Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00506 ATGAAACATGCTAAAATGACCATTTTCACGGCCAAGCTAGTTATATCTATGTTACTATTACTCTTCTCAGAAATTTCCTATGGAGGCGATACTATTACTCCATCATACTCACTTTCCGATGGAAACACATTGATTTCTAAAGATGGAACCTTCGAGTTGGGTTTCTTTACTCCTGGTAATTCTCGGAACCGCTATGTTGGAATTTGGTACAAAAACATCCCTGTTAAAACAGTTGTTTGGGTTGCAAATCGTGATAATCCTATCAAAGACAACAACTCAAGCAAGTTGATGATAAACAAACAAGGAAATCTGGTGCTTCTAAACAACAATCAGTCTCTTTTATGGTCAACAAACACAACAAAGAAGACTTTAACTCCAGTTGTCCAGCTTCTGGACAACGGAAATTTAGTGATTCGAGATGAGAAGGACACTAAAACTGATGAAGACGGTTTTGTATGGCAGAGCTTTGATTATCCTACTGATACGATGTTGCCAGGAATGAAGTTTGGATGGAGCAAGAAAACCGGTATCAATCGGCGCCTCACTGCATGGAAAAGCTGGGAAGATCCATCTTCAGGTGATTTTACTTCTTCATTTGTTAGACTTGACACAAATCCTGAAATAATGTTTTGGAAAGGTTCGGTTGAAATCTACAGAATAGGAGCAATGATCGGTGTTATGTCGAGTGGTCTTATGTCTATGGGAGTATCTGGGTTAAGGACTAACCCGCTTTTTAATTACGATTTTGTAAGCAATCAAGAACAAGTTTATTATAGGTACACGCTTAAGAACAGTTCTGTGATTTCGATAATTGTTTTGAACCAAACGCTTTCGGTTCGGCAACGTCTCATATGGATTGCTGAATCTAAAACATGGAATCTTTATCAGAACCTGCCACAAGATAGGTGTGATGCTTATAATGTTTGTGGGGCCAATGGAGTCTGTGTCATTGGTGGATCGCCGATTTGTCAGTGTTTAGAAGGATTTAAGCCGAAATCGCCTCAACGGTGGGATGCAATGGACTGGACACAGGGTTGTGTAAGAAGTAGAAATTGGACTTGTGGAGTCGAGAATAGAGGCGGATTTCGAAGAGTTGTGGGAATGAAGTTGCCGGATACTACAAATTATTGGATTGATGAAAATATGACACTTGATGAATGCAAGATCAAGTGTTTGCAGAATTGTTCATGCACAGCTTACTCAGGCTTGGGTGAAAAGAATGGAAACATTGGTTGTTCAATTTGGTTTGATGATCTTAAAGATTTGAGAGTTACAGACGCTGACTTGGCCTTATATGTTCGAACTGATGTTTTAGACATAGATGATAGACATGGGCGTACTAAAAAGGTTATCTATGCAGTTTCAGCAATTGTTTCGGTAGCTATTGTGACATTGTTGGCATTTTTCATATATAGAACAAAGATAAAGTATAAAGTTAACATCGAGTGGAAGGAAGACAATAGTGATTGTGAACATGATGATTTGGAAATTCCTTTCTTTGATCTTGGTACAATCCTATATGCCACAAATAACTTCTCAATTGAAAACAAATTAGGCGAAGGTGGTTTTGGACCAGTATACAAGGGAAAATTTGTTGATGGTCAAGAAGTTGCAGTCAAACGACTTTCTTGGAGTTCTGGACAAGGAATGAAAGAATTTAAAAATGAAGTTATATTATGTGCTAAACTTCAACATCGAAATCTTGTCAAAGTTGTCGGTTGTTGCATTGAAAAAGAAGAGAAAATGCTAGTCTACGAATACATGTCAAACACAAGCCTTGATTCATTCATTTTTGATTCAACTCAAAGTAAATCATTAAATTGGCCTTTGCGTTTAAATATCTTAAATGGAATTGCACGAGGTCTTCTTTATTTACATCAAGATTCAAGATTAAGAATCATACACAGAGATTTGAAGGCAAGTAACATTTTATTAGACAAAGACATGAATCCAAAAATTTCGGATTTTGGTTTGGCTAAAATATGTGGAGGTGATCAAATTGAAGGAAAAACAAATCGAATAATTGGTACATACGGTTATATGGCACCTGAATATGCCATTGACGGGTTATTCTCAGTTAAATCAGATGTATTTAGTTTTGGCGTATTATTGCTAGAACTTATAAGTGGAATGAAAAATAGAACACATACCTTCCATCAACATGATCACAATCTTATTGGACATGCGTGGAGATTGTGGAAAGAGGGAACTATACACACAATGATTGATGAAAATTTGAAAGACACGTGCATTCTCTATGAAGCTTTGAGGTGCGTTCAAATAGGTCTTTTATGTATACAACATCATCCAAATGATCGACCAGACATGACATCTGTGCTTGTGATGTTGAAAAGTAGTAATACCTTACCTCAACCACAAGAACCATGTTATTTATATAAAATAAAATCATTAGAAAGGGAACTTTTTTCTTATGAAAGAGAATCATCATCTTCAATAAATCAAGTAACTATCTCATTATTGGATGCTAGGTAG 2493 0.3646 