Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00815 ATGCCGTTTGGTTTGGTGTCGGCATGGAACAAGCGGCGAAGAAGCAAGTCTGAAGATCTTTCAGACCCTTGGATTTATAAACCGGCCGAGTTTTGGCAACTTGAAGATCAAACACCGCAATCTAGTAATAGGATGCATGGATCATCTGTTTTCACACTCAAAGAGATGGAGGATGCAACTTGTTCATTCAGTGATGATAATCTTGTTGGGAAAGGAGGGTTTGGTAGAGTCTATAGAGGCATTTTGAAGTCAGGAGAGGTTGTAGCTATCAAGAAAATGGAATTGGAAGCAATTAAAGCCGCAGAAGGAGAGCGCGAATTTCGCGTGGAAGTTGACATTTTGAGCCTGCTAGACCACCCGAATCTTGTTTCTTTGATAGGTTATTGTGCTGACGGAAAGCATAGATTCTTAGTATATGAATACATGCATAATGGAAACCTGCAAGATCATTTGAATGGTTTGTCATGCACCCAAAATCTACCCGATCTCATAACTTCCTACATTACATGTAACCAATCTTTAATTTTAGGAATGAGGGAAAGGAAAATGGACTGGCCTCAAAGATTAAGAGTGGCATTAGGAGCTGCAAAAGGCCTTGCTTATCTCCACTCAAGCTCTTGTGTTGGAATTCCTATTGTTCATAGAGATTTCAAATCCACCAATATTCTTTTAGATGCCAATTTTGAAGCAAAGATATCTGATTTTGGGTTTGCAAAGCTAATGCCAGAAGAACATGAAATACATGAAACTGCTAAAGTGCTTGGTACATTTGGCTATTTTGACCCGGAGTATACATCGACGGGAAAATTGACTCTACAAAGCGATGTTTATGCTTTCGGTGTTGTTCTTCTAGAGCTCTTGACAGGACGTCGAGCTATAGATCTAAACCAAGGTCCGAATGATCAAAACCTTGTACTACAAGTAAGGCACTTACTGAATGACCGCAAGATGCTCCGTAAGGTGATTGATCCAGAGATGACTAGAAATTCATACACCATGGAATCGATATTCATGTTTGCGAATCTTGCGTCACAATGTGTTCGTGCGGAGAGTCATGTGAGACCTTCAATGATTGATTGTGTTAAAGAAATTCAAATGATTATCTATAGAAATGCAAAAGGGTTGGGAATGGTTATGCATAGTTTGAGGATGCTCTAG 1158 0.4041 MPFGLVSAWNKRRRSKSEDLSDPWIYKPAEFWQLEDQTPQSSNRMHGSSVFTLKEMEDATCSFSDDNLVGKGGFGRVYRGILKSGEVVAIKKMELEAIKAAEGEREFRVEVDILSLLDHPNLVSLIGYCADGKHRFLVYEYMHNGNLQDHLNGLSCTQNLPDLITSYITCNQSLILGMRERKMDWPQRLRVALGAAKGLAYLHSSSCVGIPIVHRDFKSTNILLDANFEAKISDFGFAKLMPEEHEIHETAKVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAIDLNQGPNDQNLVLQVRHLLNDRKMLRKVIDPEMTRNSYTMESIFMFANLASQCVRAESHVRPSMIDCVKEIQMIIYRNAKGLGMVMHSLRML 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00815 385 FunFam receptor-like serine/threonine-protein kinase NCRK 142 376 - -
Vivi7g00815 385 CDD STKc_IRAK 69 365 - -
Vivi7g00815 385 PIRSF ILK 36 160 - -
Vivi7g00815 385 PIRSF ILK 153 375 - -
Vivi7g00815 385 SUPERFAMILY Protein kinase-like (PK-like) 38 362 IPR011009 -
Vivi7g00815 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Vivi7g00815 385 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
Vivi7g00815 385 Gene3D Transferase(Phosphotransferase) domain 1 142 375 - -
Vivi7g00815 385 Gene3D Phosphorylase Kinase; domain 1 30 141 - -
Vivi7g00815 385 PANTHER OS01G0750732 PROTEIN 38 369 - -
Vivi7g00815 385 Pfam Protein kinase domain 64 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00815 385 FunFam serine/threonine-protein kinase PBS1-like 31 141 - -
Vivi7g00815 385 ProSiteProfiles Protein kinase domain profile. 63 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00815 Vivi-Chr7 46678797 46680998 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00815 46 368 Receptor kinase-like Gene Family AT3G58690 44.582 3.88e-87 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Vivi7g00815 Pkinase 2.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00815 - - gmx:100820613 632.098