Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00680 ATGAAGAATCTATTATTTTGTCTCTTTCTTTTTTCATTCTCATTTTTTTGTTTCTTTGCTTGCTCAATTGCAAGTATAAAAAATATCAGCACAGACGAGTCTGCTCTTCTAGCAATTAAATCCCTCATTACTTCAGACCCCTATAATATGTTATCTAATAATTGGTCAAGTTCATATTCTGTATGCAATTGGGTTGGTATCAGTTGTGATAAGAAACACAATAGAGTTCACAGTTTGAATCTCACAAGCATGGATCTTAGAGGCACTCTTTCCCCAAATATAGGAAACTTGTCGTTCCTTGTTATACTTGATCTCTCCAACAACAGTTTTGGTGGCCAGCTTCCCAAAGAGATCTGTTGGTTGCGCCGATTAAAGGCTCTTGAAGTCAACCATAACGAATTTGTTGGAGGAATTCCTATAGCGTTGGGAGAATTATCACAACTTGTATATTTAGATCTCTCGTTTAACAACTTGAATGGTTTTATCCCTCAATCTATACACAACTTGTCTAAGTTAGTGTACTTAGATTTTGAAAAAAACTCCATCGAAGGTACCATTCCATCAGCGGTTGGACGACTTCATCGACTGAAAAGTTTGAATATTGGTGAAAACGAGATGTCGGGTTTATTACCCAAAGAAATCTCAAACTTATCTTCACTTGCTGGATTGTTTTTATCTTCCAACAGTTTTTCAGGTCCAATACCCGAGGAGATTGGTTATCTTGATCAACTTGAGTATCTAATATTGGCAAACAATAGCTTTAATGGATCTCTTCCTTCCAAGCTCCTCAACATATCATCACTGGAAGGTTTGTATCTTGAAAAAAATTACTTCTCAGGTAAAATCCAATCGAATACAAGATATAGCCTTCCTAAGCTGCTATCTCTACACTTGAATCAAAACAATTTTGTTGGAAATATTCCAAATTGTATATTCAATGCTTCTAACCTCATTCAATTACAATTGAGTTTCAATGCATTCAGTGGAACTCTACCCAATACTGCATTTGGAGATTTAAGGTTCCTAGAAGTGTTTCTCATATATTACAATGATTTAACAATTAATGATTCTTTCCAATTCTTTACTTCGTTGACGAATTGTAGAAACTTGAAATATATAGGCCTGTCGGGAAATTATATACAATCCAGCCTTCCGAAGTCAATTGGAAACTTAACTTCAGAATCCTTTGAGGTAGATTCATGTGGAATTAATGGTAATATTCCCATAGAAATTGGAAACATGAGCAATTTGCTATTTTTTTCTCTAATTGGGAATAATATAATTGGACCAATACCTTCTACATTTAAAGGGTTACAAAAACTTCAGAGCTTGTATCTTAGTGACAATAGAATAAAAGGATCATTTATTGAAGAGCTTTGTGAAATTAAGAGTTTGGGTGAGTTGTATTTAGGAAATAATAAGCTTTCAGGAGTATTACCAGCATGTTTGGGAAATATGACCTCTCTTATAAAGATACATGTAGGATATAACAATTTAAACTCAAAAATACCTACCTCACTTTGGAGTCTTAGAGATATTTTAGAGGTGAATTTGTCCTCTAATACTTTCATTGGTAATCTTCCACCAAAGATTGGGAATTTGAGAGCAGTTGTATTATTAGATCTATCAAGAAACCATATTTCAAGCAACATCCCTACAATCATTACTTTCTTAAAAACATTGCAGAAACTCTCTTTAGCGCATAACCAAATCTATGGGTCAATTCCCACATCACTTGGTGGCATGGTAAGCTTGATCTCCTTGGACTTGTCCCACAATATGCTAACTGGTGTTATTCCAAAATCCTTAGAATCACTTTTGTATCTTCAGAAAATCAACTTTTCTTATAATAGATTACAAGGAGAGATTCCTGATGGTGGACTTTTCAAAAATTGGACAGCTCAATCTTTTATGCACAATGAAGTTCTTTGCGGAAATCCTCGCCTACAGGTACCTCCATGTCTTAAACTTGTTAAGAAAAGTTCAAAGGCAAATAAGCTATTACTCAAATGCATGGTTCCCATAGTTGTGTCAATCATTTTCATTGTTGGAAGCATAATACTTTTGAAAGTTAACAAAAGAAAAAAGGTTGAAAATACTCTTGAAAGAGGTTTATCAACTTTAGGAGCTCCAAGAAGAATTTCTTATTATGAACTTGTGCAAGCAACAAATGGATTTAATGAGAGTAATTTGCTTGGAAGGGGTGGCTTTGGCTTTGTGTATCAGGGAAAACTTCCTGATGGTGAGATGATTGCTGTCAAAGTAATTGATTTGCAGTCGGAGGAAATATCAAAGAGCTTTGACGTGGAATGTAACACAATGAGAAATCTACGACATCGAAATTTAATTAAGATTATCAGCAGTTGTTCAAATCTTGATTTCAAGTCGTTGGTGATGGAGTTCTTGTTAAATGGAAGTTTGGAAAAATGGTTATATTCAAATAACTATTGCTTAAATTTCATGCAAAGGTTAAATATAATGATAGATGTTGCATCTGCATTGGAATACCTCCATCATGATTCTTCAATACCAGTGGTTCATTGTGATCTAAAGCCTACTAATGTGTTGTTGGATGAAGATATGGTTGCACATGTTAGCGATTTCGGTATTGCAAAGCTCATGGATGAAGGGCAATCTAAAACTCATACACAGACTTTGGCTACTATTGGATACCTTGCACCAGAATATGGCTCTAAAGGAATTGTTTCTGTAAAAGGAGATGTATATAGCTATGGAATCATGCTAATGGAAATCTTCACCAGAAGGAAACCAACAGATGATATGTTTAATGTAGAATTAAGTTTGAAAACATGGATCAGTGGATCATTGCCAAGTTCAATTATAGAGGTTGTGGATTCTAATTTAATCAAACAAAATGAGAAATATATGGATGACATGTTGACTTGTATGTCAACTATTTTTGATATAGCCTTGGATTGTTGTGAGAATTCACCGGAAGCAACAATTAACATGACAGATGTTAGTGCATCACTGATCAAAATCAAAACTATGGTACTTGCCCATAACGAGGTTTAG 3036 0.3452 MKNLLFCLFLFSFSFFCFFACSIASIKNISTDESALLAIKSLITSDPYNMLSNNWSSSYSVCNWVGISCDKKHNRVHSLNLTSMDLRGTLSPNIGNLSFLVILDLSNNSFGGQLPKEICWLRRLKALEVNHNEFVGGIPIALGELSQLVYLDLSFNNLNGFIPQSIHNLSKLVYLDFEKNSIEGTIPSAVGRLHRLKSLNIGENEMSGLLPKEISNLSSLAGLFLSSNSFSGPIPEEIGYLDQLEYLILANNSFNGSLPSKLLNISSLEGLYLEKNYFSGKIQSNTRYSLPKLLSLHLNQNNFVGNIPNCIFNASNLIQLQLSFNAFSGTLPNTAFGDLRFLEVFLIYYNDLTINDSFQFFTSLTNCRNLKYIGLSGNYIQSSLPKSIGNLTSESFEVDSCGINGNIPIEIGNMSNLLFFSLIGNNIIGPIPSTFKGLQKLQSLYLSDNRIKGSFIEELCEIKSLGELYLGNNKLSGVLPACLGNMTSLIKIHVGYNNLNSKIPTSLWSLRDILEVNLSSNTFIGNLPPKIGNLRAVVLLDLSRNHISSNIPTIITFLKTLQKLSLAHNQIYGSIPTSLGGMVSLISLDLSHNMLTGVIPKSLESLLYLQKINFSYNRLQGEIPDGGLFKNWTAQSFMHNEVLCGNPRLQVPPCLKLVKKSSKANKLLLKCMVPIVVSIIFIVGSIILLKVNKRKKVENTLERGLSTLGAPRRISYYELVQATNGFNESNLLGRGGFGFVYQGKLPDGEMIAVKVIDLQSEEISKSFDVECNTMRNLRHRNLIKIISSCSNLDFKSLVMEFLLNGSLEKWLYSNNYCLNFMQRLNIMIDVASALEYLHHDSSIPVVHCDLKPTNVLLDEDMVAHVSDFGIAKLMDEGQSKTHTQTLATIGYLAPEYGSKGIVSVKGDVYSYGIMLMEIFTRRKPTDDMFNVELSLKTWISGSLPSSIIEVVDSNLIKQNEKYMDDMLTCMSTIFDIALDCCENSPEATINMTDVSASLIKIKTMVLAHNEV 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00680 1011 SMART serkin_6 726 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00680 1011 SUPERFAMILY L domain-like 42 392 - -
Vivi7g00680 1011 PANTHER UNNAMED PRODUCT 336 928 - -
Vivi7g00680 1011 ProSitePatterns Protein kinases ATP-binding region signature. 732 754 IPR017441 GO:0005524
Vivi7g00680 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 845 857 IPR008271 GO:0004672|GO:0006468
Vivi7g00680 1011 SUPERFAMILY L domain-like 398 647 - -
Vivi7g00680 1011 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 363 657 - -
