Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00559 ATGGATTATCTGATACAGTATAGACCAGTTATAGACATGTGGAGCATTGGCTGCATATTTGCAGAACTTTTAACCGGAAAACCTCTTTTCCCTGGGAAGAATGTTGTCCATCAATTGGATATCATGACTGATTTTCTTGAAACACCATCTCCTGATGCCATTGCAAGGAATACGACTGAGGTTGCAGAGGATTTATCCAAATGTTGCATCAAAGAAGTTGAGAAACCGCCTGTAGATAGGAGTAATGTTATTCTTTCGATGACCCGACTTCCTTTTCAAACTCCTCAAAATGTTCAAGGTCTTGCTGCAAGGCCCGAAAAATTTGTTGGTTCTGCAATGCATTATAATAACTGTGGGGTGGCAGCAGAAATCGAACAACGGAGGGTGGTTAGGAATGCATCTATTTTGAATCAGTATGCGGCTTCAAGTTATCGGCGGAGAAATCCAAACTATAAAAGCGAGAGGATAGAAGATGATGCGATTGAAGGTTCTAACGGGATGCAACCAAAGCTTCAATACATAGCAAGGAAAGTTGCTGCTGCTCAAGACGAAGCAGGTAGCCACTGGTATTGA 573 0.4188 MDYLIQYRPVIDMWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDFLETPSPDAIARNTTEVAEDLSKCCIKEVEKPPVDRSNVILSMTRLPFQTPQNVQGLAARPEKFVGSAMHYNNCGVAAEIEQRRVVRNASILNQYAASSYRRRNPNYKSERIEDDAIEGSNGMQPKLQYIARKVAAAQDEAGSHWY 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00559 190 Pfam Protein kinase domain 6 72 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00559 190 Gene3D Transferase(Phosphotransferase) domain 1 6 70 - -
Vivi7g00559 190 ProSiteProfiles Protein kinase domain profile. 1 93 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00559 190 SUPERFAMILY Protein kinase-like (PK-like) 6 58 IPR011009 -
Vivi7g00559 190 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 7 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00559 Vivi-Chr7 33156986 33160018 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00559 3 62 MAP Kinase Gene Family AT5G19010 71.667 3.98e-24 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Vivi7g00559 Pkinase 5.3e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00559 - - vvo:131617096 387.497