Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00742 ATGTCTTCCCCTCCTTCTTCTTCCTCCGGTGGAGGAGAAGCATTCAGGCTTCGTTGGGACGTGTTTTTGAGTTTCAGAGGTGAAGATACTCGCGAATGCTTCACCAAAAAACTATACCAATCTCTCCACACTGAAGGTGTTCGTGTTTTCATGGACGATGAGGGTTTGGACCGTGGAGATCACATAGATACCACTTTTCTTCAAGCCATTGATGACTCTGCTGCTTCCATTGTTATTATCTCTTCTAATTACGCTGACTCTCATTGGCGTCTTGATGAACTTGTCAGGATTTTTCAATGGAAGAATAGGCTTGTTATTCCCGTTTTCTACCAGGTTGATCCTTCTCATGTTCGGAAACAGTCCGGTCCTTTTCAAAAAGGTTTTACTGATCTTCAAAACAGATTTGATAATCAAAAGGTTTCCAAGTGGAGAGATTCTATGAAACAACTTGGTGGACTCGCTGGCTTTGTTTTCAATAACAGTTATGAAGGCGGGCACGAAAATCTGATACACCTTTTGGTGAAAAGGGTTTTGAAGGAGTTAAGTAATACTCCAATGGTTGTCGCTGACTTTCTAGTCGGACTCGATACTCGTGTTGAGAAGGTGATGGATCTGTTACAACTTCAATCCAACACTGTCAAGGTCTTAGGGTTGTATGGAATGGGAGGTGTTGGTAAGACAACCCTTGCCAAGGCTCTTTTCAATAGTCTCGTGGGTCGTTTTGAACGTAGATGTTTCGTTTCAAATGTGAGACACTCCTCATCTAAAGAGGGTGGTTTGCTTTCTCTTCAAAGCAATATTATTAAAGATCTTTCTTCTCAACAAAGATCTCAGAGTTTTATCGGTGATGTCAATGCTGGTCTTTCTACTATCAAACAAATAGTTCTTGAAAATCGAGTTCTACTAGTGTTGGATGATGTTGATAATGTAAACCAGCTTGATGCTTTGATTGGTAAAAGGGAATGGTTTTATAAAGGAAGCTGTATAATCATTACAACAAGGGACACAACTGCTTTGCCTGAAAATTATGTCAATAAGTTGTATGAAGTCAAAGAATTGTTTGATGAAGAAGCTCTACAATTATTCAGTTACCATGCTTTGAAGAAAAAGGACCCTCCAGAAAATTTTCTGGATTTTTCAAAGAAAATTGTATCTCTTACAGGAAGAATGCCATTGGCTTTGGAAGTGTTTGGTTGCTTTCTGTATGAGAGGAGGAGGGTGGAGGAGTGGGAGGATGCTATTAAGAAGCTGAGAACAATTCGGCCCGGGAATCTTCACGATGTGTTGAAGATAAGTTATGATGGGTTGGATGAACAAGAGAAGTGTATATTCCTTGATATTGCTTGTTTCTTTATTCAAATGGAAATGAAGCATGGTGATGTGATTGATATACTAAGAGGTTGTGGTTTTAGAGGAGAGATAGCTATGACGATCCTTGTACAGAAATGCTTAATCAAAATAAAACATGACAATACCTTGTGGATGCATGATCAAATTAGAGATATGGGAAGACAGATTGTAATGGATGAAAACCATGTTGATCCTGGGATGCGTAGTAGATTGTGGGATCGTGCTGAAATCATGTCCGTTTTGAAGAGTAAGAAGGGAACAAGATGCATACAAGGAGTTGTACTAGACTTTAAGAAAAGATCAATAATTGTAGGAGAGAAATATAACGAAGTTATACTTGATACAAAATCCTTTGAACCAATGGTTACCTTAAGATTGCTTCAGATCAATAATCTGAGTTTGGAAGGCAAGTTTCTTCCAGATGACCTGAAATGGCTACAATGGCAAGGATGTCCTTTGGAATACATTCCTTTGGACACATTGCCACGTGAACTGGCTGTCCTTGATCTCTCAAATGCCCAGAAAATTAAAAGCTTGAGTGCATTGGAAAGTCACAACAAGGTACCAGAGAACCTAATGGTCATTAAACTCTCCGACTGCTACGGACTTGCTGCAATCCCTGATTTATCTAGGTGTCTCAAGCTGGAGAAAATTAGTTTGGATAGCTGCATTAACCTCAAAAGGATTCATGAATCAATTGGCAGTTTGACTACCTTGCGTAGTTTGAACTTGAGGCGTTGTGAAAACATTACTGAGATTCCCAGTGATGTTTCTGGGCTGAAACATCTGGAGACCCTCATTCTTTCTAGTTGCACTAAGTTGAAAGCATTACCCGAAAGCCTAGGCATGCTTAAATCTCTGAAAACACTTGAGGCTGTTCACACTGATATAGTAAAGTTGCCCGAGTCCATTTTTAGATTGACCACACTCGAACGACTTGTTTTAGACAGTTGCTACAAATTTAGAAGACTACCAAACTGCATTGGAAAATTATGTTCTTTGCAAGAATTATCTCTTAATCATTCAGGCTTACAAGAATTACCGGACACTGTGGGATCCTTGAAAAATCTTGAGAAGTTAAGTTTGATTGGGTGTCAATCTCTCACTCAATTGCCAGATTCTGTTGGAAACCTCATATCGTTGACAGAGCTTTTGGCTTACAACACCGGAATTAAGGAACTCCCTTCCACCATTGGTTCTTTATCCTATCTGAGGAATTTATCAGTTGGAAACTGTAAGCATCTCAATAAATTGCCCGACTCAATTAAAACTTTGGCTTCAATTATTGAACTTCAGTTAGATGGAACACCTATTAGATATCTTCCAAATCAAATTGGAGACATGAAACAACTAAGGAAACTTGAGATTGGAAATTGCATCAATCTTGAATCATTACCAGAATCCATTGGCCACCTAGGATCTCTTACTACATTGAACATAGACAATGGAAATATCAAAGAATTACCAATGTCGATTGGATTATTGGAAAATCTTGTTACCTTAACATTGAAGAAATGTAGAATGCTTAACCAGCTCCCAGCTTCTATAGGGAACTTGAAATCTCTATGTCACCTAAACATGAAGGAAACAACTATATCAGACTTGCCTGAAAGTTTTGGTATGCTCTCAAGCTTGAGAACACTGAGAATGGGAAAGGAGCCTAATTTAGTTCCCACATCTATGGAGAACACGAGCTCTTTTGTGATGCCGTCTTCTTTCTGTAATCTGACCTTGCTATCTGATTTCGATGCCCATGCATGGGGATTATTTGGTAAAATTCCTGATGAATTCGAGAAGCTATCATTAATAGAGACTTTAAAATTGGGCCGCAACAATTTCCACAGCCTTCCTTCCAGTTTGAAAGGTCTTTCCTTTCTCAAGAAACTCGAACTGCTAAATTGCACGGAGCTGACTTCTCTCCCACCACTTCCTTCAAGTTTGATCGAGCTAAAAGCTGATAATTGCTACGCATTAGAGACAATACATGACATGTCAAATTTAGAGAGTTTGGAGGAGTTGAAACTCACAAATTGTGGGAAAGTGGTGGATATTCCAGGTCTTGAATGCTTGAAGTCCTTGAAAAGATTGTTCCTTAGTGGTTGCAGTGCATGCTCCTCCCAAGTACGCAAAAGACTTTCAAAGGTGGCACTGAGAAATTTTCAGAACTTGAGCATGCCGGGAACCAAATTACCTGAATGGTTTTCAGGAGAAACTGTAAGCTTTAAGAATCGCAAAAATCTCGAGCTAAAAAGTGTAGTTGTAGGTGTTATTTTCTCAATTAACCATGACAAGATGAAAAGTCAAATCCCTGACGTGGTTGATATTCAAGCAAAGGTTCTCAAATTAGGCGAACAAGTTTTTAGTTCAGTGCTATACATAGGTGGGGTGCCAAGGACAAATGAACCACAAATACACTTGCGAAGGTTCCATGATTACCATGCATTGCGAAGGGAATTAAAAGAAGCTGATACGGTTTGTGTGACAAAGAGAAGTCCTCCTTTTGATGAGAGGTTGGAATTGATAAAAGCTGGAATTCATTTAATCTTTGAAGGGGATGATGATTATGAGGGAGACGAAGAATCGTTGGACAAAGGCCTACAATCTGTCTCAGAAAGGATGGCCAGGTTTTTCAACACTTATGATGAAGGTGTTGATGCAACTGAGAGTGAAGATAAGTGTCAACATGAATTGGAGCAGGCAAAAGAAAAGCCTCAAACTAGATTACTTGGTGTCAAAGGCAATTCCATTCTATTCTTCCTGTTTAATCTATTCCTTGTGCTGTTGGGTTGGTTTTGGTTGAGGTTTATGTCAAGTGCTGAAAGGAGGGATTGA 