Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00517 ATGACCATGCTTGCTATATCCGTGTTACTATTGTTATTGTTCAAAAATACCTCTGCAGCTGATACTATAACTCAGTCAGACTCACTTTCCGATGGAAGCACCTTGATTTCCAAAGATGAAACCTTCGAGTTGGGTTTCTTTACTCCCGGTAATTCTCCGAACCGATATGTTGGAATTTGGTACAAAAACATCCAGGTTAAAACCGTTGTTTGGGTTGCCAATCGGGATAATCCTATCAAAGACAACTCAAGCAAGTTGATCATAAACAAACAAGGAAATCTCGTTCTTCTCAACAGCAATCAGTCTCTTATATGGTCAACAAACACAACGAAGAAGGCTTCGACTCCAATTGTCCAGCTTCTGGAGAACGGAAATTTAGTGATCAGAGATGAGAAGGACACTGAAAGTTTCTTATGGCAGAGCTTTGACTATCCTACTGATACATTATTACCCGAAATGAAGCTTGGATGGGACAAGAGAACTGGTCTTAATAGGGTACAAACTGCATGGAAAAATTGGGAAGATCCGTCTTTAGGTGATTTTACATCATCTATGAGTCTTAGTAATAATCCTGAAGTGGTTCTTTTGAAAGGTAATTCAACTGAGTTCTACAGAACAGGACCTATGATTGGTGCTGAGTCTAGCGGAGTTTATGGAATGCAGGCTAACCCAATTTTTAATCCAGAGGTTGTAAACAATGAAGATGAAGCTTATTTTTTGTTCACCCTAAAGAACAAATCTGTGATTTCCATAGTTGTTTTAAACCAAACTAGTATGATTCTTCAACGCCTTGTATGGATTCCTCAATCTAGAAAATGGAGTAACTACTTGAACCTACCACATGATACTTGTGATACTTATAATGTATGTGGACCATATGGATATTGCGTCATTGACGCATCACCAATTTGTCAGTGTTTGGATGGGTTTAAGCCAAAATCACCCCAACAGTGGAACACAATGGACTGGGCAGATGGATGTGTGCACACTGGAAATTGGAGCTGTGGAGTGAAGGGTAGAGATGGTTTTCTTAAAGTAACTGGAGTGAAATTGCCAGATACTACAAATACATGGGTTGATGCAAATATAACACTTGATGATTGCAAGCTCAAATGTTTGCAAAATTGTTCCTGCACAGCTTACTCAAGCTTAACCTCAAATGAAGATAGTGGCGGTTGTTCCATATGGTTTAAAGATCTTAAAGACTTGAGAGACTCAGATTCTAAGAGAAACTTATATGTTAGAATTGATGGATCAAATATAGGTGATAAACATGACTATACAAAAATGGCTATCTTGGTAGTTTCCATCATTGTTTTTGCATTCACTGTGATGCTATTGACACTATGCATTTATAGAAAAAAGATAAAGAACAAAGAAGACAATAATGAAGGTGAGGATTATGATTTAGACCTCCCTTGCTTTGATCTTGCTACAATATTTGAGGCCACTAATAATTTCACAAATGCCAACAAATTAGGCGAAGGTGGTTTTGGACCGGTTTACAAGGGTAAGTTGCAAGATGGTCAAGAAATTGCAGTCAAAAGACTATCAAGGAGTTCTGGACAAGGATTGAATGAATTTAAGAACGAAGTTATTTTATGTTCTAAACTTCAACATCGAAATCTTATTAAGATAATTGGCTATTGTGTTGAAAGCGATGAAAAAATGTTGATCTATGAATACATGTCGAACACAAGTCTAGATTCATTTATTTTTGATCCAATTCAAAGTAAAGTATTAGATTGGCCTATGCGTTTTAACATTTTGTATGGAATTGCCCGAGGTCTTCTTTATCTACATCAAGACTCAAGGTTTAGAATCATACATAGAGATTTAAAAGCAAGTAATATTTTATTAGACCGAGATATGAATCCAAAAATATCAGATTTTGGTCTAGCTAAAATATGTGGAGGTGATCAAATAGAAGGCGAAACAAGGCGAATAGTTGGTACATATGGTTATATGGCACCAGAATATGCTACTGACGGATTATTCTCAATTAAATCAGATGTATTTAGTTTTGGTGTCTTATTGCTAGAACTTATAAGTGGAAAGAAAAATAGAACACTTAACTACAATCAAAATGATCATAATCTTATTGGACATGCATGGAGATTGTGGAAAGAGGGAGATATGTACTCATTGATTGATGATAGTTTGAAAGACACATGTATTCAAGATGAAGTTTTGCGGTGCATTCAAATTGGACTTTTATGTTTGCAACATCATCCTGACAATAGGCCAAATATGACATCTATTGTTGTGATGTTGAGTAATAATAATATTTTACCTCTACCACATGAACCAGGTTATTTATATAAAAACATACGAGACAAAGGTGAAACTTCTTCCGAGAGACATACATCTTCTTCAATAAATAATGTAACTATCTCACAATTAAATGCAAGATAG 2415 0.3569 