Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00532 ATGGGATGCTCTTATTCATTACCAACAATGGCTTTCTTTTTCTTCTTCCGTCTCTTTTTACTCCTTCCTTTCTTCTTTCATTCGTTTTCTCTCGGAGCCACTCTTCACGACGATGAAGTGAAAGCTTTGATAGACATAGCCAAAACACTTGGGAAGAATGATTGGAACTTCAGTGTAGATCCATGTAGTGGAAGGAACAACTGGATATCGACAACTCAATCACCAGGTTTTGAAAATGCTGTTACTTGCAATTGCTCTTTTCAAAATAACACTCTCTGCCATGTTGTTAGCGTTGTCCTCAAAGCACAAAACCTTTCTGGTACTCTTCCACCTGATCTTGTGAGGTTGCCTTTTCTCCAAGAAATTGACCTAACCCTCAACTATCTTAATGGAACAATCCCTAAAGAATTGGCTACATTAAGTCTTGTAAACATTTCCTTCTATGGAAATCGTCTATCCGGTCCAATTCCAAAGGAGTTTGGAAACATCCCCTCTCTCAGAAGCTTGGTATTGGAATTCAACCAACTATCAGGAAATCTTCCTCCTGAACTTGGGAGTCTTAACAAGATTGAAAGACTGCTTCTTTCCTCCAACAACTTCACTGGAGTGTTACCTGCAACATTTGCTAAGCTCACTGCATTGAAGCAATTTCGAATTGGTGACAGTCAATTCTCTGGAGCAATACCCAACTTTATACAGAACTGGAAAAATCTTGAGATGCTGGTGATCCGAGGGAGCGGTTTGAGTGGACCAATTCCTTCTGGAATTTCACTTCTGAAAAATCTCACTGACTTAACTATTACTGACTTGAATGGATCTGATTCACCTTTTCCACAACTTGAAAATATGTCAAAGTTGTCAATGTTAGTGTTGAGAAGTTGCTATATCATTGGAGCAATGCCCAAGGATCTTGGAAAGTTAATTAATCTGAAATGGATAGACCTCAACAACAACAAATTAAGTGGACCAATCCCGGCAAGCTTCCGTGATCGACAGAACGTGAAAATGCTATTTTTATCTGGGAATCAGTTGACGGGGTCGGTGCCTGACTGGATAGATAAACCAAACTCTGTAGACCTGTCATATAATAACTTCACTATAACAAACTCTGAGCAGCAGGCTTGTCAGCAAAGAAATGTGAACATGTTTGCATCTTATTTGAAGGGAAACAGCTTAGGAAATATTTCCTGTTTGGAAAACTATCAATGTCCTACAACTTGGTACTCTCTCTATATAAATTGTGGTGGAAAGAGCATAACGTTTGGAAATAAGACATATGATGATGATTCAAATGACATGGGACTAGCAAGGTATCGTCAATTAGGAACAAACTGGGCACTTATAACTTCGGGTAAATTCTTTGGTAGCAACCACGCTGACTACTACAAATGGTCTAATGCAACAAAGCTTTCTGTCATCAACGATCCTGAACTTTACATGGATGCACGTGTTTCTCCAAATTCTCTAAATTATTATGGATTCTGCCTTGGAAATGGAAACTACACTGTAAATCTCCATTTTGCAGAAATAATGTTCAGTGATGATAAAACATTTAGCAGCATTGGAAGACGTGTGTTTGACATCTACATTCAGAGAAAGTTGGTGGAGAAGGATTTCGATATTGCAAAAGAGGCAGGTGGAGTTGGCAAGGCAGTCGTTAAAAGTTTTACTGCTACTGTGACTAGTAATGGGTTGGAGATTCGCTTATATTGGGCTGGAAAAGGAACAACTACTATCCCATTTGGATCAGTATATGGTCCTCTTATATCAGCTATATCAGTTGATCATAACTTTACACCTCCGTCGGAAAATAATAGAAGCATTCCTGTAGGGGTTGAGGCTGCCATTGTGGTTGTAGGAGCAATTGTTATCATCTTTGTAATTAGCATAATATGGTGGAAGGGATGTTTAACACAAAAGTGTTTAGGGGGGAGAGGGAAAAAGAGTTTTGCTTCAGAAAGTGGCTTATTGACCTTACGGCAAATCAAAGTAGCAACAAACAACTTTGATGAATCCTTCAAGATTGGAGAAGGAGGATTTGGCCCGGTTTACAAGGGAGTTCTGCCAGATGGCACAATAGTAGCGATTAAGCAGCTATCTTCTAAATCAACTCAAGGATCTCGTGAATTTATTAATGAGATAGGCATGATTTCTACTTTACAACACCCTAATCTTGTTAAGCTTTATGGCTTCTGTATGGAAGATGATCAGTTGTTGTTGATATATGAATACATGGAAAACAATAGCCTTGCTCATGCTTTATTTGCCAAGAAACAAGACCTAGAAAATCGTCAATTGAGATTGGATTGGAAAACGAGGAAGAGGATTTGTATTGATATATCTAAAGGTTTAGCCTACCTTCACGGAGAGTCAAAAATAAAGATCATTCATAGGGACATCAAGGCCACTAATGTATTGCTAGATAAAGACCTCAACCCCAAGATATCTGATTTTGGTTTGGCAAAACTCAATGAAGATGACAAAACCCACATGAACACCAGAATAGCTGGCACTTATGGATACATGGCTCCTGAGTATGCTATGCATGGTTATTTGACGGAAAAAGCAGATGTTTATAGTTTTGGAATCGTTGTGTTGGAAATTGTTAGCGGAACAAGCAACACCGTTATCCATCCTCAGGAGGAATGCTTCTCTCTTCTTGATTGGGTGCACCTTTTGAAGGAAAAAGATAACCTAATGGAGCTCGTTGATCAGAGATTGGGCGGAGACTTCAAGAAAGAGGAGGTAACGACGATGATCAATGTGGCTCTTGTATGCACTAGTTTTTCTCCATCGCTCAGGCCCTCCATGTCTTTAGTAGTTAGCATGCTTGAAGGAAGAACAGATGTTCAAGAAGTGGTAGCAGAATCAACTGAGGTATTGGATGATAAGAAGTATAAGGTGATGCAACAATACTACAAACAGAGGGGAGAAAGTAGCACAAGTGAAGTTCAAAGCGTCACAACAGATGAATCTAATGCCCTTATTTCTGATACAGATTCTTCATACTGGGAACCAAGAAATAATCAAAGCTATAAAACTATGTAA 