Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00512 ATGGGTATTGGTATTCTTTCCTTGGTGTTCATTGTTTTATGCATACTTATACCTTCCCTAAAATTTTCCATAGCAGTAGATACTATTAAAATCTCCGAGTCCATCACTAATGGCATGACCTTGGTTTCACAAGGTGATAAATTTGTACTTGGTTTCTTCAGTCCTATGGATTCCAACAAAAGTTACTTAGGAATTTGGTACAAGAATATCCCAGATAAAACAATTGTTTGGGTTGCAAATGGTGTCAAACCCATCAACGATTCCACCTCCGGGATCCTAACACTAAACAAAACTGGCAGCCTTGTCCTCGAACAAAATGACAAAGTAGTGTGGTATACAACATCTCAACAAGGTTCCCTGAATCCAGTTGCGCAACTTTTGGATTCAGGTAATCTTGTTGTAAGAGACGAGAATGAGACGAACCCAGAAGCCTATCTGTGGCAGAGTTTTGACTACCCTTCTGATACAATACTTCCGAGGATGAAGTTGGGTTGGAATCTTAGAACTCATACAGAGAGGAGAATGACGTCTTGGAAAAGTCCCGATGATCCGTCACCAGGAAACTTATATTGGGGTTCATTACTTTATAATTACCCTGAACAATATCTTATGCATGGAACAAAGAAATTTGTAAGAATTGGACCATGGAATGTAGTGCACTTTAGCGGTTTACCAGATGAAAAGCCTAACAACATTTATGCTTTCAATTTCGTGTCTAATAAGGATGAAATGTATTATACTTATACTCTGGTGAATGATTCTGTAATTATAAGTTTGGTAATAAATCAAACAACGATGACGTCTTATCGTTCCGTGTGGATAGAAGATCAACAAATTTGGAGAGTAGTTAAATCACTACCAAAAGACAGGTGTGACTTGTATGGAATCTGTGGAGCCTATGGTACTTGCATAATCACAGCCTCACAGATATGCAATTGTTTATCAGGGTTTAGCCCTAAGTCTCCAACTGCTTGGAACTCGTCTGACTGGACTCAAGGATGCGTCCGAAGTAAACCGTTAAACTGTACTAATAAACTCAAGGATGGATTTTTGAAAGTGGAAGGTGTAAAAGTGCCAGATTGTACACATAGTTGGGTAGATGAAACAATAGGTCTAAATGAATGTAGAGCTAAGTGCTTGAATAATTGTTCTTGTATGGCTTACACTAATTTTAACGTATCAGGAAAAGGTAGTGGTTGTGTCATGTGGTTTGGTGATTTAATTGATCTTAGGACGTTCGAAGATGAAGGGCAGGATCTCTATATTCGAATGGATGCTTCAGAATTAGGCAGAGGTAACCATTGCTCCATTTTATCAGAGCATTCGGAAATTATTGAACTGGAAGGTGGAAGAGGTAGTGAAGATGAAGGTGATATCGATCTCCCACTGCTTGCATATTCAACTTTAGTCACTGCCACTGATAACTTCTCCATTAAGAACAAGATTGGAGAAGGTGGTTTTGGACCTGTATACAAGGGAAGATTGGCATGTGGGCGAGAAATTGCTGCGAAGCGGCTTTCAAGTGACTCTGGACAAGGAATTACTGAGTTAAAGAATGAAGTAAAACTTATTGCAAAACTTCAACACCGAAATCTTGTTAAACTTCTTGGTTGTTGCATCGAGGAAGAAAATAGAGTGCTAGTTTATGAATTCATGAATAACCGTAGCTTGAATATGTTGATTTTTGATGATACTAAAAGGAAACTTCTAGATTGGCCGAAGCGCTTCAACATTATTTGCGGAATCGCTCGAGGTCTTCTTTACCTTCATCAAGATTCTAGATTGAGGATAATTCATAGAGACCTCAAACCAAGCAATATTTTGCTAGATGACATGCTGAACCCAAAAATTTCAGATTTTGGTATAGCTAGAATATTTGGATTAGATCAAACACACGGAAATACAATGCGGGTGGTTGGAACTTATGGCTACATGGCACCAGAATATGCCGCAGATGGACTTTTTTCTGTGAAGTCAGATGTGTTTAGTTATGGAATTTTGATGCTGGAGATTATATGCGGAAAGAGAAGTAGAGGTTTTTATATCGACGACGAATCTCCAAACCTTGCCACTCATGCATGGAGTTTATGGAAAGAGGGAAGAGCTATAGAACTAATTGACAAAGGCATAGAGGACTCTTGTGTTGAATCAGAGGCATTGCGTTGCATTCATGTGAGTCTCTTGTGTATCCAACAATTTCCAAAGGATAGGCCTAATATGCCTTCGGTGGTTTTAATGTTGGGGAGTGATGGTGAATTTTCTAAGCCAAAAGAACCTGGTTACTATATAAAGAAAGATTCATTTGTAGAAACTTCCAACTTGGGTCAAAGCGAAAAAATCACAACCAATGATATGACCATCACCTTATTAGAAGCCCGATGA 2382 0.3871 