MTMLAISVLLLLLFKNTSAADTITQSDSLSDGSTLISKDETFELGFFTPGNSPNRYVGIWYKNIQVKTVVWVANRDNPIKDNSSKLIINKQGNLVLLNSNQSLIWSTNTTKKASTPIVQLLENGNLVIRDEKDTESFLWQSFDYPTDTLLPEMKLGWDKRTGLNRVQTAWKNWEDPSLGDFTSSMSLSNNPEVVLLKGNSTEFYRTGPMIGAESSGVYGMQANPIFNPEVVNNEDEAYFLFTLKNKSVISIVVLNQTSMILQRLVWIPQSRKWSNYLNLPHDTCDTYNVCGPYGYCVIDASPICQCLDGFKPKSPQQWNTMDWADGCVHTGNWSCGVKGRDGFLKVTGVKLPDTTNTWVDANITLDDCKLKCLQNCSCTAYSSLTSNEDSGGCSIWFKDLKDLRDSDSKRNLYVRIDGSNIGDKHDYTKMAILVVSIIVFAFTVMLLTLCIYRKKIKNKEDNNEGEDYDLDLPCFDLATIFEATNNFTNANKLGEGGFGPVYKGKLQDGQEIAVKRLSRSSGQGLNEFKNEVILCSKLQHRNLIKIIGYCVESDEKMLIYEYMSNTSLDSFIFDPIQSKVLDWPMRFNILYGIARGLLYLHQDSRFRIIHRDLKASNILLDRDMNPKISDFGLAKICGGDQIEGETRRIVGTYGYMAPEYATDGLFSIKSDVFSFGVLLLELISGKKNRTLNYNQNDHNLIGHAWRLWKEGDMYSLIDDSLKDTCIQDEVLRCIQIGLLCLQHHPDNRPNMTSIVVMLSNNNILPLPHEPGYLYKNIRDKGETSSERHTSSSINNVTISQLNAR 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00517 804 CDD STKc_IRAK 493 758 - -
Vivi7g00517 804 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 6 749 - -
Vivi7g00517 804 CDD B_lectin 26 145 IPR001480 -
Vivi7g00517 804 PIRSF SRK 1 804 IPR024171 GO:0004674
Vivi7g00517 804 Pfam Protein tyrosine and serine/threonine kinase 490 757 IPR001245 GO:0004672|GO:0006468
Vivi7g00517 804 SMART serkin_6 487 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00517 804 MobiDBLite consensus disorder prediction 787 804 - -
Vivi7g00517 804 Gene3D Phosphorylase Kinase; domain 1 449 562 - -
Vivi7g00517 804 SMART blect_4 26 145 IPR001480 -
Vivi7g00517 804 ProSiteProfiles EGF-like domain profile. 280 316 IPR000742 -
Vivi7g00517 804 MobiDBLite consensus disorder prediction 780 804 - -
Vivi7g00517 804 Gene3D Transferase(Phosphotransferase) domain 1 563 764 - -
Vivi7g00517 804 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 176 IPR036426 -
Vivi7g00517 804 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 563 765 - -
Vivi7g00517 804 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 16 142 - -
Vivi7g00517 804 Pfam D-mannose binding lectin 68 171 IPR001480 -
Vivi7g00517 804 Gene3D - 15 142 IPR036426 -
Vivi7g00517 804 Pfam PAN-like domain 335 402 IPR003609 -
Vivi7g00517 804 SUPERFAMILY Protein kinase-like (PK-like) 468 787 IPR011009 -
Vivi7g00517 804 Pfam S-locus glycoprotein domain 204 314 IPR000858 GO:0048544
Vivi7g00517 804 SMART ntp_6 338 416 IPR003609 -
Vivi7g00517 804 ProSiteProfiles Protein kinase domain profile. 487 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00517 804 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 452 562 - -
Vivi7g00517 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 608 620 IPR008271 GO:0004672|GO:0006468
Vivi7g00517 804 Gene3D Hepatocyte Growth Factor 334 414 - -
Vivi7g00517 804 ProSiteProfiles Bulb-type lectin domain profile. 20 141 IPR001480 -
Vivi7g00517 804 CDD PAN_AP_plant 334 416 - -
Vivi7g00517 804 ProSiteProfiles PAN/Apple domain profile. 335 417 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00517 Vivi-Chr7 30970411 30974037 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00517 432 772 Receptor kinase-like Gene Family AT4G23230 53.602 4.55e-127 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi7g00517 PK_Tyr_Ser-Thr 9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00517 - - tpra:123915292 1113.21