Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00911 ATGTCTGATGGAGGAAGAAGAGTGAAATCAAAGTCCACAATTAAGAGAAAACCAATAATTCGCAAGAAAGAAACCGTGCTATCACCGCCACCAGAATTGCCTAATCATGTTAATAACATGATCAAAGTGTTGAATGGTAGTGATATTAAATATATCATGTGCAAGGAATTGTATAAAACTGATCTCAACCCTAACAACAATCGTCTTTCAATGCCAATTTCACAAATCAAGTCTGATTTTCTCACAGAAATAGAAAAAACATCCTTGAAAACAAGGGATCAAGAAGGAAAATCGTTTGGTTTAAAAGTGACTGTGCTAGATACTTGTTTTAACGAGTTCTCACTGTCTTTGAAGAAGTGGGACATGACGAGTACTAGTATTTATAATCTTCATCCTGGTTGGACACCTGTTTTGTTGAAAAATAATTTTAAAGAGCATCAAAAACTTGACATTTGGTCATTTAGAGTTAACGGCAAGTTGCACCTTTTACTCAACGATAACGAGTCACAAGAAATTGAAAAAGGTAAAGAGCTGAAGAATTCAACCGCGGTTTCGAAAACGGAAGAATAA 570 0.3509 MSDGGRRVKSKSTIKRKPIIRKKETVLSPPPELPNHVNNMIKVLNGSDIKYIMCKELYKTDLNPNNNRLSMPISQIKSDFLTEIEKTSLKTRDQEGKSFGLKVTVLDTCFNEFSLSLKKWDMTSTSIYNLHPGWTPVLLKNNFKEHQKLDIWSFRVNGKLHLLLNDNESQEIEKGKELKNSTAVSKTEE 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00911 189 SUPERFAMILY DNA-binding pseudobarrel domain 51 162 IPR015300 -
Vivi7g00911 189 MobiDBLite consensus disorder prediction 1 31 - -
Vivi7g00911 189 Pfam B3 domain-containing protein At2g31720-like 33 138 IPR005508 GO:0003677
Vivi7g00911 189 Gene3D - 33 169 IPR015300 -
Vivi7g00911 189 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 8 166 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00911 Vivi-Chr7 49957783 49958352 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00911 37 164 B3 DNA Binding Superfamily AT1G05930 26.154 4.15e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00911 - - vvo:131619010 338.191