Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00508 ATGAATCACACCAAAATGACCATTTTCCCAGCAATGGTAATTGTTTCTATGTTACTATTACTCTTCTCCAAATTTTCCTATGGAGCAGATACTATTACCCAATCAGAGTCACTTTCCGATGGAAGCACCTTGATTTCCAAAGAAGGAACCTTCGAGTTGGGTTTCTTTAATCCCGGTAATTCCCCGAACCGCTATGTCGGAATTTGGTACAAAAACATCCCGGTCAAAACCGTTGTTTGGGTTGCAAATCGTGATAATCCTATCAAAGACAACTCAAGCAAGTTGATGATAGACAAACAAGGAAATCTCGTTCTTCTCAACAGCAATCAGTCTCTTATATGGTCAACAAACACAACGAAGAAGGCTTCAACTCCAATTGTCCAGCTTCTGGACAACGGAAATTTAGTGATTAGAGATGAGAACGACACTGAAACTGATGAAGAAAGTTTCTTATGGCAGAGCTTTGACTATCCTACCGATACATTATTACCTGAGATGAAGCTTGGATGGGACAAGAAAACTGGTATTCATAGAATATTTACTGCATGGAAAAATTGGGAAGATCCATCTTCAGGTGATTTTGTATCATCCATGAGTCTTAGTGATAATCCTGAAGATGTTCTTTGGAAAGGTTCAACTGAGTTCTACAGAACAGGACCTATGATTGGTACTACGGATAGTGGAGCATATGGGATGAAGGCTAACCCAATTTTTAATTCAGAGGTTGTAAGCAATGAAGATGAAGCGTATTTTTCGTACACCCTAAAGAACAAATCTGTGATTTCCATAGTTGTTTTAAACCAAACTAGTTTGCTTCTTCAACGCCTTGTATGGATTCCTCAATCTAGAAAATGGAGTAACTACTTGAACCTACCACATGATACTTGTGATGGTTATAATGTTTGTGGACCATATGGAAAGTGTGTGATTGACTCATCCCCACTTTGTCAGTGTTTGGATGGGTTTAAGCCAAAATCACCGCAACAGTGGAGCACAATGAACTGGGCAGATGGATGTGTGCGCAATGGAAATTGGAGCTGTGGAGTGAAGGGAAGAGACGGTTTTTTTAAAGTTACTGGAGTGAAGTTTCCAGATACTACAAATACATGGGCTAGCGCAAATATGACACTTGATGATTGCAAGCTCAAATGTTTGCAAAATTGTTCCTGCACAGCTTACTCAGGCTTAACCTCAAATGAAGATAGTGGCGGTTGTTCCATGTGGTTTAATGATCTTAAAGACTTAAGAGATTCAGATTCTATGAGAAACTTATATGTTCGAATTGATGCATCAAATATAGGTGCTAAACATGGGTATCCTAAATTGGCTATCTTGGTAGTTTCGATCATTGTTTTTGCAGTCATTGTGATGCTATTGACTCTATACATTTATAGAAAAAAGATAAAATACAAAGAAGACAATAATGAAGACGACCGTAATGATTTAGACCTCCCTTTCTTCGATCTTGCTACAATACATAAGGCCACTGATTACTTCGCAGATGATAACAAATTGGGTGAAGGTGGTTTTGGACCCGTATATAAGGGTAAGTTGCAAGATGGTCAAGAAATTGCAGTCAAAAGGCTTTCAAGAAGTTCTGGACAAGGATTGAAAGAATTTAAGAACGAAGTTATTTTATGTTCTAAACTTCAACATCGAAACCTTGTTAAAATAATTGGCTATTGCATTGAAAAAGATGAAAAAATGTTGGTCTATGAATACATGCCGAACACAAGCCTTGATTCATTTATTTTTGATCCAATTCAAAGTAAATTATTAGATTGGTCTATGCGATTTAACATCTTGTTTGGAATTGCCCGAGGTCTTCTTTACTTGCATCAAGATTCAAGGTTAAGAATTGTACACAGAGATTTAAAAGCGAGCAATATTTTATTAGACAATGATATGCAACCAAAAATTTCTGATTTTGGTCTTGCTAAAATGTGTGGAGATGATCAAATGGAAGGGGAAACAAGTCGAATAGTTGGCACATATGGTTATATGGCACCAGAATATGCCATTGACGGATTATTCTCAATTAAATCAGATGTATTTAGCTTTGGTGTCTTATTGTTAGAACTTATAAGTGGAAAGAAAAACAGAACCCTTAACTATAGTCAAGATGATCACAATCTTATTGGACATGCATGGAGATTATGGAAAGAGGGAACCATACACACATTAATTGATGATAATTTGAAAGATACATGTATTCTTTATGAAGCTTTGCGGTGTATCCAAATAGGGCTTTTATGTCTGCAACATCATCCTGATAATAGGCCAAGTATGACATCTGTTGTTGTGATGTTGAATGGTAATAATATTTTACCTCTACCACATGAGCCAAGTTATTTATTGAAAACCATAACAAGTGAAGGAGAAACTTCTTCCGAAAGACAAAGATCTTCTTCAATAAACAATGTAACTATCTCACAATTAAATGCAAGATAG 2451 0.3656 