Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00728 ATGAAAGATTGGTTTTCTCTATACCAAACTGTCTTTTACCTGCAAGAGCAGAAAGATTCATGGAGGACTGTTCTGACACTGGCATATCAGAGTCTTGGAGTTGTTTATGGAGATTTAAGCATTTCACCTTTATATGGAATGGGAATTCCTGTTGGAAAGCTTTCTCTATATACTGCATTAGGAGGTGTTCGCCCTTCATCGTGCTTGCCTATAACGATTGATGTTGGCACAAATAATGAGAAGTTGTTGAATGGTGAGTTTTACATTGGCCTTAGACAGGAGCGAGCAACTGCGAAGGAATATGCGGAGCTTCTAGACGAGTTTATGGATGCAATTAAGCAGAAGAATGGAGAGAAAATTCTTTTTGAAGAGTTAGCCAATCATAATGCGTTCGATCTTCTTGATAAATATAGCTCGTCGCATCTTATTTTCAATGATGATATACATGGTACAGCTTCTGTGGTTGGGACTGGTATAGAAGAGTTGATAGCTCTTGAGATTTCAAAGCAAGTATAA 516 0.3895 MKDWFSLYQTVFYLQEQKDSWRTVLTLAYQSLGVVYGDLSISPLYGMGIPVGKLSLYTALGGVRPSSCLPITIDVGTNNEKLLNGEFYIGLRQERATAKEYAELLDEFMDAIKQKNGEKILFEELANHNAFDLLDKYSSSHLIFNDDIHGTASVVGTGIEELIALEISKQV 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00728 171 Gene3D - 7 170 IPR037062 GO:0004471
Vivi7g00728 171 PRINTS Malic enzyme signature 119 137 IPR001891 GO:0004470|GO:0004471
Vivi7g00728 171 PRINTS Malic enzyme signature 25 54 IPR001891 GO:0004470|GO:0004471
Vivi7g00728 171 PRINTS Malic enzyme signature 61 83 IPR001891 GO:0004470|GO:0004471
Vivi7g00728 171 PRINTS Malic enzyme signature 144 160 IPR001891 GO:0004470|GO:0004471
Vivi7g00728 171 Pfam Malic enzyme, N-terminal domain 37 137 IPR012301 GO:0004471
Vivi7g00728 171 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 37 147 IPR046346 -
Vivi7g00728 171 PANTHER MALIC ENZYME-RELATED 37 160 - -
Vivi7g00728 171 SMART malic_2 5 138 IPR012301 GO:0004471
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00728 Vivi-Chr7 43189858 43191785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00728 13 45 Inorganic Solute Cotransporters AT1G70300 84.848 5.75e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00728 K00029 - vvo:131618946 342.043