Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00746 ATGTCGTCCTCTTCTTCTTCTTTCTCCGGTGGAGGAGCTTTCAGGTTTCGTTGGGACGTGTTTTTGAGCTTCAGAGGTGAAGATACTCGCGAATGCTTCACCAAAAAACTATATGAATCTCTCCATAGTCCAGGTGTTCGTGTTTTCATGGACGACGAAGGCTTGGACCGTGGGGATCGCATAGATATCACTCTTCTTCAAGCCATTGATGACTCTGCTGCTTCCATTGTTATTATCTCTCCAAAGTACGCTGAATCTCATTGGTGTCTCGATGAGCTTGTCAGAATTTTTGAGTGTAAGAGGCTTGTTATTCCCGTTTTCTACCAGGTTGATCCTTCTCATGTTCGGAAACAGTCGGGGCCTTTTCAAAAAGGTTTTACTGATCTTCAAAACAGATTTGATAATGATATGGTTTCCAAGTGGAGAGATTCTATGAAACAACTTGGTGGGCTTGCTGGCTTTGTTTTCAATGACAGTTATGAAGGCGAGCGTGAGAATCTGATACATCTTTTGGTGAAAAGGGTTTTGAAGGAGTTAAGTAATACTCCAATGGTTGTGGCTGAGTTTCTAGTCGGACTCAATGAACGTGTTGACAAGGTGATGAATCTGTTACAACTTCAATCCAATACAGTCAAGGTCTTAGGGTTGTATGGGATGGGAGGTGTTGGTAAGACAACCCTTGCCAAGGCTCTTTTCAACAGTCTCGTGGGTCGTTTTGAACGGAGATGTTTCGTTTCAAATGTGAGACACTCCTCATCTAAAGAGGGTGGTTTGCTTTCTCTTCAAAGCAATATCATTAAAGATCTTTCTTCTAAAGATGGAACTCAGAGTTCTATCGGTGATGTCAATGCTGGTATTGCTACAATAAAAAGAATAGTTCATGAAAATCGAGTTCTGCTAGTGTTAGATGATGTTGATAATGTAAACCAGCTTGATGCTTTGATTGGTCAAAAGGAATGGTTTTACGAAGGAAGCTGTATCATAATTACAACAAGGGATACAAGTGCTTTGCCTGAAAAACATGTCAATAAGTTGTATGAAGTCAAAGAATTGTATGATGAAGAAGCTTTACAGTTATTCAGTTATCATGCTTTCAGGAAAAAGGACCCTCCACCAAGTTTTCTGGAATTTTCAAAGAAAATTGTATCTCGTACAGGAAGAATGCCATTGGCTTTGGAAGTGTTTGGTTGCTTTTTGTGTGAGAGGAGGAGGGTGGAGGAGTGGGAGGATGCTGTTGAGAAGTTGAGAACAATTCAGCCTGGGAATCTTCATAATGTGTTGAAGATAAGTTATGATGGGTTGGATGAACAAGAGAAGTGTATATTCCTTGATATTGCTTGTTTATTTCTTCAAATGAGAATGAAGCGGTGTGATGTGATTGATATATTTAGAGGTTGTGGTTTTAAAGGAGAGATAGCTGTGACAAACCTTGTACAGAAATGCTTAGTCAAAATAGGACATGACAATACCTTGTTGATGCATGATCAAATTAGAGACATGGGAAGACAGATTGTTATGGATGAAAACCATGTTGATCCTGGGATGCGTAGTAGATTGTGGGATCGTGCTGGAATCATGTCCGTTTTCAAGAATACGAAGGGAACAAGATGCATACAAGGAGTTGTACTAGATTTTGAGAAAAGATTAATAATGCGTGAAGCAGAGAAATATAACGACGTTACACTTGATACAAAATCCTTTGAAACAATGGTTAACTTGAGATTGCTTCAGATCAATAATTTGAGTTTGGGAGGCATGTTTCTTCCAGATGAACTGAAATGGCTACAATGGCGAGGATGTCCTTTGGAATGTATTCCTTGGGACACTTTGCCACGTGAACTGGCTGTCCTTGATCTTTCAAATGCCGAGAAAATTAAAAGCTTGAGGGGATTGGAAAGTCACAAGGTACCAGAGAACCTAATGGTCATTAACCTCTCCCACTGCTCCCAACTAGCGGAAATCCCTGATTTATCTAGGTGTCGCAAGCTAGAGAAAATTATTTTGGATAGCTGCATTAATCTAAAAAGGATTCATGAATCAATTGGTGGTTTGACTACCTTGCGTAATTTGAACTTGCGGCATTGTGAAAGCATCACTCAGCTTCCCAGTGATGTATGTGGGCTGAAACATCTGGAGATCCTAGTTCTTTCTAGTTGCACCAAGTTGAAAGCATTACCAAAAAGCATAGGCAAGCTTATATCGCTGAAAACACTTGAGGCTGATGGCACTGCTATAGTTAAGCTGCCTGAGTCCATTTTTCGATTGACCAAACTCGAACGACTTGTTTTAGACCGTTGCTCATATTTGAGAAGACTACCAAAGTGCATTGGAAAGTTATGTTCTTTGCAAGAATTATCTCTTAATCAATCAGGCTTACAAGAATTACCCGACACTGTAGGAACCTTGAAAAATCTTGAGAAGTTAAGTTTGATTGGGTGTGAATCTCTCACGGTAATGCCTGATTCTATAGGAAATCTCGTATCGTTGACAGAACTTTTGGCTTACAACAGTGGAATTAAAGAACTTCCTTCCACCATTAGTTCTTTATCGTATCTGAGGATGTTATCAGTTGGAAACTGTAAACATCTCAGTAAATTGCCTGACTCAATGAAAACTTTGGCTTCAATTACTGAACTTAAGTTAAACGGAACACCTATCAAATATCTTCCAGAGCAAATTGGAGACATGAAACAGCTAATGATACTTGATATTGGAAATTGCAGCAATCTTGAATCATTACCAGAATCCATTGGCCACCTAGGATCTCTTACTACATTGAACATAGACAATGGAAATATTAAAGAATTACCAACGTCGATTGGATTATTGGAAAATCTTGATACCTTAACATTGAACAAATGTAGAATGCTTAAAAAGCTCCCAGCTTCTATTGGAAACTTGAAATCTCTAAGTCACTTAATGATAGAGGAAACAGCTATGTCAGACTTGCCTGAAAGCTTCGGTATGCTCTCAAACTTGAGATCACTTAGAATGGCAAAGAGGCCTACTTTAGTTCCCATATCTGTGGAGAAAAATGGTTCTTTTGTGATACCGTCTTCTTTCTGTAATCTGACCTTGCTATATGAGTTCGATGCTCGTGCCTGGGGATTATCTGGGAAAATTCCTGATGAATTCGAGAAGCTATCATTAATAGAGACTTTAGATTTGGGCCAAAACAATTTCCACAGCCTTCCTTCCAGTTTGAAAGGTCTTTCCTCTCTTAAGAAACTCTCACTGCCAAATTGCACGGAGCTGACTTCTCTCCCCTCACTTCCTTCAAGCTTGATCGAGCTAAATGTTGACAATTGCTACGCATTAGAAAGTATACACAACATGTCAAATTTAGAGAGGTTGGAGGAGTTGAAACTCACAAACTGTGAGGAAGTGGTGGATATTCCAGGTCTTGAATGCTTGAAGTCCTTGAGAAGATTGTACCTGAGTGGTTGCAATGAATGTTCCTCCAAAGTACGCAAAAGACTTTCAAAGGTTGCACTGAGAAATTTTCAGAACTTGAGTATGCCAGGAACTAAGTTACCTGAATGGTTTTCGGGAGAAACTGTCGGCTTTTCCAAGCGCAAAAATCTTGAGCTAACAGGTGTAGTTGTAGGTGTCGTTTTCTCAATTAACCATAACAAAAAGAATATTCAAACACATGGAGTGTTTGACGTTCAAGCAAATGTTCTCAAATCTGGCAAACTTACTCTTAGTTCAGGGCTATACATAGCCGGAGTGCCAAGGACAGATGAACCACACATATACTTGGGAAGGTACCATGATTACCATGCATTGGTATCCGATTTAAAAGATGCTGATACAGTTAGTGTGACAAAGAGGAGTCCTCCTTTTGATGAGAGGTTTGAATTGATAAAATGTGGAATTCATTTAATCTTTGAAGGGGGTGATGATTATGAGGGAGACGAAGAATCGTTGGACAAAGGCTTACAATCTGTCTCAGAAAGGATGGCCAGGTTTTTTAACACTTATGAAGAAGTTGTTGATAACACTTATGATGAAGTTGTTGATGCAACTGAGAGTGAAGATGAGTGTCAACATGAATAG 4059 0.3949 MSSSSSSFSGGGAFRFRWDVFLSFRGEDTRECFTKKLYESLHSPGVRVFMDDEGLDRGDRIDITLLQAIDDSAASIVIISPKYAESHWCLDELVRIFECKRLVIPVFYQVDPSHVRKQSGPFQKGFTDLQNRFDNDMVSKWRDSMKQLGGLAGFVFNDSYEGERENLIHLLVKRVLKELSNTPMVVAEFLVGLNERVDKVMNLLQLQSNTVKVLGLYGMGGVGKTTLAKALFNSLVGRFERRCFVSNVRHSSSKEGGLLSLQSNIIKDLSSKDGTQSSIGDVNAGIATIKRIVHENRVLLVLDDVDNVNQLDALIGQKEWFYEGSCIIITTRDTSALPEKHVNKLYEVKELYDEEALQLFSYHAFRKKDPPPSFLEFSKKIVSRTGRMPLALEVFGCFLCERRRVEEWEDAVEKLRTIQPGNLHNVLKISYDGLDEQEKCIFLDIACLFLQMRMKRCDVIDIFRGCGFKGEIAVTNLVQKCLVKIGHDNTLLMHDQIRDMGRQIVMDENHVDPGMRSRLWDRAGIMSVFKNTKGTRCIQGVVLDFEKRLIMREAEKYNDVTLDTKSFETMVNLRLLQINNLSLGGMFLPDELKWLQWRGCPLECIPWDTLPRELAVLDLSNAEKIKSLRGLESHKVPENLMVINLSHCSQLAEIPDLSRCRKLEKIILDSCINLKRIHESIGGLTTLRNLNLRHCESITQLPSDVCGLKHLEILVLSSCTKLKALPKSIGKLISLKTLEADGTAIVKLPESIFRLTKLERLVLDRCSYLRRLPKCIGKLCSLQELSLNQSGLQELPDTVGTLKNLEKLSLIGCESLTVMPDSIGNLVSLTELLAYNSGIKELPSTISSLSYLRMLSVGNCKHLSKLPDSMKTLASITELKLNGTPIKYLPEQIGDMKQLMILDIGNCSNLESLPESIGHLGSLTTLNIDNGNIKELPTSIGLLENLDTLTLNKCRMLKKLPASIGNLKSLSHLMIEETAMSDLPESFGMLSNLRSLRMAKRPTLVPISVEKNGSFVIPSSFCNLTLLYEFDARAWGLSGKIPDEFEKLSLIETLDLGQNNFHSLPSSLKGLSSLKKLSLPNCTELTSLPSLPSSLIELNVDNCYALESIHNMSNLERLEELKLTNCEEVVDIPGLECLKSLRRLYLSGCNECSSKVRKRLSKVALRNFQNLSMPGTKLPEWFSGETVGFSKRKNLELTGVVVGVVFSINHNKKNIQTHGVFDVQANVLKSGKLTLSSGLYIAGVPRTDEPHIYLGRYHDYHALVSDLKDADTVSVTKRSPPFDERFELIKCGIHLIFEGGDDYEGDEESLDKGLQSVSERMARFFNTYEEVVDNTYDEVVDATESEDECQHE 1352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00746 1352 Gene3D Ribonuclease Inhibitor 553 725 IPR032675 -
Vivi7g00746 1352 SMART LRR_typ_2 732 755 IPR003591 -
Vivi7g00746 1352 SMART LRR_typ_2 826 849 IPR003591 -
Vivi7g00746 1352 SMART LRR_typ_2 1048 1070 IPR003591 -
Vivi7g00746 1352 SMART LRR_typ_2 684 708 IPR003591 -
Vivi7g00746 1352 SMART LRR_typ_2 779 802 IPR003591 -
Vivi7g00746 1352 SMART LRR_typ_2 873 896 IPR003591 -
Vivi7g00746 1352 SMART LRR_typ_2 920 943 IPR003591 -
Vivi7g00746 1352 SMART till_3 17 151 IPR000157 GO:0007165
Vivi7g00746 1352 Pfam NB-ARC domain 195 423 IPR002182 GO:0043531
Vivi7g00746 1352 Gene3D - 350 435 IPR042197 -
Vivi7g00746 1352 PRINTS Disease resistance protein signature 292 306 - -
Vivi7g00746 1352 PRINTS Disease resistance protein signature 213 228 - -
Vivi7g00746 1352 PRINTS Disease resistance protein signature 385 399 - -
Vivi7g00746 1352 PRINTS Disease resistance protein signature 894 910 - -
Vivi7g00746 1352 SUPERFAMILY L domain-like 493 907 - -
Vivi7g00746 1352 SMART LRR_CC_2 1138 1171 IPR006553 -
Vivi7g00746 1352 SMART LRR_CC_2 802 829 IPR006553 -
Vivi7g00746 1352 SMART LRR_CC_2 849 876 IPR006553 -
Vivi7g00746 1352 SMART LRR_CC_2 684 711 IPR006553 -
Vivi7g00746 1352 SMART LRR_CC_2 896 923 IPR006553 -
Vivi7g00746 1352 SMART LRR_CC_2 1071 1101 IPR006553 -
Vivi7g00746 1352 FunFam Disease resistance protein (TIR-NBS-LRR class) 15 181 - -
Vivi7g00746 1352 Gene3D - 176 344 IPR027417 -
Vivi7g00746 1352 Pfam TIR domain 18 182 IPR000157 GO:0007165
Vivi7g00746 1352 Gene3D Ribonuclease Inhibitor 726 998 IPR032675 -
Vivi7g00746 1352 ProSiteProfiles TIR domain profile. 16 176 IPR000157 GO:0007165
Vivi7g00746 1352 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 774 IPR044974 GO:0006952
Vivi7g00746 1352 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 153 IPR035897 -
Vivi7g00746 1352 SUPERFAMILY L domain-like 873 1177 - -
Vivi7g00746 1352 Gene3D - 15 175 IPR035897 -
Vivi7g00746 1352 Gene3D Ribonuclease Inhibitor 999 1200 IPR032675 -
Vivi7g00746 1352 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 445 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00746 Vivi-Chr7 43506901 43513415 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00746 18 855 WRKY Transcription Factor Family AT4G12020 30.000 8.87e-79 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00746 - - mtr:11408681 1993.78