Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00702 ATGGATTTCGTGAAGAAGTGTAGGATAGTATTGAGAAGCAACAAGAGCATGAAGAAGCAAAAAGATAATCCTAAAAAACCACCACATGGTGGTGTTTGTGTCTATGTTGGAGCTGAGAGACAAAGATTCATAATAAAGATCAAAATATTGAATCATCCTTTGTTCAAGTCACTTCTAGAAGATGTTGAGAATGAATATGGATATGGAAACAATGGTCCTCTATGGCTTCCTTACGAAGTTAACATTTTCTGTGAAGCACTTATGGAGATAAAAAGTGCTATGAGTGACATGGGTTGCAATTTTCACACAGTAGCTACTACTCATTACTTGGAAATACCAATGTACCAAGAAAACCAATGCCAAAGAAACACTGCAAAAGCTGATTATATGAGTTTGTTTTCAAGTGAAAAAGAAAATCTAAAGAGTGTGTTAGCATTCATTCTTGGAAGAGTTTGTCTAACTTCAGATGTATGGATAACTGTAACAACACAAGGTTATATGACTGTCACCGCTCATTATGTTGATAAAGATTGGAAATTAAATAGCAAATTACTTTCATTTTGTCACTTGGAGAATGCACATACATGTTTGGAATTATCAAGAAAATTACTTAGTGCTTTGAAGCATTGGGGAATAGATGGTAAAACATTTTCACTCACATCGGATAATGCCTCTTTGACTGATAGCATGCTAAACATTTTGAAAGAGAGACTCAATTTGCAAGATGCTTTGCTATGTAAAGAAGGTGGATTCTTAAGTTTGGATATGTGTACTAGATGGAATGTTACATATATAATGCTTGAAAGTGCTATTAGGTATCGACGTGCATTCATTAGCTTGAGTTATGATGATAAAAACTACAAGATTTGTCCAAGCATTGAAGAATGGGATAGAGCAATGAAAATTTGTAATTTATTGGCTCCATTTTATGATATTACCAACTTAATTATTGGATCGTCTTACATAACCTCATACTTATACTTCATGCAAGTTGCACTTATAAAGATGGAAGTGAATAGAAATTTGAAAACTCAAGATGATGTGATCAAAGATATGGTTACTCTTGCACTTGGAAATATTCTTGATCCACCATCAAAGTTGGACTTTTTGAACTTTTGCTTTAAGAAACTTGATCCAAGTGGCTATGAAGATAGGGTAAAGAAAATGAAGGATGGCTTGTATGATCTCTCTGATGCATATCAAAATAATATTGTTACATCAATTTCATCAAGAAATAATAAATCTCACTCTTTTGGACAACCATTAGGCACTACATCATTTTTTAAGGAATATCGTCAAAAAAAGATACAAAAGATTTTAACTGATGGCAAATCCAAACTTGCAATATACTTGGATGAAAATTGTTTGAATAGTGATGTAGATATTCTTCAATATTGGAAATTAAATAGTGTCTGA 1416 0.3277 MDFVKKCRIVLRSNKSMKKQKDNPKKPPHGGVCVYVGAERQRFIIKIKILNHPLFKSLLEDVENEYGYGNNGPLWLPYEVNIFCEALMEIKSAMSDMGCNFHTVATTHYLEIPMYQENQCQRNTAKADYMSLFSSEKENLKSVLAFILGRVCLTSDVWITVTTQGYMTVTAHYVDKDWKLNSKLLSFCHLENAHTCLELSRKLLSALKHWGIDGKTFSLTSDNASLTDSMLNILKERLNLQDALLCKEGGFLSLDMCTRWNVTYIMLESAIRYRRAFISLSYDDKNYKICPSIEEWDRAMKICNLLAPFYDITNLIIGSSYITSYLYFMQVALIKMEVNRNLKTQDDVIKDMVTLALGNILDPPSKLDFLNFCFKKLDPSGYEDRVKKMKDGLYDLSDAYQNNIVTSISSRNNKSHSFGQPLGTTSFFKEYRQKKIQKILTDGKSKLAIYLDENCLNSDVDILQYWKLNSV 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00702 471 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 121 241 - -
Vivi7g00702 471 SUPERFAMILY Ribonuclease H-like 137 469 IPR012337 -
Vivi7g00702 471 Pfam Auxin responsive protein 16 87 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00702 Vivi-Chr7 42387310 42390011 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00702 28 83 Calmodulin-binding Proteins AT4G34750 46.429 1.01e-12 63.9