Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00811 ATGAAAGCTAAGAGTGGACTCTTTGCAGGGTCTCTTAACAGCAATGAACTTGTTATCATCCAAGAACACAATGAGCCTAAGACAGTGAAGAACTTGGACGGTCAAGTATGTGAGATATGCGGTGATTCTGTAGGTCGTACAGTGGATGGAGATTTGTTTGTAGCTTGTGAAGAGTGTGGCTTCCCTGTCTGCAGACCATGTTATGAGTATGAGAGAAGAGAAGGCACACAAGTTTGCCCTCAGTGCCATACAAGATACAAGCGTATCAAAGGTAGTCCGAGAGTGGTGGGAGATGAAGACGAAGAAGATGTGGATGATATTGAACAAGAATTTAAAATGGAAGAGGAAAAGTACAAGCTTATGCATGAAGAGGATATGGATAGTAGAGATGATGACGAGAGTACTAAATATAGAGAGCAGCCCGGTGGTCCATATTTAGATCAGAAGGCGAAAACAGATGAGTGGAAGTCGCAGCAAGGCAATCTGTTGATTGAAACTGATGCAGTTGATCCTGAAAAGGCCATGAAAGATGAAACCAGACAGCCACTTTCAAGGAAAGTGGCAATACCTTCAGGAAAACTGAGTCCTTATAGAATGATGGTTGTGGCTAGGCTAATCCTTCTAATACTCTTCTTTGAGTACAGAATATTCCATCCTGTACCTGAAGCAATTGGACTATGGTTCATATCAGTATCATGTGAAATCTGGCTTGCATTATCATGGATGGTTGATCAGATTCCTAAATGGTTCCCTATTGATCGCGAAACATATCTCGACCGTCTTTCAGTCAGGTTTGAACCGGAAAACAAGCCGAATATGCTTTCTCCAATAGATATCTTTGTAACAACGGTAGATCCAATCAAGGAACCACCCCTTGTTACAGCAAATACTATTCTTTCAATTTTGGCACTAGATTATCCTGCGCGCAAAATTTCATGCTATGTTTCTGATGACGGTGCTTCCATGCTCACCTTCGAAGCTCTTCAAGAAACGGCTGAATTTGCGCAAAAATGGGTACCTTTCTGTAAACAATTCTCTGCGGAACCTCGAGCTCCCGAGAAGTACTTCTCTGAGAAGATAGACTTTCTGAAGGACAAGGTTCAAACCACATATGTAAAAGAACGCCGAACTATGAAGAGAGAATATGAAGAATTTAAGGTCAGAATAAATGCACTTGTGGCTAAATCCATGAGAGTTCCATCCGGAGGATGGTGCATGAAAGACGAAACACCGTGGCCAGGAAACAATTCAAAAGATCATCCAAGTATGATTCAAATTCTACTTGGTCATAATGGTGGTGACAATGAAGGGAATGAACTTCCATCTCTTGTCTACATCTCTAGAGAGAAAAGGCCTGCATTTCAACATCACACAAAAGCTGGTGCAATGAACGCGCTGCTTCGCGTATCAGCAGTGTTGAGCAATGCTCCTTTTGTGCTCAACTTGGATTGCAATCATTATGTGAACAACAGCAAGGTTGTGAGAGAAGCCATGTGTTTCTTTATGGACATACAACTTGGGAATAGTATAGCTTTTGTTCAGTTTCCTCTAAGATTCGATAGCCTTGATAAGAATGACCGATACGCCAACAAAAACACCATTTTATTTGATATTACCCTGAGGTGTCTAGATGGAATTCAAGGACCTGTTTATATTGGATCAGGTTGTATATTCAGAAGGAAAGCTTTAAATGGCTTTGAACCTCCTAAGACAACGAAACGCTCTCAAGTCGTACAAGTTCACTCAAAACAGGATGAAAATGAAGAGGATGCAAGCATCATAGAAGCAATTGATGAAGACAAGCAGCTATTGCAATCAGATATGAACACTGAAGATAAATTTGGAAAGTCTACACTCTTCATGAATTCTTCATTATCAGAAGAAGGTGGTGTAGATCCTTCTTCAACTCAGGAAGCCTTGCTTAAAGAAGCCATTCATGTCATGAGCTGTAGTTACGAAGACCGAACTCTTTGGGGATACGAGGTTGGTATGAGCTATGGATCTATAGCCGCCGATACTCTAACAAGTTTGAAAATGCATACTCGCGGATGGAGATCGGTATACTGCATGCCAAAGAGAGCAGCATTTAGGGGAACAGCACCAATCAATCTTACAGAAAGACTTAACCAAGTTCTTAGATGGGCAGTAGGATCGCTCGAAATCCTATTCAGCCGCCACTGTCCATTGTGGTACGGTTTTAAAGAAGGAAGACTCAAGGTTCTCCAGAGGATCGCCTATATTAACAGCACCGTCTACCCTTTTAGTGCATTACCTCTCATCATCTATTGTATCGTTCCTGCCGTCTGCTTGCTTACAGATAAATTCATCACACCATCGGTAGGAACTTTTGCGAGTCTAGTATTCATTTCTCTATTCATCTCAATCTTCGCATCGGCTATTCTTGAACTGAGATGGAGTGGAGTTAGTCTCGAGGAATGGTGGAGAAATCAACAGTTTTGGGTGATTGGAAGTGTATCAGCGCACCTCTTTGCAATCGCGCAGCGCCTAATGGGAGGATTCATTGGAAAAATTAATGATCACTTCAGCATTGTATCAAAGGCACCAGACAACGACGGGCAGTTTAACGAGCTCTACACGATTAGATGGACAGCACTACTAATACCTCCAACAACAGTCACAATAATCAACCTTATTGGCATTGTGGCCGGTTTCACAGATGCTATAAATAGCGGTGAACATGAATGGGGACCATTGATTGGGAAACTGTTCTTCTCTTCATGGGTTATTGCTCATCTTTATCCTTTTCTTAAAGGACTAATGGGGAGACAGAATAGAACACCAACTCTTATTGTTATTTGGTCTGTGCTTTTGGCTTCTATATTCTCTTTGGTTTGGGTGAGAATTGATCCTTTTGTGTTGAAAACTAAGGGGCCTGATGTTAAACAGTGTGGGATTAGTTGTTGA 