MGIGILSLVFIVLCILIPSLKFSIAVDTIKISESITNGMTLVSQGDKFVLGFFSPMDSNKSYLGIWYKNIPDKTIVWVANGVKPINDSTSGILTLNKTGSLVLEQNDKVVWYTTSQQGSLNPVAQLLDSGNLVVRDENETNPEAYLWQSFDYPSDTILPRMKLGWNLRTHTERRMTSWKSPDDPSPGNLYWGSLLYNYPEQYLMHGTKKFVRIGPWNVVHFSGLPDEKPNNIYAFNFVSNKDEMYYTYTLVNDSVIISLVINQTTMTSYRSVWIEDQQIWRVVKSLPKDRCDLYGICGAYGTCIITASQICNCLSGFSPKSPTAWNSSDWTQGCVRSKPLNCTNKLKDGFLKVEGVKVPDCTHSWVDETIGLNECRAKCLNNCSCMAYTNFNVSGKGSGCVMWFGDLIDLRTFEDEGQDLYIRMDASELGRGNHCSILSEHSEIIELEGGRGSEDEGDIDLPLLAYSTLVTATDNFSIKNKIGEGGFGPVYKGRLACGREIAAKRLSSDSGQGITELKNEVKLIAKLQHRNLVKLLGCCIEEENRVLVYEFMNNRSLNMLIFDDTKRKLLDWPKRFNIICGIARGLLYLHQDSRLRIIHRDLKPSNILLDDMLNPKISDFGIARIFGLDQTHGNTMRVVGTYGYMAPEYAADGLFSVKSDVFSYGILMLEIICGKRSRGFYIDDESPNLATHAWSLWKEGRAIELIDKGIEDSCVESEALRCIHVSLLCIQQFPKDRPNMPSVVLMLGSDGEFSKPKEPGYYIKKDSFVETSNLGQSEKITTNDMTITLLEAR 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00512 793 SMART ntp_6 345 424 IPR003609 -
Vivi7g00512 793 ProSiteProfiles PAN/Apple domain profile. 342 425 IPR003609 -
Vivi7g00512 793 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 150 - -
Vivi7g00512 793 ProSiteProfiles Protein kinase domain profile. 476 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00512 793 CDD PAN_AP_plant 339 423 - -
Vivi7g00512 793 Pfam S-locus glycoprotein domain 212 321 IPR000858 GO:0048544
Vivi7g00512 793 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 738 - -
Vivi7g00512 793 Pfam Domain of unknown function (DUF3403) 754 793 IPR021820 GO:0004674
Vivi7g00512 793 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 184 IPR036426 -
Vivi7g00512 793 ProSiteProfiles EGF-like domain profile. 287 323 IPR000742 -
Vivi7g00512 793 Pfam D-mannose binding lectin 74 179 IPR001480 -
Vivi7g00512 793 SMART serkin_6 476 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00512 793 CDD STKc_IRAK 482 747 - -
Vivi7g00512 793 Gene3D Transferase(Phosphotransferase) domain 1 552 758 - -
Vivi7g00512 793 PIRSF SRK 433 793 IPR024171 GO:0004674
Vivi7g00512 793 PIRSF SRK 2 450 IPR024171 GO:0004674
Vivi7g00512 793 SMART blect_4 32 153 IPR001480 -
Vivi7g00512 793 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 552 755 - -
Vivi7g00512 793 ProSitePatterns Serine/Threonine protein kinases active-site signature. 597 609 IPR008271 GO:0004672|GO:0006468
Vivi7g00512 793 Gene3D Hepatocyte Growth Factor 341 422 - -
Vivi7g00512 793 Pfam PAN-like domain 342 410 IPR003609 -
Vivi7g00512 793 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
Vivi7g00512 793 Gene3D - 22 150 IPR036426 -
Vivi7g00512 793 CDD B_lectin 32 153 IPR001480 -
Vivi7g00512 793 Gene3D Phosphorylase Kinase; domain 1 453 551 - -
Vivi7g00512 793 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 442 551 - -
Vivi7g00512 793 Pfam Protein kinase domain 477 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00512 793 SUPERFAMILY Protein kinase-like (PK-like) 461 747 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00512 Vivi-Chr7 30642811 30646256 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00512 464 793 Receptor kinase-like Gene Family AT4G11530 54.006 2.50e-121 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi7g00512 Pkinase 3.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00512 - - gmx:100775648 1176.77