3048 0.3934 MGCSYSLPTMAFFFFFRLFLLLPFFFHSFSLGATLHDDEVKALIDIAKTLGKNDWNFSVDPCSGRNNWISTTQSPGFENAVTCNCSFQNNTLCHVVSVVLKAQNLSGTLPPDLVRLPFLQEIDLTLNYLNGTIPKELATLSLVNISFYGNRLSGPIPKEFGNIPSLRSLVLEFNQLSGNLPPELGSLNKIERLLLSSNNFTGVLPATFAKLTALKQFRIGDSQFSGAIPNFIQNWKNLEMLVIRGSGLSGPIPSGISLLKNLTDLTITDLNGSDSPFPQLENMSKLSMLVLRSCYIIGAMPKDLGKLINLKWIDLNNNKLSGPIPASFRDRQNVKMLFLSGNQLTGSVPDWIDKPNSVDLSYNNFTITNSEQQACQQRNVNMFASYLKGNSLGNISCLENYQCPTTWYSLYINCGGKSITFGNKTYDDDSNDMGLARYRQLGTNWALITSGKFFGSNHADYYKWSNATKLSVINDPELYMDARVSPNSLNYYGFCLGNGNYTVNLHFAEIMFSDDKTFSSIGRRVFDIYIQRKLVEKDFDIAKEAGGVGKAVVKSFTATVTSNGLEIRLYWAGKGTTTIPFGSVYGPLISAISVDHNFTPPSENNRSIPVGVEAAIVVVGAIVIIFVISIIWWKGCLTQKCLGGRGKKSFASESGLLTLRQIKVATNNFDESFKIGEGGFGPVYKGVLPDGTIVAIKQLSSKSTQGSREFINEIGMISTLQHPNLVKLYGFCMEDDQLLLIYEYMENNSLAHALFAKKQDLENRQLRLDWKTRKRICIDISKGLAYLHGESKIKIIHRDIKATNVLLDKDLNPKISDFGLAKLNEDDKTHMNTRIAGTYGYMAPEYAMHGYLTEKADVYSFGIVVLEIVSGTSNTVIHPQEECFSLLDWVHLLKEKDNLMELVDQRLGGDFKKEEVTTMINVALVCTSFSPSLRPSMSLVVSMLEGRTDVQEVVAESTEVLDDKKYKVMQQYYKQRGESSTSEVQSVTTDESNALISDTDSSYWEPRNNQSYKTM 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00532 1015 Gene3D - 412 597 - -
Vivi7g00532 1015 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 36 271 - -
Vivi7g00532 1015 Gene3D Ribonuclease Inhibitor 217 411 IPR032675 -
Vivi7g00532 1015 Pfam Leucine rich repeat 285 344 IPR001611 GO:0005515
Vivi7g00532 1015 Pfam Malectin domain 409 592 IPR021720 -
Vivi7g00532 1015 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 640 744 - -
Vivi7g00532 1015 FunFam Putative LRR receptor-like serine/threonine-protein kinase 745 956 - -
Vivi7g00532 1015 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 277 368 - -
Vivi7g00532 1015 Gene3D Phosphorylase Kinase; domain 1 643 744 - -
Vivi7g00532 1015 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 20 978 - -
Vivi7g00532 1015 Pfam Protein kinase domain 672 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00532 1015 ProSitePatterns Serine/Threonine protein kinases active-site signature. 795 807 IPR008271 GO:0004672|GO:0006468
Vivi7g00532 1015 SUPERFAMILY Protein kinase-like (PK-like) 653 945 IPR011009 -
Vivi7g00532 1015 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 407 597 - -
Vivi7g00532 1015 Gene3D Transferase(Phosphotransferase) domain 1 745 971 - -
Vivi7g00532 1015 CDD STKc_IRAK 675 946 - -
Vivi7g00532 1015 Gene3D Ribonuclease Inhibitor 36 216 IPR032675 -
Vivi7g00532 1015 SMART serkin_6 669 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00532 1015 ProSiteProfiles Protein kinase domain profile. 669 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00532 1015 SUPERFAMILY L domain-like 89 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00532 Vivi-Chr7 31950211 31959748 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00532 29 994 Receptor kinase-like Gene Family AT1G53420 51.279 0.0 951
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi7g00532 Pkinase 1.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00532 - - gmx:100798947 1287.71