Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00874 ATGGCTAGAAGAACTATAACCTATAACAACGTTGTTACTCTTCTGTTCTCTAACCTATTGATCTTCTTCATTCCTATTGTCATCTCCCTCAGAAGCCTCACTCCAGACAAATCCATCAACTATAACGAGTTCCTAGTCTCCCAAACCGGAAAATTCGAAGCCGGGTTCACCAACATAGAGACTTCACCAAACATATACTTTTGTATATGGTACAAGAATCTCAACCCAAGGACAATTGTTTGGGTAGCAAATAGAGATACACCACTGCAAAACTCAACAGGAGTATTCAAACTTACTGATACAGGAAATCCAGTCATAGTTGATGGCTTGGAGAACACAATTTGGTTCTCTAATGCATCAACAATTGTAGAGAATCCGTCTCTATTGCTCTTGGACATGGGAAACATCGTTGTACGAAACGGAAGTGTTAATGATGTATGGTGGCAAAGCTTTGATTATCCTGGTGATACTTTATTACCCGGGATGGTTCTTCGAACCGATAGAATCAATGGAGCACATAATTCTTTGATATCATGGAAAAACACAGGTGATCCTGCACGAGGTGAGTTTTCGTATCATATAGATTCTAATGGTTTTCCGCAACTCTTTATTTCGAAAGGACCGGTGTTAGTTTATAGATTAGGCTCATGGAATGGATTTTTCTTCACCGGGATTCCTTGGGAAACACTCTATAGCTATTTCAAATTTTCCTTTGAGTTGACTGAGGAACAAGTTCGATTTAAATATGAACCGTTAAACGACACGATTGTTTCGAGATACCTTATCACTCCGACCGGCTTCGTGCAACGTTACATTTGGTTATATACGACCGAATCTTGGCAACTTTTCCTCGCTGGCCCTGGGGACCAGTGTGAGAATTATAACATATGCGGTGCGAATTCAGATTGTAATGTGGGGAACCAAGAGATATGCAAATGTCTCATTGGTTTCGCACCTAAATCGTCGAATGATAGTGACGGGTGTGTTAGGAAGGTGAAGTTGGATTGTGACGATAGAGATGGATTTGTTAAGTATACAAAGATGAAGTTGCCGGACACGTCTGAGTCGTGGTTTGATGAGAAAATGAATCTTTTGGAATGTGAGAAACAATGCCGGAAAAATTGTAGTTGCATCGCTTATGCGAGTTTAAATATTAGAAATGGTGGAAGTGGATGCATCATTTGGTTCAATAACATCACTGATATGAGGACAGAAATCTTTGTTGGGCAAGAGATTTACATAAGAGTGGCTGCTTCAGAATTAGGTAGTTCAACGGATAACACAAAGAAGAAACTGATAGCAGGTATTTTAGTAGGAATCGGAATCCTTTTCTTGGGTATTACGACGGTTGGATATGTCATCTTTCTAAAGAGGAAAATTCTTCAAAAGTCAGGTAGGGACACGCCAATTAACCATGAAGATAACATGAATCATGAGAAGGAAAGCATTGACATATCAACTTTTCATTTTTCTACCATAGCTAATGCCACTGACAACTTCTCCCAAATTAAGAAACTGGGAGAAGGTGGATATGGACCTGTTTACAAGGGTGTACTAGCAAATGGTAGAGAGATTGCTGTCAAGCGGCTTTCGATTAAATCTGTACAAGGACCACAGGAATTTCAAAATGAAGTTATATTGATTGCAAATCTTCAGCATAGAAATCTTGTGAAACTCATTGGCTGCTGTATTCATAATGATGAAAGAATATTGATTTATGAATACATGCCTAACAGAAGTTTGGACAAATTTATTTTCGATCGAACTAAAAGTCAAGTATTGGATTGGAACACACGTTTTCATATTATAAGCGGGATTGCACGAGGACTTCTGTATCTTCATCAAGATTCTAGAGTAAGAATCATTCATAGAGATCTAAAAACCAGTAATATTCTTCTTGATAACGATATGAACCCAAAGATATCAGACTTTGGACTCGCTAGAGCTTTTGGCGGAGATCACGACGAGGCTAATACAGTCAGAGTAGTGGGAACTCATGGTTACATGCCTCCAGAGTATGCTGTATATGGATCTTTTTCAGTAAAGTCGGATGTCTTCAGTTTCGGTGTTATTGTTCTAGAAATTGTTAGTGGGAGGAAGAGCAGAGAATTTTTCAACCCGGAACATAATCTTAACCTTATTGGACAAGCTTGGAGATTGTGGAGTGAGGATAAACAATTGGAACTGATAGATGAGTCCCTTAAAGGTTCAGTTATTATGGATGAGGCATTAAAATGTATTCACATAGGACTCTTATGTGTGCAAGATAGAGCAGATGATAGGCCTGAAATGTCATCTGTTGTTCTAATGATGAATGGGGAGAGAGCATTGCCTAATCCAAGGCAGCCAGGGTTTTATCCACATGAAGTTGTGTCTTACTCAAGCAAACAAGAATTGTCATCAACAAATGAAATTTCTATTTCAATGTTACACCCAAGATAA 2442 0.3878 