Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00529 ATGGGATGCTCTTATTCATTACCAACAATGGCTTTCTTTTTCTTCTTCCGTCTCTTTTTACTCCTTCCTTTCTTCTTTCATTCGTTTTCTCTCGGAGCCACTCTTCACGACGATGAAGTGAAAGCTTTGATAGACATAGCCAAAACACTTGGGAAGAATGATTGGAACTTCAGTGTAGATCCATGTAGTGGAAGGAACAACTGGATATCGACAACTCAATCACCAGGTTTTGAAAATGCTGTTACTTGCAATTGCTCTTTTCAAAATAACACTCTCTGCCATGTTGTTAGCGTTGTCCTCAAAGCACAAAACCTTTCTGGTACTCTTCCACCTGATCTTGTGAGGTTGCCTTTTCTCCAAGAAATTGACCTAACCCTCAACTATCTTAATGGAACAATCCCTAAAGAATTGGCTACATTAAGTCTTGTAAACATTTCCTTCTATGGAAATCGTCTATCCGGTCCAATTCCAAAGGAGTTTGGAAACATCCCCTCTCTCAGAAGCTTGCTTCTTTCCTCCAACAACTTCACTGGAGTGTTACCTGCAACATTTGCTAAGCTCACTGCATTGAAGCAATTTCGAATTGGTGACAGTCAATTCTCTGGAGCAATACCCAACTTTATACAGAACTGGAAAAATCTTGAGATGCTGGTGATCCGAGGGAGCGGTTTGAGTGGACCAATTCCTTCTGGAATTTCACTTCTGAAAAATCTCACTGACTTAACTATTACTGACTTGAATGGATCTGATTCACCTTTTCCACAACTTGAAAATATGTCAAAGTTGTCAATGTTAGTGTTGAGAAGTTGCTATATCATTGGAGCAATGCCCAAGGATCTTGGAAAGTTAATTAATCTGAAATGGATAGACCTCAACAACAACAAATTAAGTGGACCAATCCCGGCAAGCTTCCGTGATCGACAGAACGTGAAAATGCTATTTTTATCTGGGAATCAGTTGACGGGGTCGGTGCCTGACTGGATAGATAAACCAAACTCTGTAGACCTGTCATATAATAACTTCACTATAACAAACTCTGAGCAGCAGGCTTGTCAGCAAAGAAATGTGAACATGTTTGCATCTTATTTGAAGGGAAACAGCTTAGGAAATATTTCCTGTTTGGAAAACTATCAATGTCCTACAACTTGGTACTCTCTCTATATAAATTGTGGTGGAAAGAGCATAACGTTTGGAAATAAGACATATGATGATGATTCAAATGACATGGGACTAGCAAGGTATCGTCAATTAGGAACAAACTGGGCACTTATAACTTCGGGTAAATTCTTTGGTAGCAACCACGCTGACTACTACAAATGGTCTAATGCAACAAAGCTTTCTGTCATCAACGATCCTGAACTTTACATGGATGCACGTGTTTCTCCAAATTCTCTAAATTATTATGGATTCTGCCTTGGAAATGGAAACTACACTGTAAATCTCCATTTTGCAGAAATAATGTTCAGTGATGATAAAACATTTAGCAGCATTGGAAGACGTGTGTTTGACATCTACATTCAGAGAAAGTTGGTGGAGAAGGATTTCGATATTGCAAAAGAGGCAGGTGGAGTTGGCAAGGCAGTCGTTAAAAGTTTTACTGCTACTGTGACTAGTAATGGGTTGGAGATTCGCTTATATTGGGCTGGAAAAGGAACAACTACTATCCCATTTGGATCAGTATATGGTCCTCTTATATCAGCTATATCAGTTGATCATAACTTTACACCTCCGTCGGAAAATAATAGAAGCATTCCTGTAGGGGTTGAGGCTGCCATTGTGGTTGTAGGAGCAATTGTTATCATCTTTGTAATTAGCATAATATGGTGGAAGGGATGTTTAACACAAAAGTGTTTAGGGGGGAGAGGGAAAAAGAGTTTTGCTTCAGAAAGTGGCTTATTGACCTTACGGCAAATCAAAGTAGCAACAAACAACTTTGATGAATCCTTCAAGATTGGAGAAGGAGGATTTGGCCCGGTTTACAAGGGAGTTCTGCCAGATGGCACAATAGTAGCGATTAAGCAGCTATCTTCTAAATCAACTCAAGGATCTCGTGAATTTATTAATGAGATAGGCATGATTTCTACTTTACAACACCCTAATCTTGTTAAGCTTTATGGCTTCTGTATGGAAGATGATCAGTTGTTGTTGATATATGAATACATGGAAAACAATAGCCTTGCTCATGCTTTATTTGCCAAGAAACAAGACCTAGAAAATCGTCAATTGAGATTGGATTGGAAAACGAGGAAGAGGATTTGTATTGATATATCTAAAGGTTTAGCCTACCTTCACGGAGAGTCAAAAATAAAGATCATTCATAGGGACATCAAGGCCACTAATGTATTGCTAGATAAAGACCTCAACCCCAAGATATCTGATTTTGGTTTGGCAAAACTCAATGAAGATGACAAAACCCACATGAACACCAGAATAGCTGGCACTTATGGATACATGGCTCCTGAGTATGCTATGCATGGTTATTTGACGGAAAAAGCAGATGTTTATAGTTTTGGAATCGTTGTGTTGGAAATTGTTAGCGGAACAAGCAACACCGTTATCCATCCTCAGGAGGAATGCTTCTCTCTTCTTGATTGGGTGCACCTTTTGAAGGAAAAAGATAACCTAATGGAGCTCGTTGATCAGAGATTGGGCGGAGACTTCAAGAAAGAGGAGGTAACGACGATGATCAATGTGGCTCTTGTATGCACTAGTTTTTCTCCATCGCTCAGGCCCTCCATGTCTTTAGTAGTTAGCATGCTTGAAGGAAGAACAGATGTTCAAGAAGTGGTAGCAGAATCAACTGAGGTATTGGATGATAAGAAGTATAAGGTGATGCAACAATACTACAAACAGAGGGGAGAAAGTAGCACAAGTGAAGTTCAAAGCGTCACAACAGATGAATCTAATGCCCTTATTTCTGATACAGATTCTTCATACTGGGAACCAAGAAATAATCAAAGCTATAAAACTATGTAA 