Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00849 ATGGCATCAAGATCCTATGCTAATCTCTTAGATTTAGCTGGTGGAGGAGACTTGCTTGATATTCCTCACACCCCAAGAACTCTTCCAAGGGTTATGACTGTTCCTGGAATTATTTCTGACCTGGATGGTGAATCAGACGTTAGTTCCTCTGGATGTCGGGAGCGGAAAATCATTGTGGCAAACATGTTGCCTCTGCAGGCTAAAAGAGATATTGATACTGCTAAATGGTGTTTCAGTTGGGATGAAGATTCAATTCTATTACAATTAAAAGATGGTTTTTCTTCTGATACTGAGGTGATCTATGTGGGTTCTCTCAAAGCTGAGATAGATGCTAGTGAGCAGGATGAAGTTGCTCAGAGATTACTGGATGATTTTAATTGTGTGCCTACCTTTCTACCACATGATCTGCAGAAAAAGTTCTATCTTGGTTTTTGTAAGCAGCAGCTCTGGCCCCTGTTCCATTATATGCTACCCATATGCTCAGATCACGGTGATCGCTTTGACCGTGTGCTTTGGCAAGCTTATGTTTCTGCTAACAAAATATTTGCAGACAAAGTCATGGAAGTGATTAATCCCGATGATGATTTTGTTTGGGTTCATGATTATCACTTGATGGTTTTGCCTACTTTCTTGAGGAAACGATTTAATCGAGTTAAACTTGGGTTCTTTCTTCACAGTCCTTTCCCATCTTCTGAAATTTACCGAACTTTGCCTGTAAGGGATGAAATTCTCAAAGGATTGTTGAATTCAGATTTAATTGGTTTTCATACATTTGATTATGCTCGCCACTTTCTTTCATGCTGCAGTAGAATGCTAGGCTTGGATTATGAATCTAAGCGAGGGCATATAGGACTTGATTACTTTGGCCGCACTATATTTATCAAAATTTTGCCCGTAGGCATTCATATGGGTAGGCTTGATTCTGTATTAAATCTTCCTTCTACATCCACTAAGCTAAAAGAGATCCAGGAAGAGTTTAAGGATAGAAAAGTTATTCTTGGGGTTGACGACATGGATATTTTTAAAGGTATCAATCTGAAATTTCTAGCAGTGGAGCAGCTGCTGCAGCAGAATCCAGATTTGCAGGGAAAAGTTGTCCTTGTTCAAATTGTAAATCCCGCAAGGGGTTCAGGGAAGGATGTTCAGGAAGCAAAGAAGGAAGCATATTTAATTGCTCAGAGGATCAATGCTAATTATGGTTCTAGTCATTATCAACCAGTCATTATCATTGACCGCCCTGTTCCTCGCTTTGAGAAGAGTGCCTATTATGCTGTAGCAGAGTGCTGCATTGTCAATGCTGTGAGAGATGGGATGAACTTAGTCCCGTACAAATATATTGTCTGCAGACAGGGAACTGCAAAGCTGGATGAAGCTATGGGTAGGCAGAGTGATTCTCCTCGTACAAGCATGCTTGTTGTATCTGAGTTCATTGGCTGTTCACCTTCTCTGAGTGGGGCTATCAGGGTCAATCCCTGGGATATAGATGCAGTTGCTGATGCTCTGAATTTGGCTCTCACCATGAGAGATTCGGAGAAAAAGTTGCGCCATGAGAAACACTATCGTTATGTAAGTTCTCACGATGTGGCATATTGGGCACGCAGTTTTATGCAGGATTTGGAGAGAGCCTGCAAAGATCATTACACTAAAAGGTGCTGGGGAATTGGTTTGGGGTTGGGATTCAGAGTTATTTCTCTTTCTCATGGTTTTAGAAAGCTGTCCATTGACCATATTGTATCAGCTTACAAAAGAACCAAAAGAAGGGCCATCTTTCTTGATTATGATGGCACTATTGTACCACAAACTTCCATTAATAAAACCCCCAGCGCTGAAGTCATATCTGTGCTTAATGCTCTGTGTAATGATAGCAAGAATATTGTATTCATTGTTAGTGGAAGGGCAAGAGATTCTCTGAGTGACTGGTTTGCTTCATGCAAAATGCTGGGACTTGCAGCTGAACATGGGTACTTTCTAAGGTGGAATAGCGACTCCGAATGGGAAACCAGTCACTTGTCTGCGGACCTTGATTGGAAACAGATAGTGGAGCCTGTCATGCAGTCATATACAGAAGCAACTGATGGATCTAATATTGAAATTAAGGAAAGTGCTTTGGTGTGGCATCATCAAGATGCAGACCCTGATTTTGGTTCCTGTCAAGCCAAAGAATTGTTGGATCACTTGGAAAGTGTTCTTGCTAATGAACCGGCACTTGTTAAGAGAGGCCAGCATATTGTTGAAGTTAAGCCACAGGGAGTGACCAAAGGGTTGGTAGCTGAGAAAGTTCTTTTGAATATGGTTAATGGTGGCAATCCACCAGATTTCGTGATGTGCATAGGAGATGATAGGTCTGATGAAGACATGTTTGAAAGCATTTTGAGTACAGTCTCGTGCCCATCTTTACCATCCGCCCCAGAGATTTTTGCCTGCACTGTTGGAAGAAAACCGAGCAAGGCCAAGTATTTTCTTGATGATACTGCCGATGTCGTGAGGTTACTTCAAGGCCTTGCATCCTCATCAAATCCAAAGCCCAAGCATCATCATCATGCCCAATTCCAGGTATCTTTTGAGAGCATAGTTTCATAG 