Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00744 ATGTCGTCCTCTTCTTCTTCTTTCTCCGGTGGAGGAGCTTTCAGGTTTCGTTGGGACGTGTTTTTGAGCTTCAGAGGTGAAGATACTCGCGAATGCTTCACCAAAAAACTATATGAATCTCTCCATAGTCCAGGTGTTCGTGTTTTCATGGACGACGAAGGCTTGGACCGTGGGGATCGCATAGATATCACTCTTCTTCAAGCCATTGATGACTCTGCTGCTTCCATTGTTATTATCTCTCCAAAGTACGCTGAATCTCATTGGTGTCTCGATGAGCTTGTCAGAATTTTTGAGTGTAAGAGGCTTGTTATTCCCGTTTTCTACCAGGTTGATCCTTCTCATGTTCGGAAACAGTCGGGGCCTTTTCAAAAAGGTTTTACTGATCTTCAAAACAGATTTGATAATGATATGGTTTCCAAGTGGAGAGATTCTATGAAACAACTTGGTGGGCTTGCTGGCTTTGTTTTCAATGACAGTTATGAAGGCGAGCGTGAGAATCTGATACATCTTTTGGTGAAAAGGGTTTTGAAGGAGTTAAGTAATACTCCAATGGTTGTGGCTGAGTTTCTAGTCGGACTCAATGAACGTGTTGACAAGGTGATGAATCTGTTACAACTTCAATCCAATACAGTCAAGGTCTTAGGGTTGTATGGGATGGGAGGTGTTGGTAAGACAACCCTTGCCAAGGCTCTTTTCAACAGTCTCGTGGGTCGTTTTGAACGGAGATGTTTCGTTTCAAATGTGAGACACTCCTCATCTAAAGAGGGTGGTTTGCTTTCTCTTCAAAGCAATATCATTAAAGATCTTTCTTCTAAAGATGGAACTCAGAGTTCTATCGGTGATGTCAATGCTGGTATTGCTACAATAAAAAGAATAGTTCATGAAAATCGAGTTCTGCTAGTGTTAGATGATGTTGATAATGTAAACCAGCTTGATGCTTTGATTGGTCAAAAGGAATGGTTTTACGAAGGAAGCTGTATCATAATTACAACAAGGGATACAAGTGCTTTGCCTGAAAAACATGTCAATAAGTTGTATGAAGTCAAAGAATTGTATGATGAAGAAGCTTTACAGTTATTCAGTTATCATGCTTTCAGGAAAAAGGACCCTCCACCAAGTTTTCTGGAATTTTCAAAGAAAATTGTATCTCGTACAGGAAGAATGCCATTGGCTTTGGAAGTGTTTGGTTGCTTTTTGTGTGAGAGGAGGAGGGTGGAGGAGTGGGAGGATGCTGTTGAGAAGTTGAGAACAATTCAGCCTGGGAATCTTCATAATGTGTTGAAGATAAGTTATGATGGGTTGGATGAACAAGAGAAGTGTATATTCCTTGATATTGCTTGTTTATTTCTTCAAATGAGAATGAAGCGGTGTGATGTGATTGATATATTTAGAGGTTGTGGTTTTAAAGGAGAGATAGCTGTGACAAACCTTGTACAGAAATGCTTAGTCAAAATAGGACATGACAATACCTTGTTGATGCATGATCAAATTAGAGACATGGGAAGACAGATTGTTATGGATGAAAACCATGTTGATCCTGGGATGCGTAGTAGATTGTGGGATCGTGCTGGAATCATGTCCGTTTTCAAGAATACGAAGGGAACAAGATGCATACAAGGAGTTGTACTAGATTTTGAGAAAAGATTAATAATGCGTGAAGCAGAGAAATATAACGACGTTACACTTGATACAAAATCCTTTGAAACAATGGTTAACTTGAGATTGCTTCAGATCAATAATTTGAGTTTGGGAGGCATGTTTCTTCCAGATGAACTGAAATGGCTACAATGGCGAGGATGTCCTTTGGAATGTATTCCTTGGGACACTTTGCCACGTGAACTGGCTGTCCTTGATCTTTCAAATGCCGAGAAAATTAAAAGCTTGAGGGGATTGGAAAGTCACAAGCAGGTACCAGAGAACCTAATGGTCATTAACCTCTCCCACTGCTCCCAACTAGCGGAAATCCCTGATTTATCTAGGTGTCGCAAGCTAGAGAAAATTATTTTGGATAGCTGCATTAATCTAAAAAGGATTCATGAATCAATTGGTGGTTTGACTACCTTGCGTAATTTGAACTTGCGGCATTGTGAAAGCATCACTCAGCTTCCCAGTGATGTATGTGGGCTGAAACATCTGGAGATCCTAGTTCTTTCTAGTTGCACCAAGTTGAAAGCATTACCAAAAAGCATAGGCAAGCTTATATCGCTGAAAACACTTGAGGCTGATGGCACTGCTATAGTTAAGCTGCCTGAGTCCATTTTTCGATTGACCAAACTCGAACGACTTGTTTTAGACCGTTGCTCATATTTGAGAAGACTACCAAAGTGCATTGGAAAGTTATGTTCTTTGCAAGAATTATCTCTTAATCAATCAGGCTTACAAGAATTACCCGACACTGTAGGAACCTTGAAAAATCTTGAGAAGTTAAGTTTGATTGGGTGTGAATCTCTCACGGTAATGCCTGATTCTATAGGAAATCTCGTATCGTTGACAGAACTTTTGGCTTACAACAGTGGAATTAAAGAACTTCCTTCCACCATTAGTTCTTTATCGTATCTGAGGATGTTATCAGTTGGAAACTGTAAACATCTCAGTAAATTGCCTGACTCAATGAAAACTTTGGCTTCAATTACTGAACTTAAGTTAAACGGAACACCTATCAAATATCTTCCAGAGCAAATTGGAGACATGAAACAGCTAATGATACTTGATATTGGAAATTGCAGCAATCTTGAATCATTACCAGAATCCATTGGCCACCTAGGATCTCTTACTACATTGAACATAGACAATGGAAATATTAAAGAATTACCAACGTCGATTGGATTATTGGAAAATCTTGATACCTTAACATTGAACAAATGTAGAATGCTTAAAAAGCTCCCAGCTTCTATTGGAAACTTGAAATCTCTAAGTCACTTAATGATAGAGGAAACAGCTATGTCAGACTTGCCTGAAAGCTTCGGTATGCTCTCAAACTTGAGATCACTTAGAATGGCAAAGAGGCCTACTTTAGTTCCCATATCTGTGGAGAAAAATGGTTCTTTTGTGATACCGTCTTCTTTCTGTAATCTGACCTTGCTATATGAGTTCGATGCTCGTGCCTGGGGATTATCTGGGAAAATTCCTGATGAATTCGAGAAGCTATCATTAATAGAGACTTTAGATTTGGGCCAAAACAATTTCCACAGCCTTCCTTCCAGTTTGAAAGGTCTTTCCTCTCTTAAGAAACTCTCACTGCCAAATTGCACGGAGCTGACTTCTCTCCCCTCACTTCCTTCAAGCTTGATCGAGCTAAATGTTGACAATTGCTACGCATTAGAAAGTATACACAACATGTCAAATTTAGAGAGGTTGGAGGAGTTGAAACTCACAAACTGTGAGGAAGTGGTGGATATTCCAGGTCTTGAATGCTTGAAGTCCTTGAGAAGATTGTACCTGAGTGGTTGCAATGAATGTTCCTCCAAAGTACGCAAAAGACTTTCAAAGGTTGCACTGAGAAATTTTCAGAACTTGAGTATGCCAGGAACTAAGTTACCTGAATGGTTTTCGGGAGAAACTGTCGGCTTTTCCAAGCGCAAAAATCTTGAGCTAACAGGTGTAGTTGTAGGTGTCGTTTTCTCAATTAACCATAACAAAAAGAATATTCAAACACATGGAGTGTTTGACGTTCAAGCAAATGTTCTCAAATCTGGCAAACTTACTCTTAGTTCAGGGCTATACATAGCCGGAGTGCCAAGGACAGATGAACCACACATATACTTGGGAAGGTACCATGATTACCATGCATTGGTATCCGATTTAAAAGATGCTGATACAGTTAGTGTGACAAAGAGGAGTCCTCCTTTTGATGAGAGGTTTGAATTGATAAAATGTGGAATTCATTTAATCTTTGAAGGGGGTGATGATTATGAGGGAGACGAAGAATCGTTGGACAAAGGCTTACAATCTGTCTCAGAAAGGATGGCCAGGTTTTTTAACACTTATGAAGAAGTTGTTGATAACACTTATGATGAAGTTGTTGATGCAACTGAGAGTGAAGATGAGTGTCAACATGAATAG 4062 0.3951 MSSSSSSFSGGGAFRFRWDVFLSFRGEDTRECFTKKLYESLHSPGVRVFMDDEGLDRGDRIDITLLQAIDDSAASIVIISPKYAESHWCLDELVRIFECKRLVIPVFYQVDPSHVRKQSGPFQKGFTDLQNRFDNDMVSKWRDSMKQLGGLAGFVFNDSYEGERENLIHLLVKRVLKELSNTPMVVAEFLVGLNERVDKVMNLLQLQSNTVKVLGLYGMGGVGKTTLAKALFNSLVGRFERRCFVSNVRHSSSKEGGLLSLQSNIIKDLSSKDGTQSSIGDVNAGIATIKRIVHENRVLLVLDDVDNVNQLDALIGQKEWFYEGSCIIITTRDTSALPEKHVNKLYEVKELYDEEALQLFSYHAFRKKDPPPSFLEFSKKIVSRTGRMPLALEVFGCFLCERRRVEEWEDAVEKLRTIQPGNLHNVLKISYDGLDEQEKCIFLDIACLFLQMRMKRCDVIDIFRGCGFKGEIAVTNLVQKCLVKIGHDNTLLMHDQIRDMGRQIVMDENHVDPGMRSRLWDRAGIMSVFKNTKGTRCIQGVVLDFEKRLIMREAEKYNDVTLDTKSFETMVNLRLLQINNLSLGGMFLPDELKWLQWRGCPLECIPWDTLPRELAVLDLSNAEKIKSLRGLESHKQVPENLMVINLSHCSQLAEIPDLSRCRKLEKIILDSCINLKRIHESIGGLTTLRNLNLRHCESITQLPSDVCGLKHLEILVLSSCTKLKALPKSIGKLISLKTLEADGTAIVKLPESIFRLTKLERLVLDRCSYLRRLPKCIGKLCSLQELSLNQSGLQELPDTVGTLKNLEKLSLIGCESLTVMPDSIGNLVSLTELLAYNSGIKELPSTISSLSYLRMLSVGNCKHLSKLPDSMKTLASITELKLNGTPIKYLPEQIGDMKQLMILDIGNCSNLESLPESIGHLGSLTTLNIDNGNIKELPTSIGLLENLDTLTLNKCRMLKKLPASIGNLKSLSHLMIEETAMSDLPESFGMLSNLRSLRMAKRPTLVPISVEKNGSFVIPSSFCNLTLLYEFDARAWGLSGKIPDEFEKLSLIETLDLGQNNFHSLPSSLKGLSSLKKLSLPNCTELTSLPSLPSSLIELNVDNCYALESIHNMSNLERLEELKLTNCEEVVDIPGLECLKSLRRLYLSGCNECSSKVRKRLSKVALRNFQNLSMPGTKLPEWFSGETVGFSKRKNLELTGVVVGVVFSINHNKKNIQTHGVFDVQANVLKSGKLTLSSGLYIAGVPRTDEPHIYLGRYHDYHALVSDLKDADTVSVTKRSPPFDERFELIKCGIHLIFEGGDDYEGDEESLDKGLQSVSERMARFFNTYEEVVDNTYDEVVDATESEDECQHE 