MKHAKMTIFTAKLVISMLLLLFSEISYGGDTITPSYSLSDGNTLISKDGTFELGFFTPGNSRNRYVGIWYKNIPVKTVVWVANRDNPIKDNNSSKLMINKQGNLVLLNNNQSLLWSTNTTKKTLTPVVQLLDNGNLVIRDEKDTKTDEDGFVWQSFDYPTDTMLPGMKFGWSKKTGINRRLTAWKSWEDPSSGDFTSSFVRLDTNPEIMFWKGSVEIYRIGAMIGVMSSGLMSMGVSGLRTNPLFNYDFVSNQEQVYYRYTLKNSSVISIIVLNQTLSVRQRLIWIAESKTWNLYQNLPQDRCDAYNVCGANGVCVIGGSPICQCLEGFKPKSPQRWDAMDWTQGCVRSRNWTCGVENRGGFRRVVGMKLPDTTNYWIDENMTLDECKIKCLQNCSCTAYSGLGEKNGNIGCSIWFDDLKDLRVTDADLALYVRTDVLDIDDRHGRTKKVIYAVSAIVSVAIVTLLAFFIYRTKIKYKVNIEWKEDNSDCEHDDLEIPFFDLGTILYATNNFSIENKLGEGGFGPVYKGKFVDGQEVAVKRLSWSSGQGMKEFKNEVILCAKLQHRNLVKVVGCCIEKEEKMLVYEYMSNTSLDSFIFDSTQSKSLNWPLRLNILNGIARGLLYLHQDSRLRIIHRDLKASNILLDKDMNPKISDFGLAKICGGDQIEGKTNRIIGTYGYMAPEYAIDGLFSVKSDVFSFGVLLLELISGMKNRTHTFHQHDHNLIGHAWRLWKEGTIHTMIDENLKDTCILYEALRCVQIGLLCIQHHPNDRPDMTSVLVMLKSSNTLPQPQEPCYLYKIKSLERELFSYERESSSSINQVTISLLDAR 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00506 830 Pfam S-locus glycoprotein domain 234 333 IPR000858 GO:0048544
Vivi7g00506 830 CDD PAN_AP_plant 361 435 - -
Vivi7g00506 830 SMART ntp_6 357 435 IPR003609 -
Vivi7g00506 830 ProSiteProfiles PAN/Apple domain profile. 354 436 IPR003609 -
Vivi7g00506 830 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 476 587 - -
Vivi7g00506 830 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 588 791 - -
Vivi7g00506 830 ProSiteProfiles Protein kinase domain profile. 512 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00506 830 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 773 - -
Vivi7g00506 830 Pfam PAN-like domain 356 421 IPR003609 -
Vivi7g00506 830 PIRSF SRK 2 830 IPR024171 GO:0004674
Vivi7g00506 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Vivi7g00506 830 CDD STKc_IRAK 518 784 - -
Vivi7g00506 830 Pfam D-mannose binding lectin 77 185 IPR001480 -
Vivi7g00506 830 Gene3D Transferase(Phosphotransferase) domain 1 588 795 - -
Vivi7g00506 830 SMART serkin_6 512 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00506 830 CDD B_lectin 35 159 IPR001480 -
Vivi7g00506 830 SUPERFAMILY Protein kinase-like (PK-like) 496 804 IPR011009 -
Vivi7g00506 830 Pfam Protein tyrosine and serine/threonine kinase 513 780 IPR001245 GO:0004672|GO:0006468
Vivi7g00506 830 Gene3D Phosphorylase Kinase; domain 1 473 587 - -
Vivi7g00506 830 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 190 IPR036426 -
Vivi7g00506 830 ProSiteProfiles EGF-like domain profile. 299 335 IPR000742 -
Vivi7g00506 830 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 156 - -
Vivi7g00506 830 CDD EGF_CA 301 333 - -
Vivi7g00506 830 Gene3D - 24 156 IPR036426 -
Vivi7g00506 830 ProSiteProfiles Bulb-type lectin domain profile. 29 151 IPR001480 -
Vivi7g00506 830 SMART blect_4 35 159 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00506 Vivi-Chr7 30293176 30297265 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00506 450 797 Receptor kinase-like Gene Family AT4G23230 52.991 2.47e-119 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi7g00506 PK_Tyr_Ser-Thr 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00506 - - gmx:100790436 1104.74