-binding domain 94 145 IPR011598 GO:0046983
Vivi7g00995 301 SMART finulus 99 150 IPR011598 GO:0046983
Vivi7g00995 301 CDD bHLH_AtFAMA_like 96 155 - -
Vivi7g00995 301 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 92 165 IPR036638 GO:0046983
Vivi7g00995 301 Coils Coil 141 168 - -
Vivi7g00995 301 Gene3D - 85 163 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00995 Vivi-Chr7 52721696 52723834 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00995 85 270 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 56.684 2.47e-61 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Vivi7g00995 HLH 5.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00995 - - pvu:PHAVU_003G284500g 391.349