Vivi7g00680 1011 Gene3D Ribonuclease Inhibitor 182 289 IPR032675 -
Vivi7g00680 1011 Gene3D Transferase(Phosphotransferase) domain 1 802 1009 - -
Vivi7g00680 1011 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 802 1010 - -
Vivi7g00680 1011 Gene3D Ribonuclease Inhibitor 28 181 IPR032675 -
Vivi7g00680 1011 SMART LRR_sd22_2 193 219 - -
Vivi7g00680 1011 SMART LRR_sd22_2 438 461 - -
Vivi7g00680 1011 SMART LRR_sd22_2 145 171 - -
Vivi7g00680 1011 SMART LRR_sd22_2 558 584 - -
Vivi7g00680 1011 Pfam Protein tyrosine and serine/threonine kinase 730 996 IPR001245 GO:0004672|GO:0006468
Vivi7g00680 1011 Pfam Leucine rich repeat 560 619 IPR001611 GO:0005515
Vivi7g00680 1011 Pfam Leucine rich repeat 122 182 IPR001611 GO:0005515
Vivi7g00680 1011 Gene3D Phosphorylase Kinase; domain 1 709 801 - -
Vivi7g00680 1011 SMART LRR_typ_2 558 581 IPR003591 -
Vivi7g00680 1011 SMART LRR_typ_2 438 457 IPR003591 -
Vivi7g00680 1011 SMART LRR_typ_2 145 168 IPR003591 -
Vivi7g00680 1011 SMART LRR_typ_2 169 193 IPR003591 -
Vivi7g00680 1011 SMART LRR_typ_2 582 605 IPR003591 -
Vivi7g00680 1011 SMART LRR_typ_2 241 265 IPR003591 -
Vivi7g00680 1011 SMART LRR_typ_2 97 121 IPR003591 -
Vivi7g00680 1011 SMART LRR_typ_2 486 510 IPR003591 -
Vivi7g00680 1011 SMART LRR_typ_2 462 485 IPR003591 -
Vivi7g00680 1011 SMART LRR_typ_2 290 314 IPR003591 -
Vivi7g00680 1011 SMART LRR_typ_2 315 338 IPR003591 -
Vivi7g00680 1011 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 189 282 - -
Vivi7g00680 1011 ProSiteProfiles Protein kinase domain profile. 726 1011 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00680 1011 SUPERFAMILY Protein kinase-like (PK-like) 707 998 IPR011009 -
Vivi7g00680 1011 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Vivi7g00680 1011 Gene3D Ribonuclease Inhibitor 290 654 IPR032675 -
Vivi7g00680 1011 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 29 188 - -
Vivi7g00680 1011 FunFam Serine-threonine protein kinase plant-type 707 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00680 Vivi-Chr7 41291939 41296826 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00680 31 1002 Receptor kinase-like Gene Family AT3G47570 37.787 0.0 646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Vivi7g00680 PK_Tyr_Ser-Thr 1.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00680 - - mtr:25481440 1145.57