Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00715 ATGGCAAATGATACTTCAAGTTGTGATTTTCATAATAAACGTCTTGGTCTTTTAAAAGATCAAGTTCATTTGGTGAAAAGGAAGGATTCTAATCGCTATGAGATTGCTGCGATACAAGATCAACTATCATTTGAGAAGGGGTTTTTTATAGTCATTCGTGCGTGCCAATTGTTAGCACAAAAGAATGATGGAATAATATTGGTTGGGGTGGCGGGTCCTTCGGGAGCGGGGAAGACTATATTTACTGAAAAGATACTCAATTTCATGCCTAGTGTTGCTGTTATTTCAATGGATAATTACAATGATGCTAGTCGAATTGTTGATGGAAACTTCGATGATCCACGCTTAACTGACTATGACACATTGCTCCAGAATTTACAAGATTTGAAGGAAGGAAAGACTGTCCAGGTTCCGATATACGATTTCAAGTCCAGTTCACGCGTAGGATACAGGACTGTAGAACCCCCGACTTCCAATATTGTGATTATAGAAGGTATCTATGCCTTGAGTGAGAAGTTGCGAACTTTGCTGGACCTTCGAGTTTCTGTTACAGGTGGAGTTCACCTTGACCTTGTAAAGCGAGTTATACGTGACATTCAACGTGCTGGCCAAGAGCCTGAAGAAATCATTCATCAAATATCTGAGACGGTATATCCTATGTATAAGGCTTTCATTGAGCCAGATCTCAAGACCGCGCATATAAAAATCACCAACAAATTTAATCCATTTACTGGATTCCAGAGCCCGACTTACATATTAAAGTCAGCAAAGACTGTAGCAGTTGACCAAATTAAAGCTGTTCTCTCTGAAGATTGTCTGGAAACAACTGAGCAAACTTATGATATATATCTTCTACCTCCTGGTGAAGATCCAGAAACATGCCAATCGTATTTAAGGATGCGAAACAAGGATGGGAAATACAGTCTTATGTTTGAGGAATGGGTGACAGACAATCCCTTTGTCATATCGCCGAGAATTACTTTTGAGGTCAGTGTGCGCCTCCTTGGTGGACTAATGGCCTTGGGATACACGATAGCTACTATCCTTAAGAGAAACAGCCATGTCTTTTCTGATGATAAGGTTTGTGTGAAACTAGATTGGCTTGAGCAACTTAATCGACATTATGTTCAGGTACAAGGGAGAGATCGCTTAGTTTTGAAAGAGATTGGAGATCAGCTGGGTCTCGAAGGTTCCTACATTCCTCGTACTTACATTGAGCAAATTCAACTTGAAAGGCTTGTGAATGAGGTTATGGCTCTACCAGAAGATTTGAAGACAAAGCTCAGCCTGGATGAGGATTTGGTTTCAAGCCCCAAAGAAGCACTTTCTAGAGCTTCTGCTGACAGGGTTGCCATGAGAAATGAGAATATGAGAAGTGGATTGTCACAGTCATATACAAGTCAAAGGGACAAAAATGCAGCCAAAGTTAATGGATATTTTACCAACAATCGAGGATTTGGTGAAAGAAATTCAGATTCCTCCACAACACAATTAAATCAGCTTTCAGAACAGATTTCCGCCCTCAATGATAGAATGGATGAATTTACAAATCGGATTGAAGAGCTGAATAGCAAGCTGACCATTAGAAATAAGTCTCCAAGCCAACCAAATATGTTAGCTCAAGCCGAAGTCTGCAATGGTTCTGCTCCCACGTCTTACTTCATCAACAGTTTGGGCAATGGTAGCATAACTGGTTATAAGATGCCACATTCCTCGTCTACATCCCAATTAAATAAGGAGTCTCCCTTAATAGATGAGATATCGGGCATCACACGTGGGCAGCGTCAGATCATGCATCAAATGGACAATCTAAATAATCTTCTTCGGGGTGGTATAGGGGAAAGGTCTCAGCAAACAAGAATCAACAACAAGAGCATAGTTACAGATTTGAATTACGTTGGAGCGAGTATTGTAGTGGTAGTTGCAGTTGGTTGTTTGGGGATCTTTTTGACCCGAAAGTGA 1962 0.4067 MANDTSSCDFHNKRLGLLKDQVHLVKRKDSNRYEIAAIQDQLSFEKGFFIVIRACQLLAQKNDGIILVGVAGPSGAGKTIFTEKILNFMPSVAVISMDNYNDASRIVDGNFDDPRLTDYDTLLQNLQDLKEGKTVQVPIYDFKSSSRVGYRTVEPPTSNIVIIEGIYALSEKLRTLLDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLKTAHIKITNKFNPFTGFQSPTYILKSAKTVAVDQIKAVLSEDCLETTEQTYDIYLLPPGEDPETCQSYLRMRNKDGKYSLMFEEWVTDNPFVISPRITFEVSVRLLGGLMALGYTIATILKRNSHVFSDDKVCVKLDWLEQLNRHYVQVQGRDRLVLKEIGDQLGLEGSYIPRTYIEQIQLERLVNEVMALPEDLKTKLSLDEDLVSSPKEALSRASADRVAMRNENMRSGLSQSYTSQRDKNAAKVNGYFTNNRGFGERNSDSSTTQLNQLSEQISALNDRMDEFTNRIEELNSKLTIRNKSPSQPNMLAQAEVCNGSAPTSYFINSLGNGSITGYKMPHSSSTSQLNKESPLIDEISGITRGQRQIMHQMDNLNNLLRGGIGERSQQTRINNKSIVTDLNYVGASIVVVVAVGCLGIFLTRK 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00715 653 Pfam CYTH domain 252 404 IPR023577 -
Vivi7g00715 653 ProSiteProfiles CYTH domain profile. 248 410 IPR023577 -
Vivi7g00715 653 Gene3D - 254 412 - -
Vivi7g00715 653 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
Vivi7g00715 653 Coils Coil 491 525 - -
Vivi7g00715 653 SUPERFAMILY CYTH-like phosphatases 263 407 IPR033469 -
Vivi7g00715 653 CDD UMPK_like 67 239 - -
Vivi7g00715 653 PRINTS Uridine kinase signature 224 237 - -
Vivi7g00715 653 PRINTS Uridine kinase signature 132 147 - -
Vivi7g00715 653 PRINTS Uridine kinase signature 65 82 - -
Vivi7g00715 653 PRINTS Uridine kinase signature 188 198 - -
Vivi7g00715 653 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 238 IPR027417 -
Vivi7g00715 653 Gene3D - 66 248 IPR027417 -
Vivi7g00715 653 PANTHER URIDINE KINASE 38 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00715 Vivi-Chr7 43087159 43093859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00715 66 236 PRT Gene Family AT4G26510 29.444 7.38e-19 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00715 K00876 - gmx:100797542 1077.77