MARRTITYNNVVTLLFSNLLIFFIPIVISLRSLTPDKSINYNEFLVSQTGKFEAGFTNIETSPNIYFCIWYKNLNPRTIVWVANRDTPLQNSTGVFKLTDTGNPVIVDGLENTIWFSNASTIVENPSLLLLDMGNIVVRNGSVNDVWWQSFDYPGDTLLPGMVLRTDRINGAHNSLISWKNTGDPARGEFSYHIDSNGFPQLFISKGPVLVYRLGSWNGFFFTGIPWETLYSYFKFSFELTEEQVRFKYEPLNDTIVSRYLITPTGFVQRYIWLYTTESWQLFLAGPGDQCENYNICGANSDCNVGNQEICKCLIGFAPKSSNDSDGCVRKVKLDCDDRDGFVKYTKMKLPDTSESWFDEKMNLLECEKQCRKNCSCIAYASLNIRNGGSGCIIWFNNITDMRTEIFVGQEIYIRVAASELGSSTDNTKKKLIAGILVGIGILFLGITTVGYVIFLKRKILQKSGRDTPINHEDNMNHEKESIDISTFHFSTIANATDNFSQIKKLGEGGYGPVYKGVLANGREIAVKRLSIKSVQGPQEFQNEVILIANLQHRNLVKLIGCCIHNDERILIYEYMPNRSLDKFIFDRTKSQVLDWNTRFHIISGIARGLLYLHQDSRVRIIHRDLKTSNILLDNDMNPKISDFGLARAFGGDHDEANTVRVVGTHGYMPPEYAVYGSFSVKSDVFSFGVIVLEIVSGRKSREFFNPEHNLNLIGQAWRLWSEDKQLELIDESLKGSVIMDEALKCIHIGLLCVQDRADDRPEMSSVVLMMNGERALPNPRQPGFYPHEVVSYSSKQELSSTNEISISMLHPR 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00874 813 ProSiteProfiles PAN/Apple domain profile. 336 417 IPR003609 -
Vivi7g00874 813 Pfam PAN-like domain 336 402 IPR003609 -
Vivi7g00874 813 CDD STKc_IRAK 506 773 - -
Vivi7g00874 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Vivi7g00874 813 Pfam S-locus glycoprotein domain 212 321 IPR000858 GO:0048544
Vivi7g00874 813 Gene3D Phosphorylase Kinase; domain 1 473 575 - -
Vivi7g00874 813 ProSiteProfiles Bulb-type lectin domain profile. 30 151 IPR001480 -
Vivi7g00874 813 SMART serkin_6 500 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00874 813 SUPERFAMILY Protein kinase-like (PK-like) 483 797 IPR011009 -
Vivi7g00874 813 Gene3D Transferase(Phosphotransferase) domain 1 576 779 - -
Vivi7g00874 813 Gene3D - 28 151 IPR036426 -
Vivi7g00874 813 CDD PAN_AP_plant 332 417 - -
Vivi7g00874 813 SMART ntp_6 337 416 IPR003609 -
Vivi7g00874 813 PIRSF SRK 2 813 IPR024171 GO:0004674
Vivi7g00874 813 ProSiteProfiles Protein kinase domain profile. 500 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00874 813 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 465 575 - -
Vivi7g00874 813 CDD B_lectin 42 154 IPR001480 -
Vivi7g00874 813 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 576 779 - -
Vivi7g00874 813 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 185 IPR036426 -
Vivi7g00874 813 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 335 416 - -
Vivi7g00874 813 Pfam D-mannose binding lectin 78 180 IPR001480 -
Vivi7g00874 813 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 20 761 - -
Vivi7g00874 813 Gene3D Hepatocyte Growth Factor 333 410 - -
Vivi7g00874 813 SMART blect_4 36 154 IPR001480 -
Vivi7g00874 813 Pfam Protein kinase domain 500 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00874 Vivi-Chr7 48672075 48675317 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00874 465 813 Receptor kinase-like Gene Family AT3G45860 52.186 5.47e-120 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi7g00874 Pkinase 7.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00874 - - gmx:106794307 966.837