Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00796 ATGTGTGTTCGATGCAAATATCAAGTTACAACATGCTGTAATGCTTCTTTTGCATTGAACCTTTTGAAAGAAACAAAGAATCTTTATGATGTGATCCTGATAGAAGCTCAGATGACTGACATGGATTCCAACAATTTCTTGCAACATGTTGCACAACAAATCAAAATTCCAATCATCATGATGAGTGTTGACCAATCAACAAGTCCAAGTCTAGTGATGAAGGCGGTTGAAAAAGGTGCTTGTGGTTATTGGATTAAGCCTTTGAGTGAAGGTCAAATCAAGAACATGTGGCAACATGTTGTAAGAAAAGTTCTGAAAGAAAATAATCAGAATGATCATGTTCTTAAAACGTTGAATGCAAAAGATGAAAAGCCAAGAAAGATTATTAAACTCATGAATGTGCCTGGTTTGACAAGGGAGCAAGTTGCTAGTCATCTACAGTATTTCAAGCACACTCTCGATTATCTTAGAGTTGGAATGACCTGA 486 0.3621 MCVRCKYQVTTCCNASFALNLLKETKNLYDVILIEAQMTDMDSNNFLQHVAQQIKIPIIMMSVDQSTSPSLVMKAVEKGACGYWIKPLSEGQIKNMWQHVVRKVLKENNQNDHVLKTLNAKDEKPRKIIKLMNVPGLTREQVASHLQYFKHTLDYLRVGMT 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00796 161 Gene3D - 88 157 - -
Vivi7g00796 161 Gene3D - 1 87 - -
Vivi7g00796 161 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 144 IPR045279 GO:0009736
Vivi7g00796 161 Pfam Response regulator receiver domain 6 96 IPR001789 GO:0000160
Vivi7g00796 161 NCBIfam myb-like DNA-binding domain, SHAQKYF class 114 149 IPR006447 GO:0003677
Vivi7g00796 161 ProSiteProfiles Response regulatory domain profile. 1 101 IPR001789 GO:0000160
Vivi7g00796 161 SUPERFAMILY CheY-like 4 109 IPR011006 -
Vivi7g00796 161 SUPERFAMILY Homeodomain-like 112 152 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00796 Vivi-Chr7 45938051 45939042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00796 4 153 Response Regulator Gene Family AT4G31920 35.468 9.14e-28 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi7g00796 Response_reg 8.5e-10 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00796 - K14491 vvo:131618972 328.946