Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00802 ATGAATGAAGAGCCAGCACCGGCTATCCTCATGCCTCACTCTTGCATCTCCGACTGCAACCTCCTCTGCGGAGAAGACACATCCGAAATCCTCACCGGAGATTCAACTGAATACTCCTCCGATCTAGATTCATCATCGCGGTCGTCGTCATTATTGGCGGAGGAGGAAGAGTCCATTGCCGTTTTCATAGAACACGAGCGTAAGTTCGTCCCTGGATTCGATTACCTCTCAAGATTCCAATCTCGTTCTCTAGATGCCAACGCCAGAGAAGAATCAGTTGCATGGATTCTCAAGGTACATGCGTACTATGGTTTTCAGCCGTTGACGGGGTACCTTTCCGTTAACTATATGGATCGGTTTTTGGATTCTAGAACTTTACCGGAATCAAATGGATGGCCTCTGCAACTTCTATCAGTTGCATGTTTATCTTTAGCAGCAAAGATGGAGGAACCCCTGGTTCCTTCTCTCTTGGACCTTCAGGTTGAAGGTGCCAAATACATATTTCAGCCGAGGACGATTTTAAGAATGGAGCTACTTGTTCTAACTGTGTTGGATTGGAGGCTAAGATCAGTCACCCCACTTAGCTTCCTTAGTTTCTTTGCGTGCAAACTAGATTCAACTGGAGCATTCACTGACTTCCTCATTTCACGCGCTACAGAAATCATCTTATCTAATATCCAAGAAGCTGGCTTTCTTGCCTACAGGCCGTCGTGCATTGCTGCAGCTGCAATACTCTCTGCAGCTAATGAAATTCCTAATTGGTCTTTTGTTAAGCCTGAACATGCTGAGTCATGGTGCGAGGGCCTAAGAAAAGAAAAAATTATAGGGTGCTATGAGTTGATGCAAGAAGTTGTGGTAAGCAATAACCAAAGAAATCCACCTAAAGTATTGCCACAGCTGCGAGTTACAACTCGAACCCGAAGGTGGTCCAATGTCTCATCATCATCATCATCTCCATCTTCCTCCTCTTCACTCTCTTTCTCATTATCTTATAAAAAAAGGAAATTAAATAGTAACTGCTTCTGGGTAGATGATGACAAAGGAAACTCCGAGTGA 1056 0.4441 MNEEPAPAILMPHSCISDCNLLCGEDTSEILTGDSTEYSSDLDSSSRSSSLLAEEEESIAVFIEHERKFVPGFDYLSRFQSRSLDANAREESVAWILKVHAYYGFQPLTGYLSVNYMDRFLDSRTLPESNGWPLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYIFQPRTILRMELLVLTVLDWRLRSVTPLSFLSFFACKLDSTGAFTDFLISRATEIILSNIQEAGFLAYRPSCIAAAAILSAANEIPNWSFVKPEHAESWCEGLRKEKIIGCYELMQEVVVSNNQRNPPKVLPQLRVTTRTRRWSNVSSSSSSPSSSSSLSFSLSYKKRKLNSNCFWVDDDKGNSE 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00802 351 SMART cyclin_7 94 182 IPR013763 -
Vivi7g00802 351 CDD CYCLIN_AtCycD-like_rpt2 191 281 - -
Vivi7g00802 351 Pfam Cyclin, C-terminal domain 191 299 IPR004367 -
Vivi7g00802 351 Pfam Cyclin, N-terminal domain 59 188 IPR006671 -
Vivi7g00802 351 FunFam D2/4-type cyclin 72 189 - -
Vivi7g00802 351 SUPERFAMILY Cyclin-like 55 188 IPR036915 -
Vivi7g00802 351 Gene3D - 72 189 - -
Vivi7g00802 351 SUPERFAMILY Cyclin-like 172 286 IPR036915 -
Vivi7g00802 351 CDD CYCLIN_AtCycD-like_rpt1 88 186 - -
Vivi7g00802 351 Gene3D - 62 252 - -
Vivi7g00802 351 PANTHER CYCLINS 38 289 IPR039361 -
Vivi7g00802 351 SMART Cyclin_C_2 191 320 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00802 Vivi-Chr7 46284736 46288428 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00802 11 350 Core Cell Cycle Gene Families AT1G70210 59.942 9.64e-129 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00802 K18810 - gmx:100778578 501.516