Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00862 ATGAAAAGCATCACATGTTATTTGCTGGTATTCTTGTGCGTGTTATTTACACCTTGTTTTTCAATAACCGATCTCGATGCGTTGCTAAAGCTTAAAGAGTCAATGATAGGAGAGAAAGTGAAACACAACGATTCACTTGGAGACTGGACGTTTTCCAGTTCTGATTCAGCCCACTGTTCGTTCTCCGGTGTAACATGCGATCAAGATAACCGAGTGATAAAGCTGAACGTGACGCAAGTTCCACTCTTTGGAAAAATTTCTAAGGAGATTGGAGCGTTGGATAGACTTGAGAAGCTCATCCTCACCATGGATAATCTCACTGGCGAACTTCCGTTTGAGATATCCAATCTTACCTCTCTGAAAATCCTCAACATCTCTCACAATTACTTCTCTGGTAACTTCCCCGGCAACATCACTCTCCGTATGACCAAACTGGAGGTTCTCGATGCTTATGACAATAGCTTCGCTGGTCATCTTCCAGAGGAAATCGTTAGACTCAAGGAACTCAACTTCTTATGTCTCGCCGGAAACTTTTTCACCGGTAGTATCCCGGAGAGTTACTCGGAGTTTCAGAAGCTGGAGATTTTAAGCATAAACGCAAACAGTTTATCAGGGAAGATTCCTAAGAGCTTGTCTAAATTAAAGACGCTGAAGGAACTCCGGTTAGGTTACAACAACGCTTACGAAGGCGGAGTTCCACCAGAGTTCGGTTCGTTGAAATCTCTCCGATACCTTGAAGTGTCTAACTGTAACCTCACCGGAGAAATTCCACCGAGTCTAGGAAATTTAGAAAACCTAGACAGCTTGTTCTTGCAAATGAACAACCTCACCGGAACAATTCCACCGGAACTCTCTTCCATGAGGAGTCTCATGTCGTTGGATCTCTCCAACAACGACCTCTCCGGAGAGATTCCGGAGAGCTTCTCAAATCTCAAAAACCTCACTCTCTTGAATTTCTTCCAGAACAAGTTTCGCGGTTCTATTCCGGCATTCATCGGCGATCTTCCTCACCTAGAAACGTTTCAGATTTGGGAAAACAATTTCTCTTTTGTATTGCCACAAAATCTCGGTTCAAACGGGAAGTTCATTTTCTTTGACGTTACGAAGAATCACCTCACTGGATTGATTCCACCGGATTTGTGCAAATCGAAGAAACTGCAAACGGTTATCGTTACCGATAACTTCTTTCACGGTCCAATTCCTAAAGGTATCGGCGCGTGTAAGTCACTTCTCAAAATCAGAGTTGCTAATAACTACTTAGACGGACCGGTCCCACAAGGAATTTTTCAACTACCTTCTGTAACGATAATCGAGCTTGGAAATAACCGTTTTAACGGCCAACTACCTTCTGAAGTTTCCGGCGCTAACCTCGGGATTCTCACTATCTCTAACAACTTATTCACCGGGAGGATTCCGGCTTCGATGAAGAATCTCAGATCACTTCAGACGCTGTTGCTTGACGCAAACCAGTTCGTCGGAGAAATTCCGGAGGAAGTCTTTGACTTACCAGTGTTAACCAACTTCAACATAAGCGGTAACAACCTCACCGGTGTAATCCCAACGACGGTTTCTCAGTGTAGATCGTTGACCGCCGTTGATTTCAGCCGGAACATGCTTACCGGCGATGTTCCGAAGGGAATGAAGAATCTCAAGGTTCTCAGCATTTTTAATCTTTCACATAACAACATATCGGGGCTAATCCCCGACGAGATTCGGTTCATGACGAGTCTAACAACGCTGGATCTTTCCTACAACAATTTCACCGGAATAGTCCCCACCGGCGGTCAGTTTTTGGTTTTCAACGACAGGTCGTTTTTCGGAAACCCTAACCTCTGTTTCTCACACCAAACCTCATGCTCTTCCTATATCTTCCCCTCGAGAAAAAGCCACACGAAGGTGAAGGCCATTATTACCGCAATTGCTCTCGCCACAGCGGTGTTACTGGTGATGCTGACGATGCACATGATGAGGAAGAGAAAGCTTCATATTGCGAAAGCATGGAAGTTAACAGCGTTTCAGAGGCTAGACTTCAAAGCAGAGGAAGTCGTGGAGTGTTTGAAAGAAGAGAACATAATAGGAAAAGGAGGAGCTGGGATAGTCTACAGAGGGTCCATGCCAAACGGAACAGACGTAGCGATAAAGCGTTTAGTCGGACAAGGAAGTGGGAGAAACGATTACGGGTTCAAAGCAGAGATAGAAACATTGGGTAGAATCAGACACAGAAACATAATGAGGCTATTGGGTTACGTTTCTAACAAGGACACAAATTTGTTGCTGTATGAGTACATGCCAAATGGTAGTTTAGGAGAATGGCTTCATGGTGCAAAAGGTTGTCATTTGAGTTGGGAAATGAGGTACAAAATTGCAGTGGAAGCTGCTAAAGGACTATGCTATTTGCACCATGATTGTTCACCTCTTATTATTCATAGGGATGTTAAGTCCAATAATATATTGCTAGATGCTGATTTTGAAGCCCATGTTGCTGATTTTGGACTTGCTAAGTTCTTATATGACCCAGGTGCTTCTCAGTCCATGTCCTCTATTGCTGGCTCCTACGGCTACATTGCTCCAGAGTATGCTTATACACTGAAAGTGGATGAGAAAAGCGATGTGTATAGCTTTGGAGTGGTGCTACTGGAGCTGATTATAGGAAGGAAACCAGTGGGCGAGTTTGGAGATGGAGTGGACATTGTTGGATGGATCAATAAAACTGAATCAGAGCTTTATCAGCCCTCGGATAAAGCATTGGTGTCGGCGGTGGTGGACCCGCGACTCACTGGATACCCAATGGCAAGTGTTATCTACATGTTCAACATAGCTATGATGTGTGTGAAAGAAATGGGACCTGCAAGGCCTACCATGAGGGAAGTGGTTCATATGCTCACTAATCCACCTCAGTCTACCACTCAAAACAATCTCATTAATCTTTAG 2931 0.4418 MKSITCYLLVFLCVLFTPCFSITDLDALLKLKESMIGEKVKHNDSLGDWTFSSSDSAHCSFSGVTCDQDNRVIKLNVTQVPLFGKISKEIGALDRLEKLILTMDNLTGELPFEISNLTSLKILNISHNYFSGNFPGNITLRMTKLEVLDAYDNSFAGHLPEEIVRLKELNFLCLAGNFFTGSIPESYSEFQKLEILSINANSLSGKIPKSLSKLKTLKELRLGYNNAYEGGVPPEFGSLKSLRYLEVSNCNLTGEIPPSLGNLENLDSLFLQMNNLTGTIPPELSSMRSLMSLDLSNNDLSGEIPESFSNLKNLTLLNFFQNKFRGSIPAFIGDLPHLETFQIWENNFSFVLPQNLGSNGKFIFFDVTKNHLTGLIPPDLCKSKKLQTVIVTDNFFHGPIPKGIGACKSLLKIRVANNYLDGPVPQGIFQLPSVTIIELGNNRFNGQLPSEVSGANLGILTISNNLFTGRIPASMKNLRSLQTLLLDANQFVGEIPEEVFDLPVLTNFNISGNNLTGVIPTTVSQCRSLTAVDFSRNMLTGDVPKGMKNLKVLSIFNLSHNNISGLIPDEIRFMTSLTTLDLSYNNFTGIVPTGGQFLVFNDRSFFGNPNLCFSHQTSCSSYIFPSRKSHTKVKAIITAIALATAVLLVMLTMHMMRKRKLHIAKAWKLTAFQRLDFKAEEVVECLKEENIIGKGGAGIVYRGSMPNGTDVAIKRLVGQGSGRNDYGFKAEIETLGRIRHRNIMRLLGYVSNKDTNLLLYEYMPNGSLGEWLHGAKGCHLSWEMRYKIAVEAAKGLCYLHHDCSPLIIHRDVKSNNILLDADFEAHVADFGLAKFLYDPGASQSMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIIGRKPVGEFGDGVDIVGWINKTESELYQPSDKALVSAVVDPRLTGYPMASVIYMFNIAMMCVKEMGPARPTMREVVHMLTNPPQSTTQNNLINL 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00862 976 SUPERFAMILY RNI-like 75 429 - -
Vivi7g00862 976 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 227 331 - -
Vivi7g00862 976 Pfam Leucine Rich Repeat 241 263 IPR001611 GO:0005515
Vivi7g00862 976 Pfam Leucine Rich Repeat 290 311 IPR001611 GO:0005515
Vivi7g00862 976 Gene3D Ribonuclease Inhibitor 142 226 IPR032675 -
Vivi7g00862 976 Gene3D Ribonuclease Inhibitor 345 622 IPR032675 -
