Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00828 ATGGCACCACCAAAGCGACTCCGCATCACTCCGCTCGACGATCCACCCACCGCCTCCTCTTCCTCCGATGACGACCAACCACCTTCCTCCAAAAAGCCAGAAGATGAAGTAGTCGATGAAGAAGAAGATTCAGAAAAAGCGGGAGAAGAAACTGAAGAAGATGAAGATGAAGGTTCTTCATCCGAAGAAGAACAAGTTCAACCTCCTTCCAAAAATCCTCCACCTTCTACCCCAATCTCAAACCCTAAACCCGACTCCGGCTCCGAATCGGAATCTGGTTCCGAATCTGATTCTGAACAAGAACCTACTCCACCTAACGCCAAAGTCAAGCCTCTCGCATCAAAGCCCATGAAAGCCCAACCACAAGCCCAAACCCAATCTACTCCTGTACCGGCCAGATCTGGAACAAAGCGTGCAAACGAAAACGGTTCCAAACCTGCTAAGAAGAAAACAACCGGCGCCGGCGGTGGTTCTGAAAACGAGGCGGATGGAGACGGTGACGTGAAAATGACAGGGGAAGACTCAAAGAAGATGAATCAGAGAGTCTTCACTGAAGGAGACGAGATTGCCATTCTGAAAGGTCTTGCTGACTTCATTTCCAAAACCGGAAAGGATCCGATGAAGGAACTGGTCGAATTTCATAGTTTTGTGAAGAAATCTATTCACGGGGATGTGACTACCGAACAGCTGAAGCGAAAGGTCCGTGGTTTGAAGATGAAGTTCAAAGACGGTGGTGGTTTCACTAAAGAGCATGATAAGAAAGCTTTTGAACTTTCCAAAAAGGTTTGGGGCAATACTGAAGGCAATAATAACGTAGGCAATGAAGGGGAAGAAAATGGAAAAGTGAATGAGAAAACTCCGAAGAGTACTAAGAAGGAAGCTCCGGTGAGAAACAATGGTTCTGCTAAGAAAGAAAAAGTTGTCAATGGTGCTGGAAAAGATGAGGGTGGTGTTGATAGAAGCTTGGCTTTGAGTGAAATGTGTAGATTTGGTGAAGCTGCACCCTTGAATGCTATGGAAAGGGGAATAGGATTGTTGGAGGAGTCCATGGTTGATGAGTTTAACGAGGGATGGAGAAAGGTTCAAATTGCGGAGATGGAACTGTTAGTGACCCGGCGGCAACTGCTTACGGATCAGGCTAGGATAGCATTGGACGCGTTGAAGAAGACGCGTTGA 1176 0.4685 MAPPKRLRITPLDDPPTASSSSDDDQPPSSKKPEDEVVDEEEDSEKAGEETEEDEDEGSSSEEEQVQPPSKNPPPSTPISNPKPDSGSESESGSESDSEQEPTPPNAKVKPLASKPMKAQPQAQTQSTPVPARSGTKRANENGSKPAKKKTTGAGGGSENEADGDGDVKMTGEDSKKMNQRVFTEGDEIAILKGLADFISKTGKDPMKELVEFHSFVKKSIHGDVTTEQLKRKVRGLKMKFKDGGGFTKEHDKKAFELSKKVWGNTEGNNNVGNEGEENGKVNEKTPKSTKKEAPVRNNGSAKKEKVVNGAGKDEGGVDRSLALSEMCRFGEAAPLNAMERGIGLLEESMVDEFNEGWRKVQIAEMELLVTRRQLLTDQARIALDALKKTR 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00828 391 MobiDBLite consensus disorder prediction 260 313 - -
Vivi7g00828 391 MobiDBLite consensus disorder prediction 162 178 - -
Vivi7g00828 391 MobiDBLite consensus disorder prediction 82 103 - -
Vivi7g00828 391 PANTHER BNAANNG10740D PROTEIN-RELATED 82 386 IPR007592 GO:0006355
Vivi7g00828 391 MobiDBLite consensus disorder prediction 36 62 - -
Vivi7g00828 391 MobiDBLite consensus disorder prediction 1 178 - -
Vivi7g00828 391 MobiDBLite consensus disorder prediction 118 141 - -
Vivi7g00828 391 MobiDBLite consensus disorder prediction 278 300 - -
Vivi7g00828 391 Pfam Protein of unknown function, DUF573 180 264 IPR007592 GO:0006355
Vivi7g00828 391 MobiDBLite consensus disorder prediction 263 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00828 Vivi-Chr7 47067383 47068816 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00828 8 388 GeBP Transcription Factor Family AT1G61730 29.197 5.01e-27 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Vivi7g00828 DUF573 1.6e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00828 - - vvo:131633905 535.413