Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00530 ATGGGATGCTCTTATTCATTACCAACAATGGCTTTCTTTTTCTTCTTCCGTCTCTTTTTACTCCTTCCTTTCTTCTTTCATTCGTTTTCTCTCGGAGCCACTCTTCACGACGATGAAGTGAAAGCTTTGATAGACATAGCCAAAACACTTGGGAAGAATGATTGGAACTTCAGTGTAGATCCATGTAGTGGAAGGAACAACTGGATATCGACAACTCAATCACCAGGTTTTGAAAATGCTGTTACTTGCAATTGCTCTTTTCAAAATAACACTCTCTGCCATGTTGTTAGCGTTGTCCTCAAAGCACAAAACCTTTCTGGTACTCTTCCACCTGATCTTGTGAGGTTGCCTTTTCTCCAAGAAATTGACCTAACCCTCAACTATCTTAATGGAACAATCCCTAAAGAATTGGCTACATTAAGTCTTGTAAACATTTCCTTCTATGGAAATCGTCTATCCGGTCCAATTCCAAAGGAGTTTGGAAACATCCCCTCTCTCAGAAGCTTGCTTCTTTCCTCCAACAACTTCACTGGAGTGTTACCTGCAACATTTGCTAAGCTCACTGCATTGAAGCAATTTCAATTCTCTGGAGCAATACCCAACTTTATACAGAACTGGAAAAATCTTGAGATGCTGGTGATCCGAGGGAGCGGTTTGAGTGGACCAATTCCTTCTGGAATTTCACTTCTGAAAAATCTCACTGACTTAACTATTACTGACTTGAATGGATCTGATTCACCTTTTCCACAACTTGAAAATATGTCAAAGTTGTCAATGTTAGTGTTGAGAAGTTGCTATATCATTGGAGCAATGCCCAAGGATCTTGGAAAGTTAATTAATCTGAAATGGATAGACCTCAACAACAACAAATTAAGTGGACCAATCCCGGCAAGCTTCCGTGATCGACAGAACGTGAAAATGCTATTTTTATCTGGGAATCAGTTGACGGGGTCGGTGCCTGACTGGATAGATAAACCAAACTCTGTAGACCTGTCATATAATAACTTCACTATAACAAACTCTGAGCAGCAGGCTTGTCAGCAAAGAAATGTGAACATGTTTGCATCTTATTTGAAGGGAAACAGCTTAGGAAATATTTCCTGTTTGGAAAACTATCAATGTCCTACAACTTGGTACTCTCTCTATATAAATTGTGGTGGAAAGAGCATAACGTTTGGAAATAAGACATATGATGATGATTCAAATGACATGGGACTAGCAAGGTATCGTCAATTAGGAACAAACTGGGCACTTATAACTTCGGGTAAATTCTTTGGTAGCAACCACGCTGACTACTACAAATGGTCTAATGCAACAAAGCTTTCTGTCATCAACGATCCTGAACTTTACATGGATGCACGTGTTTCTCCAAATTCTCTAAATTATTATGGATTCTGCCTTGGAAATGGAAACTACACTGTAAATCTCCATTTTGCAGAAATAATGTTCAGTGATGATAAAACATTTAGCAGCATTGGAAGACGTGTGTTTGACATCTACATTCAGAGAAAGTTGGTGGAGAAGGATTTCGATATTGCAAAAGAGGCAGGTGGAGTTGGCAAGGCAGTCGTTAAAAGTTTTACTGCTACTGTGACTAGTAATGGGTTGGAGATTCGCTTATATTGGGCTGGAAAAGGAACAACTACTATCCCATTTGGATCAGTATATGGTCCTCTTATATCAGCTATATCAGTTGATCATAACTTTACACCTCCGTCGGAAAATAATAGAAGCATTCCTGTAGGGGTTGAGGCTGCCATTGTGGTTGTAGGAGCAATTGTTATCATCTTTGTAATTAGCATAATATGGTGGAAGGGATGTTTAACACAAAAGTGTTTAGGGGGGAGAGGGAAAAAGAGTTTTGCTTCAGAAAGTGGCTTATTGACCTTACGGCAAATCAAAGTAGCAACAAACAACTTTGATGAATCCTTCAAGATTGGAGAAGGAGGATTTGGCCCGGTTTACAAGGGAGTTCTGCCAGATGGCACAATAGTAGCGATTAAGCAGCTATCTTCTAAATCAACTCAAGGATCTCGTGAATTTATTAATGAGATAGGCATGATTTCTACTTTACAACACCCTAATCTTGTTAAGCTTTATGGCTTCTGTATGGAAGATGATCAGTTGTTGTTGATATATGAATACATGGAAAACAATAGCCTTGCTCATGCTTTATTTGCCAAGAAACAAGACCTAGAAAATCGTCAATTGAGATTGGATTGGAAAACGAGGAAGAGGATTTGTATTGATATATCTAAAGGTTTAGCCTACCTTCACGGAGAGTCAAAAATAAAGATCATTCATAGGGACATCAAGGCCACTAATGTATTGCTAGATAAAGACCTCAACCCCAAGATATCTGATTTTGGTTTGGCAAAACTCAATGAAGATGACAAAACCCACATGAACACCAGAATAGCTGGCACTTATGGATACATGGCTCCTGAGTATGCTATGCATGGTTATTTGACGGAAAAAGCAGATGTTTATAGTTTTGGAATCGTTGTGTTGGAAATTGTTAGCGGAACAAGCAACACCGTTATCCATCCTCAGGAGGAATGCTTCTCTCTTCTTGATTGGGTGCACCTTTTGAAGGAAAAAGATAACCTAATGGAGCTCGTTGATCAGAGATTGGGCGGAGACTTCAAGAAAGAGGAGGTAACGACGATGATCAATGTGGCTCTTGTATGCACTAGTTTTTCTCCATCGCTCAGGCCCTCCATGTCTTTAGTAGTTAGCATGCTTGAAGGAAGAACAGATGTTCAAGAAGTGGTAGCAGAATCAACTGAGGTATTGGATGATAAGAAGTATAAGGTGATGCAACAATACTACAAACAGAGGGGAGAAAGTAGCACAAGTGAAGTTCAAAGCGTCACAACAGATGAATCTAATGCCCTTATTTCTGATACAGATTCTTCATACTGGGAACCAAGAAATAATCAAAGCTATAAAACTATGTAA 