1353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00744 1353 Gene3D - 350 435 IPR042197 -
Vivi7g00744 1353 SMART till_3 17 151 IPR000157 GO:0007165
Vivi7g00744 1353 Gene3D Ribonuclease Inhibitor 542 719 IPR032675 -
Vivi7g00744 1353 Pfam NB-ARC domain 195 423 IPR002182 GO:0043531
Vivi7g00744 1353 Gene3D Ribonuclease Inhibitor 1000 1201 IPR032675 -
Vivi7g00744 1353 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 776 IPR044974 GO:0006952
Vivi7g00744 1353 FunFam Disease resistance protein (TIR-NBS-LRR class) 15 181 - -
Vivi7g00744 1353 Gene3D - 176 344 IPR027417 -
Vivi7g00744 1353 SMART LRR_typ_2 1049 1071 IPR003591 -
Vivi7g00744 1353 SMART LRR_typ_2 685 709 IPR003591 -
Vivi7g00744 1353 SMART LRR_typ_2 921 944 IPR003591 -
Vivi7g00744 1353 SMART LRR_typ_2 874 897 IPR003591 -
Vivi7g00744 1353 SMART LRR_typ_2 780 803 IPR003591 -
Vivi7g00744 1353 SMART LRR_typ_2 827 850 IPR003591 -
Vivi7g00744 1353 SMART LRR_typ_2 733 756 IPR003591 -
Vivi7g00744 1353 Pfam TIR domain 18 182 IPR000157 GO:0007165
Vivi7g00744 1353 ProSiteProfiles TIR domain profile. 16 176 IPR000157 GO:0007165
Vivi7g00744 1353 SUPERFAMILY L domain-like 493 908 - -
Vivi7g00744 1353 SUPERFAMILY L domain-like 897 1178 - -
Vivi7g00744 1353 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 153 IPR035897 -
Vivi7g00744 1353 Gene3D - 15 175 IPR035897 -
Vivi7g00744 1353 Gene3D Ribonuclease Inhibitor 720 999 IPR032675 -
Vivi7g00744 1353 PRINTS Disease resistance protein signature 895 911 - -
Vivi7g00744 1353 PRINTS Disease resistance protein signature 292 306 - -
Vivi7g00744 1353 PRINTS Disease resistance protein signature 213 228 - -
Vivi7g00744 1353 PRINTS Disease resistance protein signature 385 399 - -
Vivi7g00744 1353 SMART LRR_CC_2 803 830 IPR006553 -
Vivi7g00744 1353 SMART LRR_CC_2 850 877 IPR006553 -
Vivi7g00744 1353 SMART LRR_CC_2 685 712 IPR006553 -
Vivi7g00744 1353 SMART LRR_CC_2 897 924 IPR006553 -
Vivi7g00744 1353 SMART LRR_CC_2 1072 1102 IPR006553 -
Vivi7g00744 1353 SMART LRR_CC_2 1139 1172 IPR006553 -
Vivi7g00744 1353 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 445 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00744 Vivi-Chr7 43506900 43513415 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00744 18 856 WRKY Transcription Factor Family AT4G12020 29.651 2.54e-78 284