Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00910 ATGGAAGAGACTATTTTGGATGATGAACTTGAATCAAATATTAACTTTTCTGAAGAGCCACAAATTAATATTGTTGCAGAAGAGAATATTGAGCCTTATGTAGGAATGGAATTTGATTCATTGGAAAAAGCTACAGATTTTTACAGATTATTTTCTAAAGCAAAAGGATTTGGAATTCGTACTCGATCAAGTAAGGCAAATTATTGCATTTTAGTATGTGTTAGGGAGGGTAAACTACCAGTGAAAAGTACGAATGATAATAACGTGGAAGTGAAGAAAAAATGTTCAACCATGCGCATGGGATGTCAAGCATCACTTACTATATCAAAAGAAAATAATAGCCACATGTGGACTGTAAAATCATATGACAATAATCACAATCATGTCATGGCTAGTCCCAAAAGTGTATCTTATTTGAGGTGTCATAAAAATATGAATAGTGCTGCAAAAAATCTTATTGAGAAGTTTAGTGAAGAAGGTCTGCCTACTGGAAAGGTTGCTTCAATGTTTAAGGAAAGTGATTTAGCTTTTTCCAATAGAGACTGTTGGAATCACATGAGAAATGTTCGAACGAATAATTTGGATATCGGAGATGCACAAGCAGTTTTCAATTATTGCAAGCACAAGCAAGCTCAAAATTCTAATTTTTTCTATGCAATACAGTGTGACGATGAAGCTAGAATGGTAAAAAAAAATTGGGTTGATGCCAGATCAAGTTTAGCTTATCAACATTTTGGAGACGTTGTTACCTTTGACACTACTTATAAAACCAACAAATATAGTATGCTATTTGCCCCATTTACTGGGGTAAACCATCATCTCCAATCAATTTTATTTGGCTGTGCATTATTACAAGATGAATCAGAAATATCTTTTACATGGTTATTTGATACTTGGCTTGAAGCAATGAATGGAAAAAAACCAATATCAATAATAACTGATCAAGACTTAGCTATTGGAGCTGCAGTGACTAAGGTATTTCCACAAACCCGCCATCGTTTATGTTTGTGGCACATAAGAAAGAAGTTTCCAGAAAAGCTTGCACATATATATCACAAAAAATCAAAGTTTAAGCATGAGCTAAAGAGATGCATTCGAGAATCACCAACCGTAAATGATTTTGAAGTTGATTGGCAGCAAATAATGGATACCTACAATTTACAAGAAAATGAATGGCTTCAACGGTTGTTTGAAATTCGAGAGTCATGGATACCCGTTTATAACAGAAAAACTTTTTTTGCCGGAATGAATACTACACAAAGAAGTGAGAGCATCAATTCTTTTTTTGACTCTTTTGTTAATTCAACCACAACATTACAAGAATTTGTGGTAAAATTTGAAATGGCAGTTAATAATCGTTATGAAGCTGAAAAGAGAGAGGACTTTGAGTCTAAACATAAATCACGCATTTTGAGTATCAAATCGAAAATAGAGGGGCATGCGACATCGATTTATACAAGAAATATGTTTGGAAAATTTCAACATGAACTTGCACTTGTTAGCCAATTTACAAAGCACAAGTTTGAGAAAAATGGCTCACAATATAGGTATCAAATATCCAATTGTTTTAAAGATCGAGACAAATTCATCGTTGATATAAATTTAGACTCAAAGGATGCTACTTGTACTTGTCAGCTTTTTGAATTTATGGGAATATTATGCAGGCACATTTTGACAATTTTTCAAACTAAAAATATACTTCAAATTCCCAGTCAATATATATTGCATAGTTGGACAAAAGAAGGTAACAGATGCATGGAGGTTAGTGTTATGGATTCTTATAATGATGAGGTGGATACTTTGAGAAGCATACACTTGAATCAACAATTTAGCAAATTTTCAAAATTTTCTAAACAATCAAAAGAAGCATATGAGTTTATTATGGTAGAGTTTGAGCGTATTTGTAATACTTTGGAAACAATGGGATTAAAATTCTCCAATGTAAATGATGCTCCTATAGATTTGCAACAACAAGATGTAGATGACACACATGATAATGTTTCGAATTTTATTATCCAAGACCCCAATGTGTCACAAAAAAAAGGTAGAAAGAGAAAAGATTCTGACAATGTCTGTGTACAAGAAAGATATAAACGTGGTGTAGAATTGTCGATGGATAAGACACTAGTTAAAAGAAGGGCATGCAAATACTGTGGAGAATATGGTCACTATCAATCAACTTGCAAAAATAAAACAACTTGA 2202 0.3288 MEETILDDELESNINFSEEPQINIVAEENIEPYVGMEFDSLEKATDFYRLFSKAKGFGIRTRSSKANYCILVCVREGKLPVKSTNDNNVEVKKKCSTMRMGCQASLTISKENNSHMWTVKSYDNNHNHVMASPKSVSYLRCHKNMNSAAKNLIEKFSEEGLPTGKVASMFKESDLAFSNRDCWNHMRNVRTNNLDIGDAQAVFNYCKHKQAQNSNFFYAIQCDDEARMVKKNWVDARSSLAYQHFGDVVTFDTTYKTNKYSMLFAPFTGVNHHLQSILFGCALLQDESEISFTWLFDTWLEAMNGKKPISIITDQDLAIGAAVTKVFPQTRHRLCLWHIRKKFPEKLAHIYHKKSKFKHELKRCIRESPTVNDFEVDWQQIMDTYNLQENEWLQRLFEIRESWIPVYNRKTFFAGMNTTQRSESINSFFDSFVNSTTTLQEFVVKFEMAVNNRYEAEKREDFESKHKSRILSIKSKIEGHATSIYTRNMFGKFQHELALVSQFTKHKFEKNGSQYRYQISNCFKDRDKFIVDINLDSKDATCTCQLFEFMGILCRHILTIFQTKNILQIPSQYILHSWTKEGNRCMEVSVMDSYNDEVDTLRSIHLNQQFSKFSKFSKQSKEAYEFIMVEFERICNTLETMGLKFSNVNDAPIDLQQQDVDDTHDNVSNFIIQDPNVSQKKGRKRKDSDNVCVQERYKRGVELSMDKTLVKRRACKYCGEYGHYQSTCKNKTT 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00910 733 SUPERFAMILY Retrovirus zinc finger-like domains 710 731 IPR036875 GO:0003676|GO:0008270
Vivi7g00910 733 Pfam SWIM zinc finger 532 565 IPR007527 GO:0008270
Vivi7g00910 733 Pfam FAR1 DNA-binding domain 46 130 IPR004330 -
Vivi7g00910 733 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 20 639 IPR031052 GO:0006355
Vivi7g00910 733 Pfam MULE transposase domain 248 342 IPR018289 -
Vivi7g00910 733 ProSiteProfiles Zinc finger CCHC-type profile. 715 730 IPR001878 GO:0003676|GO:0008270
Vivi7g00910 733 ProSiteProfiles Zinc finger SWIM-type profile. 529 565 IPR007527 GO:0008270
Vivi7g00910 733 SMART 26again6 540 567 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00910 Vivi-Chr7 49953932 49956133 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi7g00910 MULE 9e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00910 - - vvo:131633311 1417.91