2961 0.3931 MGCSYSLPTMAFFFFFRLFLLLPFFFHSFSLGATLHDDEVKALIDIAKTLGKNDWNFSVDPCSGRNNWISTTQSPGFENAVTCNCSFQNNTLCHVVSVVLKAQNLSGTLPPDLVRLPFLQEIDLTLNYLNGTIPKELATLSLVNISFYGNRLSGPIPKEFGNIPSLRSLLLSSNNFTGVLPATFAKLTALKQFQFSGAIPNFIQNWKNLEMLVIRGSGLSGPIPSGISLLKNLTDLTITDLNGSDSPFPQLENMSKLSMLVLRSCYIIGAMPKDLGKLINLKWIDLNNNKLSGPIPASFRDRQNVKMLFLSGNQLTGSVPDWIDKPNSVDLSYNNFTITNSEQQACQQRNVNMFASYLKGNSLGNISCLENYQCPTTWYSLYINCGGKSITFGNKTYDDDSNDMGLARYRQLGTNWALITSGKFFGSNHADYYKWSNATKLSVINDPELYMDARVSPNSLNYYGFCLGNGNYTVNLHFAEIMFSDDKTFSSIGRRVFDIYIQRKLVEKDFDIAKEAGGVGKAVVKSFTATVTSNGLEIRLYWAGKGTTTIPFGSVYGPLISAISVDHNFTPPSENNRSIPVGVEAAIVVVGAIVIIFVISIIWWKGCLTQKCLGGRGKKSFASESGLLTLRQIKVATNNFDESFKIGEGGFGPVYKGVLPDGTIVAIKQLSSKSTQGSREFINEIGMISTLQHPNLVKLYGFCMEDDQLLLIYEYMENNSLAHALFAKKQDLENRQLRLDWKTRKRICIDISKGLAYLHGESKIKIIHRDIKATNVLLDKDLNPKISDFGLAKLNEDDKTHMNTRIAGTYGYMAPEYAMHGYLTEKADVYSFGIVVLEIVSGTSNTVIHPQEECFSLLDWVHLLKEKDNLMELVDQRLGGDFKKEEVTTMINVALVCTSFSPSLRPSMSLVVSMLEGRTDVQEVVAESTEVLDDKKYKVMQQYYKQRGESSTSEVQSVTTDESNALISDTDSSYWEPRNNQSYKTM 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00530 986 ProSitePatterns Serine/Threonine protein kinases active-site signature. 766 778 IPR008271 GO:0004672|GO:0006468
Vivi7g00530 986 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 20 949 - -
Vivi7g00530 986 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 248 339 - -
Vivi7g00530 986 Gene3D Transferase(Phosphotransferase) domain 1 716 942 - -
Vivi7g00530 986 SMART serkin_6 640 915 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00530 986 SUPERFAMILY L domain-like 86 330 - -
Vivi7g00530 986 Pfam Malectin domain 380 563 IPR021720 -
Vivi7g00530 986 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 41 196 - -
Vivi7g00530 986 Pfam Protein kinase domain 643 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00530 986 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 611 715 - -
Vivi7g00530 986 Pfam Leucine rich repeat 256 315 IPR001611 GO:0005515
Vivi7g00530 986 ProSiteProfiles Protein kinase domain profile. 640 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00530 986 SUPERFAMILY Protein kinase-like (PK-like) 624 916 IPR011009 -
Vivi7g00530 986 Gene3D Phosphorylase Kinase; domain 1 614 715 - -
Vivi7g00530 986 Gene3D Ribonuclease Inhibitor 36 194 IPR032675 -
Vivi7g00530 986 FunFam Putative LRR receptor-like serine/threonine-protein kinase 716 927 - -
Vivi7g00530 986 CDD STKc_IRAK 646 917 - -
Vivi7g00530 986 Gene3D Ribonuclease Inhibitor 195 359 IPR032675 -
Vivi7g00530 986 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 378 568 - -
Vivi7g00530 986 Gene3D - 379 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00530 Vivi-Chr7 31950210 31959748 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00530 29 965 Receptor kinase-like Gene Family AT1G53420 49.335 0.0 900
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi7g00530 Pkinase 1.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00530 - - gmx:100798947 1214.52