Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00968 ATGGAGCTATTCCCAGCACAACCAGATTTGTCATTGGAAATCAGTCTTCCAAACAACATACAAACATCATCAAGATCATCAAGATGGAGAAGAAATTCAGATGATGATAAAGAAGATGAAATGGATTTGAGATTTTGGAAAAAATCAAACATCTATGATCTTTCTCTCACCAATCCAATGGCTTCTTCATCTTCTTCTTCTTCTTATTCTTCCACTACTTCAAATCTCAACAATCTCATAACCAACCCTTTTCAACCCTTTCATCAAAACCAAAACAATTACCAAAGAAGTCTAAGTGAAGAACTAGGGTTTCTAAAACCTATAAGAGGAATTCCACTTTATCAAAACCCTACTCCTTCTTCTGTTGCATTATTTTCTCAACCATCCTTTGATGCTGCTGCTGCTGCTTCCAATTCTTCAATTTCAACAACACCTTTTCATTCTCAAAATTTCATGAGATCAAAACTGTTACCGCGGTTTCCTTCGAAACGTAGCGTAAGAGCTCCAAGGATGCGTTGGACTTCCACTCTTCATAATCGCTTTGTTCATGCTGTTGAGCTTTTAGGTGGCCATGAAAGAGCTACACCAAAATCAGTTCTTGAGCTTATGGATGTAAAGGATCTAACCCTATCACATGTTAAATCTCATTTGCAGATGTACAGGACTGTTAAAATTACTGATAGAGCAGCATCACCAGGGCAATTTGATGTATATGACAATGGTTCATCTGGAGATACTTCTGAAGATTTCATGTTTGACATAAACTCTTCAACAAGGTCTAATGATCTAGAGATTAAGTTGCCTAGAGAAATTACTACTAATCAAGATAAAGAAAATCATGGCTTTTGGAGCATTTCTTCAAGGGAAGCTTGGTTGCATGGTAAGCCAGTAGACTCCAATGGAAACTTGCCTTATATTGAGGGAATGGATCCAAAGTGTCTAAGCAATGAAAGAAATTCATCAGATGGAAGCTCTTCCTCAAACATTTCAGGAACAAGTTTCAAGAATCCAAATTTGGAATTCACATTGGGAAGGTCACTTTGA 1044 0.3716 MELFPAQPDLSLEISLPNNIQTSSRSSRWRRNSDDDKEDEMDLRFWKKSNIYDLSLTNPMASSSSSSSYSSTTSNLNNLITNPFQPFHQNQNNYQRSLSEELGFLKPIRGIPLYQNPTPSSVALFSQPSFDAAAAASNSSISTTPFHSQNFMRSKLLPRFPSKRSVRAPRMRWTSTLHNRFVHAVELLGGHERATPKSVLELMDVKDLTLSHVKSHLQMYRTVKITDRAASPGQFDVYDNGSSGDTSEDFMFDINSSTRSNDLEIKLPREITTNQDKENHGFWSISSREAWLHGKPVDSNGNLPYIEGMDPKCLSNERNSSDGSSSSNISGTSFKNPNLEFTLGRSL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00968 347 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 8 346 IPR044847 GO:0000976|GO:0006355|GO:0010158
Vivi7g00968 347 MobiDBLite consensus disorder prediction 310 334 - -
Vivi7g00968 347 Pfam Myb-like DNA-binding domain 170 221 IPR001005 -
Vivi7g00968 347 Gene3D - 168 225 - -
Vivi7g00968 347 NCBIfam myb-like DNA-binding domain, SHAQKYF class 169 222 IPR006447 GO:0003677
Vivi7g00968 347 MobiDBLite consensus disorder prediction 314 334 - -
Vivi7g00968 347 FunFam Myb family transcription factor 167 225 - -
Vivi7g00968 347 SUPERFAMILY Homeodomain-like 166 222 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00968 Vivi-Chr7 51954079 51959042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00968 1 344 G2-like Transcription Factor Family AT4G17695 38.315 3.94e-50 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vivi7g00968 Myb_DNA-binding 9.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00968 - - vvo:131633436 618.231