MNHTKMTIFPAMVIVSMLLLLFSKFSYGADTITQSESLSDGSTLISKEGTFELGFFNPGNSPNRYVGIWYKNIPVKTVVWVANRDNPIKDNSSKLMIDKQGNLVLLNSNQSLIWSTNTTKKASTPIVQLLDNGNLVIRDENDTETDEESFLWQSFDYPTDTLLPEMKLGWDKKTGIHRIFTAWKNWEDPSSGDFVSSMSLSDNPEDVLWKGSTEFYRTGPMIGTTDSGAYGMKANPIFNSEVVSNEDEAYFSYTLKNKSVISIVVLNQTSLLLQRLVWIPQSRKWSNYLNLPHDTCDGYNVCGPYGKCVIDSSPLCQCLDGFKPKSPQQWSTMNWADGCVRNGNWSCGVKGRDGFFKVTGVKFPDTTNTWASANMTLDDCKLKCLQNCSCTAYSGLTSNEDSGGCSMWFNDLKDLRDSDSMRNLYVRIDASNIGAKHGYPKLAILVVSIIVFAVIVMLLTLYIYRKKIKYKEDNNEDDRNDLDLPFFDLATIHKATDYFADDNKLGEGGFGPVYKGKLQDGQEIAVKRLSRSSGQGLKEFKNEVILCSKLQHRNLVKIIGYCIEKDEKMLVYEYMPNTSLDSFIFDPIQSKLLDWSMRFNILFGIARGLLYLHQDSRLRIVHRDLKASNILLDNDMQPKISDFGLAKMCGDDQMEGETSRIVGTYGYMAPEYAIDGLFSIKSDVFSFGVLLLELISGKKNRTLNYSQDDHNLIGHAWRLWKEGTIHTLIDDNLKDTCILYEALRCIQIGLLCLQHHPDNRPSMTSVVVMLNGNNILPLPHEPSYLLKTITSEGETSSERQRSSSINNVTISQLNAR 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00508 816 SUPERFAMILY Protein kinase-like (PK-like) 483 802 IPR011009 -
Vivi7g00508 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 575 777 - -
Vivi7g00508 816 SMART blect_4 35 158 IPR001480 -
Vivi7g00508 816 Gene3D Transferase(Phosphotransferase) domain 1 575 775 - -
Vivi7g00508 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 464 574 - -
Vivi7g00508 816 SMART ntp_6 350 428 IPR003609 -
Vivi7g00508 816 Pfam PAN-like domain 347 414 IPR003609 -
Vivi7g00508 816 Gene3D - 25 155 IPR036426 -
Vivi7g00508 816 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 761 - -
Vivi7g00508 816 MobiDBLite consensus disorder prediction 792 816 - -
Vivi7g00508 816 CDD B_lectin 35 158 IPR001480 -
Vivi7g00508 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Vivi7g00508 816 ProSiteProfiles PAN/Apple domain profile. 347 429 IPR003609 -
Vivi7g00508 816 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 155 - -
Vivi7g00508 816 CDD STKc_IRAK 505 772 - -
Vivi7g00508 816 PIRSF SRK 2 816 IPR024171 GO:0004674
Vivi7g00508 816 ProSiteProfiles Bulb-type lectin domain profile. 29 150 IPR001480 -
Vivi7g00508 816 Gene3D Phosphorylase Kinase; domain 1 472 574 - -
Vivi7g00508 816 CDD EGF_CA 294 326 - -
Vivi7g00508 816 CDD PAN_AP_plant 346 428 - -
Vivi7g00508 816 Pfam Protein tyrosine and serine/threonine kinase 502 769 IPR001245 GO:0004672|GO:0006468
Vivi7g00508 816 Pfam D-mannose binding lectin 77 184 IPR001480 -
Vivi7g00508 816 ProSiteProfiles Protein kinase domain profile. 499 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00508 816 ProSiteProfiles EGF-like domain profile. 292 328 IPR000742 -
Vivi7g00508 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 189 IPR036426 -
Vivi7g00508 816 Pfam S-locus glycoprotein domain 216 326 IPR000858 GO:0048544
Vivi7g00508 816 SMART serkin_6 499 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00508 816 Gene3D Hepatocyte Growth Factor 346 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00508 Vivi-Chr7 30342080 30345600 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00508 444 788 Receptor kinase-like Gene Family AT4G23230 53.125 2.42e-126 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi7g00508 PK_Tyr_Ser-Thr 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00508 - - tpra:123915292 1135.17