2925 0.4164 MKAKSGLFAGSLNSNELVIIQEHNEPKTVKNLDGQVCEICGDSVGRTVDGDLFVACEECGFPVCRPCYEYERREGTQVCPQCHTRYKRIKGSPRVVGDEDEEDVDDIEQEFKMEEEKYKLMHEEDMDSRDDDESTKYREQPGGPYLDQKAKTDEWKSQQGNLLIETDAVDPEKAMKDETRQPLSRKVAIPSGKLSPYRMMVVARLILLILFFEYRIFHPVPEAIGLWFISVSCEIWLALSWMVDQIPKWFPIDRETYLDRLSVRFEPENKPNMLSPIDIFVTTVDPIKEPPLVTANTILSILALDYPARKISCYVSDDGASMLTFEALQETAEFAQKWVPFCKQFSAEPRAPEKYFSEKIDFLKDKVQTTYVKERRTMKREYEEFKVRINALVAKSMRVPSGGWCMKDETPWPGNNSKDHPSMIQILLGHNGGDNEGNELPSLVYISREKRPAFQHHTKAGAMNALLRVSAVLSNAPFVLNLDCNHYVNNSKVVREAMCFFMDIQLGNSIAFVQFPLRFDSLDKNDRYANKNTILFDITLRCLDGIQGPVYIGSGCIFRRKALNGFEPPKTTKRSQVVQVHSKQDENEEDASIIEAIDEDKQLLQSDMNTEDKFGKSTLFMNSSLSEEGGVDPSSTQEALLKEAIHVMSCSYEDRTLWGYEVGMSYGSIAADTLTSLKMHTRGWRSVYCMPKRAAFRGTAPINLTERLNQVLRWAVGSLEILFSRHCPLWYGFKEGRLKVLQRIAYINSTVYPFSALPLIIYCIVPAVCLLTDKFITPSVGTFASLVFISLFISIFASAILELRWSGVSLEEWWRNQQFWVIGSVSAHLFAIAQRLMGGFIGKINDHFSIVSKAPDNDGQFNELYTIRWTALLIPPTTVTIINLIGIVAGFTDAINSGEHEWGPLIGKLFFSSWVIAHLYPFLKGLMGRQNRTPTLIVIWSVLLASIFSLVWVRIDPFVLKTKGPDVKQCGISC 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00811 974 Pfam Cellulose synthase 277 968 IPR005150 GO:0016020|GO:0016760|GO:0030244
Vivi7g00811 974 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 111 IPR013083 -
Vivi7g00811 974 Coils Coil 375 395 - -
Vivi7g00811 974 CDD mRING-HC-C4C4_CesA 35 85 - -
Vivi7g00811 974 SUPERFAMILY Nucleotide-diphospho-sugar transferases 289 762 IPR029044 -
Vivi7g00811 974 SUPERFAMILY RING/U-box 22 105 - -
Vivi7g00811 974 MobiDBLite consensus disorder prediction 117 138 - -
Vivi7g00811 974 FunFam Cellulose synthase 19 110 - -
Vivi7g00811 974 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 419 572 IPR029044 -
Vivi7g00811 974 ProSiteProfiles Zinc finger RING-type profile. 37 83 IPR001841 -
Vivi7g00811 974 Pfam Zinc-binding RING-finger 27 104 IPR027934 -
Vivi7g00811 974 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 179 941 - -
Vivi7g00811 974 Coils Coil 97 124 - -
Vivi7g00811 974 MobiDBLite consensus disorder prediction 117 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00811 Vivi-Chr7 46612497 46617093 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00811 1 974 Cell Wall Biosynthesis AT5G17420 63.592 0.0 1357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00811 K10999 - gmx:100777270 1590.86