Vivi7g00862 976 SMART LRR_typ_2 478 502 IPR003591 -
Vivi7g00862 976 SMART LRR_typ_2 142 166 IPR003591 -
Vivi7g00862 976 SMART LRR_typ_2 239 263 IPR003591 -
Vivi7g00862 976 SMART LRR_typ_2 574 597 IPR003591 -
Vivi7g00862 976 SMART LRR_typ_2 550 573 IPR003591 -
Vivi7g00862 976 SMART LRR_typ_2 335 359 IPR003591 -
Vivi7g00862 976 SMART LRR_typ_2 287 310 IPR003591 -
Vivi7g00862 976 SMART LRR_typ_2 431 455 IPR003591 -
Vivi7g00862 976 Pfam Leucine rich repeat 538 587 IPR001611 GO:0005515
Vivi7g00862 976 FunFam Leucine-rich repeat receptor-like protein kinase 22 185 - -
Vivi7g00862 976 Gene3D Ribonuclease Inhibitor 23 141 IPR032675 -
Vivi7g00862 976 Pfam Leucine rich repeat N-terminal domain 23 67 IPR013210 -
Vivi7g00862 976 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 655 762 - -
Vivi7g00862 976 SUPERFAMILY L domain-like 385 616 - -
Vivi7g00862 976 ProSitePatterns Serine/Threonine protein kinases active-site signature. 807 819 IPR008271 GO:0004672|GO:0006468
Vivi7g00862 976 SUPERFAMILY Protein kinase-like (PK-like) 679 961 IPR011009 -
Vivi7g00862 976 SMART serkin_6 686 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00862 976 ProSiteProfiles Protein kinase domain profile. 686 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00862 976 Gene3D Transferase(Phosphotransferase) domain 1 763 974 - -
Vivi7g00862 976 Gene3D Phosphorylase Kinase; domain 1 651 762 - -
Vivi7g00862 976 Gene3D Ribonuclease Inhibitor 227 332 IPR032675 -
Vivi7g00862 976 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 339 962 - -
Vivi7g00862 976 FunFam LRR receptor-like serine/threonine-protein kinase EFR 332 622 - -
Vivi7g00862 976 Pfam Protein tyrosine and serine/threonine kinase 687 961 IPR001245 GO:0004672|GO:0006468
Vivi7g00862 976 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 763 975 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00862 Vivi-Chr7 48379525 48383056 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00862 17 974 Receptor kinase-like Gene Family AT1G75820 62.526 0.0 1221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vivi7g00862 PK_Tyr_Ser-Thr 2.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00862 - - lja:Lj3g3v3375770.1 1501.88