Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00504 ATGAAAAAAGCTAAAATGAACATTTTTCTGGCCATGCTAGTTATATCTGTGTTAGTATTATTCTTCTTCAAAAATACCTCTGCAGCAGATACTATTACTCAATCAGATTCACTTTTCGATGGAAGCACCTTGATTTCTAAAGATGAAACCTTCGAGTTGGGTTTCTTTACTCCCGGTAATTCTCCGAATCGCTATATTGGAATTTGGTACAAAAACATCCCTGTTAAAACCGTTGTTTGGGTTGCCAATCGTGATAACCCTGTCAAAGACAACGCAAGCAAGTTGATCATAAACAAACAAGGAAATCTGGTTCTACTTAACCGCAATCAGTCTCTTCTATGGTCAACAAACACAACAAAGAAGACTTCAGCTCCTATTGTCCAGCTTCTGGACAACGGAAATTTAGTGGTTAGAGATGAGAAGGACACTGAAACTGATGAAGACAGTTTCTTATGGCAGAGCTTTGATTATCCTACTGATACGATGTTGCCAGGAATGAAGTTTGGATGGAACAAGAAAACCGGTATTAATCGGCGTCTCACTGCATGGAAAAACTGGGACGATCCATCTTCAGGTGATTTTACTTCTTCGTTTGTCAGACTTGACAAAAATCCTGAAATACTGTTTTGGAAAGGCTCAACCGTGTTCTTCAGAACAGGACCGATGATCGGCGTTATGTCGAGTGGTCTTATGTCTATGGGAATATTTGGGTTAAGGACTAACCCACTTTTTAACTACGATTTTGTAAGCAATCAAGAACAAGTTTATTATATGTACACCCTTAAGAACAGTTCTGTGATTTCCATAATTGTTTTGAATCAAACGCTTTTGGCTCGTCAACGACTCACTTGGATTCCTGAATCCAAAAGATGGAATCTTTATCAGAACCTTCCACAAGATAGGTGTGATGCTTATAATGTTTGTGGTGCCAATGGAGTTTGTGTCATTGGTGGATCGCCGATTTGTCAGTGTTTAGATGGGTTCAAGCCGAGATCACCTCAACGGTGGGATGCAATGGATTGGACACAGGGTTGTGTAAGAAGTGGAAATTGGACATGTGGAGTTGGGAATAGAGGCGGATTTCGGAGACTTGTTGGAATGAAGTTGCCGGATACTACAAATTATTGGATTGATGAAAATATGACACTCGATAAATGCAAGATCAAATGTTTGGAAAATTGTTCATGCACAGCTTACTCAGGCTTAGGTGAAAATAATGGAGACATTGGTTGTTCCATTTGGTTTGATGATCTTAAAGATTTGAGAGTTACAGAATCTAACTTAGACTTATATGTTAGGACTGATGTTTCAGATATCGATGATAAACACGGGCGTACCAAAAAGATTATCTTTGCAGTTTCAGCCATTGTTTCAGCAGTTATTGTGACACTGTTGGCATTCTTCGTCTATAGAACAAAGATGAAGTATAAAGTAAACATTGAGTGGAAGGAAGACGACAGTGATTGTGAACATGAAGATTTAGAGATTCCTTTCTTTGATCTTGCTACAATCCTAAATGCCACAAATAATTTCTCAATTGACAACAAACTCGGCGAAGGGGGTTTTGGACCAGTATATAAGGGAAAATTGGTTGATGGCCAAGAAGTTGCAGTTAAACGACTGTCTATGAGTTCTGGACAAGGAATAAAAGAATTTAAAAATGAAGTTAAATTATGTGCTAAACTTCAACATCGAAATCTTGTCAAAGTTGTTGGTTGTTGCATTGAAAAAGATGAGAAAATGCTAGTCTATGAATACATGTCAAACACAAGCCTTGATTCATTCATTTTTGATCCAACTCAAAGTAAATCATTAAATTGGCCTTTGCGTTTTAACATCTTATATGGAATTGCACGAGGTCTTCTTTATTTACATCAAGATTCAAGATTAAGAATCATACATAGAGATTTGAAGGCAAGTAATATTTTACTAGACAAAGACATGAATCCAAAAATTTCAGATTTTGGTTTGGCTAAAATGTGTGGAGGTGACCAAATTGAAGGAAAAACAAATCGAATAATTGGTACATACGGTTATATGGCTCCTGAATATGCCATTGACGGGTTATTCTCTGTTAAATCAGATGTATTTAGTTTTGGTGTATTATTATTAGAACTTATAAGTGGAATGAAAAATAGAACGCATACCTTCCATCAAAGTGATCACAATCTTATTGGACATGCATGGAGATTGTGGAAAGAGGGAACTATACACACAATGATTGATGAAAATTTGAAGGACACATGTATTATATATGAAGCTTTGCGGTGCATTCAAATAGGTCTTTTATGTATACAACATCATCCAAATGATCGACCAGATATGACATCTGTGCTTCTGATGTTGAAAAGTAGCAATACTTTACCTCAACCAGAAGAGCCAAGTTACTTATTTAAAATAAAATCATTAGAAAGAGAACTTTTTTCTTATAAAAGAGTATCATCATCTTCAATAAATCAAGTAACTATCTCATTATTAGATGCTAGGTAG 2490 0.3631 