4182 0.3934 MSSPPSSSSGGGEAFRLRWDVFLSFRGEDTRECFTKKLYQSLHTEGVRVFMDDEGLDRGDHIDTTFLQAIDDSAASIVIISSNYADSHWRLDELVRIFQWKNRLVIPVFYQVDPSHVRKQSGPFQKGFTDLQNRFDNQKVSKWRDSMKQLGGLAGFVFNNSYEGGHENLIHLLVKRVLKELSNTPMVVADFLVGLDTRVEKVMDLLQLQSNTVKVLGLYGMGGVGKTTLAKALFNSLVGRFERRCFVSNVRHSSSKEGGLLSLQSNIIKDLSSQQRSQSFIGDVNAGLSTIKQIVLENRVLLVLDDVDNVNQLDALIGKREWFYKGSCIIITTRDTTALPENYVNKLYEVKELFDEEALQLFSYHALKKKDPPENFLDFSKKIVSLTGRMPLALEVFGCFLYERRRVEEWEDAIKKLRTIRPGNLHDVLKISYDGLDEQEKCIFLDIACFFIQMEMKHGDVIDILRGCGFRGEIAMTILVQKCLIKIKHDNTLWMHDQIRDMGRQIVMDENHVDPGMRSRLWDRAEIMSVLKSKKGTRCIQGVVLDFKKRSIIVGEKYNEVILDTKSFEPMVTLRLLQINNLSLEGKFLPDDLKWLQWQGCPLEYIPLDTLPRELAVLDLSNAQKIKSLSALESHNKVPENLMVIKLSDCYGLAAIPDLSRCLKLEKISLDSCINLKRIHESIGSLTTLRSLNLRRCENITEIPSDVSGLKHLETLILSSCTKLKALPESLGMLKSLKTLEAVHTDIVKLPESIFRLTTLERLVLDSCYKFRRLPNCIGKLCSLQELSLNHSGLQELPDTVGSLKNLEKLSLIGCQSLTQLPDSVGNLISLTELLAYNTGIKELPSTIGSLSYLRNLSVGNCKHLNKLPDSIKTLASIIELQLDGTPIRYLPNQIGDMKQLRKLEIGNCINLESLPESIGHLGSLTTLNIDNGNIKELPMSIGLLENLVTLTLKKCRMLNQLPASIGNLKSLCHLNMKETTISDLPESFGMLSSLRTLRMGKEPNLVPTSMENTSSFVMPSSFCNLTLLSDFDAHAWGLFGKIPDEFEKLSLIETLKLGRNNFHSLPSSLKGLSFLKKLELLNCTELTSLPPLPSSLIELKADNCYALETIHDMSNLESLEELKLTNCGKVVDIPGLECLKSLKRLFLSGCSACSSQVRKRLSKVALRNFQNLSMPGTKLPEWFSGETVSFKNRKNLELKSVVVGVIFSINHDKMKSQIPDVVDIQAKVLKLGEQVFSSVLYIGGVPRTNEPQIHLRRFHDYHALRRELKEADTVCVTKRSPPFDERLELIKAGIHLIFEGDDDYEGDEESLDKGLQSVSERMARFFNTYDEGVDATESEDKCQHELEQAKEKPQTRLLGVKGNSILFFLFNLFLVLLGWFWLRFMSSAERRD 1393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00742 1393 SMART LRR_typ_2 875 898 IPR003591 -
Vivi7g00742 1393 SMART LRR_typ_2 1050 1072 IPR003591 -
Vivi7g00742 1393 SMART LRR_typ_2 734 757 IPR003591 -
Vivi7g00742 1393 SMART LRR_typ_2 828 851 IPR003591 -
Vivi7g00742 1393 SMART LRR_typ_2 922 947 IPR003591 -