2580 0.4178 MASRSYANLLDLAGGGDLLDIPHTPRTLPRVMTVPGIISDLDGESDVSSSGCRERKIIVANMLPLQAKRDIDTAKWCFSWDEDSILLQLKDGFSSDTEVIYVGSLKAEIDASEQDEVAQRLLDDFNCVPTFLPHDLQKKFYLGFCKQQLWPLFHYMLPICSDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPVRDEILKGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTIFIKILPVGIHMGRLDSVLNLPSTSTKLKEIQEEFKDRKVILGVDDMDIFKGINLKFLAVEQLLQQNPDLQGKVVLVQIVNPARGSGKDVQEAKKEAYLIAQRINANYGSSHYQPVIIIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTAKLDEAMGRQSDSPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADALNLALTMRDSEKKLRHEKHYRYVSSHDVAYWARSFMQDLERACKDHYTKRCWGIGLGLGFRVISLSHGFRKLSIDHIVSAYKRTKRRAIFLDYDGTIVPQTSINKTPSAEVISVLNALCNDSKNIVFIVSGRARDSLSDWFASCKMLGLAAEHGYFLRWNSDSEWETSHLSADLDWKQIVEPVMQSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPALVKRGQHIVEVKPQGVTKGLVAEKVLLNMVNGGNPPDFVMCIGDDRSDEDMFESILSTVSCPSLPSAPEIFACTVGRKPSKAKYFLDDTADVVRLLQGLASSSNPKPKHHHHAQFQVSFESIVS 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00849 859 FunFam Alpha,alpha-trehalose-phosphate synthase 309 524 - -
Vivi7g00849 859 CDD HAD_TPP 588 829 - -
Vivi7g00849 859 Pfam Glycosyltransferase family 20 55 540 IPR001830 GO:0003824|GO:0005992
Vivi7g00849 859 NCBIfam HAD-IIB family hydrolase 588 789 IPR006379 -
Vivi7g00849 859 Gene3D - 586 704 IPR023214 -
Vivi7g00849 859 Gene3D - 716 850 IPR023214 -
Vivi7g00849 859 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 29 836 IPR001830 GO:0003824|GO:0005992
Vivi7g00849 859 NCBIfam trehalose-phosphatase 585 834 IPR003337 GO:0003824|GO:0005992
Vivi7g00849 859 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 48 307 - -
Vivi7g00849 859 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 55 544 - -
Vivi7g00849 859 Gene3D Glycogen Phosphorylase B; 49 307 - -
Vivi7g00849 859 CDD GT20_TPS 55 540 IPR001830 GO:0003824|GO:0005992
Vivi7g00849 859 Gene3D Glycogen Phosphorylase B; 308 524 - -
Vivi7g00849 859 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 716 847 - -
Vivi7g00849 859 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 586 703 - -
Vivi7g00849 859 SUPERFAMILY HAD-like 587 834 IPR036412 -
Vivi7g00849 859 Pfam Trehalose-phosphatase 590 824 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00849 Vivi-Chr7 47783548 47788584 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00849 1 858 Trehalose Biosynthesis Gene Families AT1G23870 75.230 0.0 1384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00849 K16055 - gmx:100775779 1564.67