Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00905 ATGTCCATGAAGAAGAACACTGCAGAGTTACAAAATCCAGAAATTATGATGCAAAAGAAAGCTATGGCTATTGAGAAGATCAATGCATATATGCAAAAGTTGAAAACAATGGAAAAGAAATTTGATCCACTATCTCATTTTTCTTTGCATAGAGTGTTATCTCAAGAGTCTCCACAATTTTATACTAAAGATGAGTTAGCACAAATAAAGAAAATCAATCACATTGTGTGTCAAGAAGCAAACCTCCCTCTTATTTCACAACGTAATGTGAAAAGAGTAGAAGTCAATGATAAAAAAAGGTGTCGTCCAAGTAATGGAGATATCATGTATGATGAAGAAAGAAGAGTGAAATCAAAGTCCGCAATTACGAGGAAACCAATAATTCGCAAGAAAGAAACTGTGCTATCACTGCCACCAGAATTGCCTAATCATGTCAATAACATGATCAAAGTGTTGAATGGTAGTGATATTAAATATATCATGTGCAAGGAATTGTATAAAACAGATCTCAACCCTAACAACAATCGTCTTTCAATGCCAATTTCACAAATCAAGTCTGATTTTCTTACAGAAATAGAAAAAACATCCTTGAAAACAAGGGATCAAGAAGGAAAACCGTTTGGTTTAAAAGTGACTGTGCTAGATCCTTGTTTTAACGAGTTCTCACTGTCTTTGAAGAAGTGGGACATGACGAGTACTAGTATTTATAATCTTCATCCTGGTTGGACACCTGTTTTGTTGAAAAATAACTTTAAAGAGCATCAAAAACTTGACATTTGGTCATTTAGAGTTAACGGCAAGTTGCACCTTTTACTCAACAATAACGAGTCACAAGAAATTGAAAAAGGTAAAGAGCTGAAGAATTCAACTGCGGTTTCAAAAACGGAAGAATAA 894 0.3412 MSMKKNTAELQNPEIMMQKKAMAIEKINAYMQKLKTMEKKFDPLSHFSLHRVLSQESPQFYTKDELAQIKKINHIVCQEANLPLISQRNVKRVEVNDKKRCRPSNGDIMYDEERRVKSKSAITRKPIIRKKETVLSLPPELPNHVNNMIKVLNGSDIKYIMCKELYKTDLNPNNNRLSMPISQIKSDFLTEIEKTSLKTRDQEGKPFGLKVTVLDPCFNEFSLSLKKWDMTSTSIYNLHPGWTPVLLKNNFKEHQKLDIWSFRVNGKLHLLLNNNESQEIEKGKELKNSTAVSKTEE 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00905 297 Pfam B3 domain-containing protein At2g31720-like 141 246 IPR005508 GO:0003677
Vivi7g00905 297 Gene3D - 141 277 IPR015300 -
Vivi7g00905 297 SUPERFAMILY DNA-binding pseudobarrel domain 159 271 IPR015300 -
Vivi7g00905 297 Coils Coil 20 40 - -
Vivi7g00905 297 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 17 274 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00905 Vivi-Chr7 49895447 49896340 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00905 140 272 B3 DNA Binding Superfamily AT1G05930 25.926 2.15e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00905 - - vvo:131619010 526.554