Vivi7g00742 1393 SMART LRR_typ_2 969 991 IPR003591 -
Vivi7g00742 1393 SMART LRR_typ_2 781 804 IPR003591 -
Vivi7g00742 1393 SMART LRR_typ_2 686 710 IPR003591 -
Vivi7g00742 1393 SMART till_3 18 153 IPR000157 GO:0007165
Vivi7g00742 1393 SUPERFAMILY L domain-like 494 916 - -
Vivi7g00742 1393 Gene3D - 181 345 IPR027417 -
Vivi7g00742 1393 Gene3D - 17 180 IPR035897 -
Vivi7g00742 1393 SUPERFAMILY L domain-like 874 1182 - -
Vivi7g00742 1393 SMART LRR_CC_2 804 837 IPR006553 -
Vivi7g00742 1393 SMART LRR_CC_2 898 925 IPR006553 -
Vivi7g00742 1393 SMART LRR_CC_2 1140 1173 IPR006553 -
Vivi7g00742 1393 SMART LRR_CC_2 851 878 IPR006553 -
Vivi7g00742 1393 SMART LRR_CC_2 686 716 IPR006553 -
Vivi7g00742 1393 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 155 IPR035897 -
Vivi7g00742 1393 Gene3D Ribonuclease Inhibitor 556 724 IPR032675 -
Vivi7g00742 1393 PRINTS Disease resistance protein signature 387 401 - -
Vivi7g00742 1393 PRINTS Disease resistance protein signature 708 724 - -
Vivi7g00742 1393 PRINTS Disease resistance protein signature 294 308 - -
Vivi7g00742 1393 PRINTS Disease resistance protein signature 215 230 - -
Vivi7g00742 1393 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 447 IPR027417 -
Vivi7g00742 1393 Gene3D - 353 443 IPR042197 -
Vivi7g00742 1393 Pfam NB-ARC domain 197 423 IPR002182 GO:0043531
Vivi7g00742 1393 Pfam TIR domain 19 180 IPR000157 GO:0007165
Vivi7g00742 1393 Gene3D Ribonuclease Inhibitor 725 1008 IPR032675 -
Vivi7g00742 1393 Gene3D Ribonuclease Inhibitor 1009 1217 IPR032675 -
Vivi7g00742 1393 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 775 IPR044974 GO:0006952
Vivi7g00742 1393 ProSiteProfiles TIR domain profile. 17 181 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00742 Vivi-Chr7 43360986 43366424 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00742 19 857 WRKY Transcription Factor Family AT4G12020 29.391 1.32e-77 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00742 - - mtr:11408681 2043.08