MKKAKMNIFLAMLVISVLVLFFFKNTSAADTITQSDSLFDGSTLISKDETFELGFFTPGNSPNRYIGIWYKNIPVKTVVWVANRDNPVKDNASKLIINKQGNLVLLNRNQSLLWSTNTTKKTSAPIVQLLDNGNLVVRDEKDTETDEDSFLWQSFDYPTDTMLPGMKFGWNKKTGINRRLTAWKNWDDPSSGDFTSSFVRLDKNPEILFWKGSTVFFRTGPMIGVMSSGLMSMGIFGLRTNPLFNYDFVSNQEQVYYMYTLKNSSVISIIVLNQTLLARQRLTWIPESKRWNLYQNLPQDRCDAYNVCGANGVCVIGGSPICQCLDGFKPRSPQRWDAMDWTQGCVRSGNWTCGVGNRGGFRRLVGMKLPDTTNYWIDENMTLDKCKIKCLENCSCTAYSGLGENNGDIGCSIWFDDLKDLRVTESNLDLYVRTDVSDIDDKHGRTKKIIFAVSAIVSAVIVTLLAFFVYRTKMKYKVNIEWKEDDSDCEHEDLEIPFFDLATILNATNNFSIDNKLGEGGFGPVYKGKLVDGQEVAVKRLSMSSGQGIKEFKNEVKLCAKLQHRNLVKVVGCCIEKDEKMLVYEYMSNTSLDSFIFDPTQSKSLNWPLRFNILYGIARGLLYLHQDSRLRIIHRDLKASNILLDKDMNPKISDFGLAKMCGGDQIEGKTNRIIGTYGYMAPEYAIDGLFSVKSDVFSFGVLLLELISGMKNRTHTFHQSDHNLIGHAWRLWKEGTIHTMIDENLKDTCIIYEALRCIQIGLLCIQHHPNDRPDMTSVLLMLKSSNTLPQPEEPSYLFKIKSLERELFSYKRVSSSSINQVTISLLDAR 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00504 829 CDD STKc_IRAK 517 783 - -
Vivi7g00504 829 Pfam S-locus glycoprotein domain 217 331 IPR000858 GO:0048544
Vivi7g00504 829 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 475 586 - -
Vivi7g00504 829 ProSiteProfiles Protein kinase domain profile. 511 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00504 829 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 25 155 - -
Vivi7g00504 829 ProSiteProfiles Bulb-type lectin domain profile. 29 150 IPR001480 -
Vivi7g00504 829 ProSiteProfiles PAN/Apple domain profile. 353 435 IPR003609 -
Vivi7g00504 829 Pfam D-mannose binding lectin 77 184 IPR001480 -
Vivi7g00504 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Vivi7g00504 829 Pfam PAN-like domain 357 420 IPR003609 -
Vivi7g00504 829 SMART blect_4 35 158 IPR001480 -
Vivi7g00504 829 Gene3D Transferase(Phosphotransferase) domain 1 587 795 - -
Vivi7g00504 829 SMART ntp_6 356 434 IPR003609 -
Vivi7g00504 829 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 772 - -
Vivi7g00504 829 SMART serkin_6 511 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00504 829 PIRSF SRK 1 829 IPR024171 GO:0004674
Vivi7g00504 829 CDD EGF_CA 300 332 - -
Vivi7g00504 829 Gene3D - 24 155 IPR036426 -
Vivi7g00504 829 ProSiteProfiles EGF-like domain profile. 298 334 IPR000742 -
Vivi7g00504 829 CDD B_lectin 35 158 IPR001480 -
Vivi7g00504 829 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 189 IPR036426 -
Vivi7g00504 829 Pfam Protein tyrosine and serine/threonine kinase 512 779 IPR001245 GO:0004672|GO:0006468
Vivi7g00504 829 CDD PAN_AP_plant 352 434 - -
Vivi7g00504 829 Gene3D Phosphorylase Kinase; domain 1 472 586 - -
Vivi7g00504 829 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 587 790 - -
Vivi7g00504 829 SUPERFAMILY Protein kinase-like (PK-like) 494 798 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00504 Vivi-Chr7 30058984 30063535 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00504 453 796 Receptor kinase-like Gene Family AT4G23230 54.000 9.49e-120 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi7g00504 PK_Tyr_Ser-Thr 1.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00504 - - tpra:123915292 1145.18