2976 0.3935 MGCSYSLPTMAFFFFFRLFLLLPFFFHSFSLGATLHDDEVKALIDIAKTLGKNDWNFSVDPCSGRNNWISTTQSPGFENAVTCNCSFQNNTLCHVVSVVLKAQNLSGTLPPDLVRLPFLQEIDLTLNYLNGTIPKELATLSLVNISFYGNRLSGPIPKEFGNIPSLRSLLLSSNNFTGVLPATFAKLTALKQFRIGDSQFSGAIPNFIQNWKNLEMLVIRGSGLSGPIPSGISLLKNLTDLTITDLNGSDSPFPQLENMSKLSMLVLRSCYIIGAMPKDLGKLINLKWIDLNNNKLSGPIPASFRDRQNVKMLFLSGNQLTGSVPDWIDKPNSVDLSYNNFTITNSEQQACQQRNVNMFASYLKGNSLGNISCLENYQCPTTWYSLYINCGGKSITFGNKTYDDDSNDMGLARYRQLGTNWALITSGKFFGSNHADYYKWSNATKLSVINDPELYMDARVSPNSLNYYGFCLGNGNYTVNLHFAEIMFSDDKTFSSIGRRVFDIYIQRKLVEKDFDIAKEAGGVGKAVVKSFTATVTSNGLEIRLYWAGKGTTTIPFGSVYGPLISAISVDHNFTPPSENNRSIPVGVEAAIVVVGAIVIIFVISIIWWKGCLTQKCLGGRGKKSFASESGLLTLRQIKVATNNFDESFKIGEGGFGPVYKGVLPDGTIVAIKQLSSKSTQGSREFINEIGMISTLQHPNLVKLYGFCMEDDQLLLIYEYMENNSLAHALFAKKQDLENRQLRLDWKTRKRICIDISKGLAYLHGESKIKIIHRDIKATNVLLDKDLNPKISDFGLAKLNEDDKTHMNTRIAGTYGYMAPEYAMHGYLTEKADVYSFGIVVLEIVSGTSNTVIHPQEECFSLLDWVHLLKEKDNLMELVDQRLGGDFKKEEVTTMINVALVCTSFSPSLRPSMSLVVSMLEGRTDVQEVVAESTEVLDDKKYKVMQQYYKQRGESSTSEVQSVTTDESNALISDTDSSYWEPRNNQSYKTM 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00529 991 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 253 344 - -
Vivi7g00529 991 Gene3D Phosphorylase Kinase; domain 1 619 720 - -
Vivi7g00529 991 ProSitePatterns Serine/Threonine protein kinases active-site signature. 771 783 IPR008271 GO:0004672|GO:0006468
Vivi7g00529 991 Gene3D - 384 573 - -
Vivi7g00529 991 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 616 720 - -
Vivi7g00529 991 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 20 954 - -
Vivi7g00529 991 CDD STKc_IRAK 651 922 - -
Vivi7g00529 991 SMART serkin_6 645 920 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00529 991 Gene3D Transferase(Phosphotransferase) domain 1 721 947 - -
Vivi7g00529 991 Pfam Leucine rich repeat 261 320 IPR001611 GO:0005515
Vivi7g00529 991 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 383 573 - -
Vivi7g00529 991 Pfam Malectin domain 385 568 IPR021720 -
Vivi7g00529 991 ProSiteProfiles Protein kinase domain profile. 645 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00529 991 Gene3D Ribonuclease Inhibitor 38 205 IPR032675 -
Vivi7g00529 991 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 41 203 - -
Vivi7g00529 991 Gene3D Ribonuclease Inhibitor 206 361 IPR032675 -
Vivi7g00529 991 Pfam Protein kinase domain 648 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00529 991 FunFam Putative LRR receptor-like serine/threonine-protein kinase 721 932 - -
Vivi7g00529 991 SUPERFAMILY Protein kinase-like (PK-like) 629 921 IPR011009 -
Vivi7g00529 991 SUPERFAMILY L domain-like 86 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00529 Vivi-Chr7 31950210 31959748 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00529 29 970 Receptor kinase-like Gene Family AT1G53420 49.539 0.0 912
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi7g00529 Pkinase 1.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00529 - - gmx:100798947 1229.16