Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00462 ATGTCAGGTTCGAAATCCAAATATATGATCCTGTGTTTTTTTCTTGCTTTGAATTTATCTCTTCAAGAGTTTGATTCCAACGCTCAACTCATTCCACAAGATGAAGTGAAATCACTACAAGCAATATCAGATAAACTAAAGAATGTGAATTGGAAAGTAACACAACGTTCTTGCATTGATGGTAGTGGCTTTGGTAATGATAATATAGATGATGATACAGTGAGGAATGTCACATGTGATTGCACTTTCCAAAATAAAACTCTTTGCCATGTTACTAGCATCTTTCTAAAGGGGCAGAATATAGCTGGAGTCATGCCTAGTGAATTTGGAGATCTTACTCAATTGAAAATACTTGATCTTACACGGAACTATCTCAACGGCTCCATTCCGACGAGTTTTGCTAACATATCTCTAGTCGTTTTGTCCCTTTTGGGAAACCGATTAAGTGGTCCGATTCCCGCCGAAATTGGTGATATTGCTAGCTTGGAGGATTTGGTCTTAGAAAATAATCAACTTGGAGGACCACTTCCTTCTAGTCTTGGAAATTTGAGCAACTTGAAGAGACTGCTTCTTTCTTCGAATAATTTTACTGGCACGATTCCAGAATCATTTAGCGAACTAAAGAATCTCACTGATTTTCGGATAGATGGAAGCAGTTTATCTGGACAGATACCTAGTTTTATCGGGAACTGGACCAAGCTTGGGAGATTGGATATGCAGGGAACATCTATGCAAGGTCCAATTCCCCCTACCATATCGGGGTTGAAACTTTTGACTGAGTTGAGAATAAGTGATTTGAATGGACCGACTATGACATTTCCTAATCTGAAGGATTTGAAAAACTTGCAACTACTGGAGCTGAGAAATTGCTTAATCACAGGTCCTATTCCCAATTACATTGGTGAAATGACAAACTTAGTTACTTTAGATCTAAGCTTCAATATGTTTACTGGTTCAATCCCAAATTCAGTTCAGGGATTGAAAAGGCTAAATTACATGTTTATGACTAATAATTCTTTGAGTGGACCGATTCAAGACTGGATACTGGACTTCAAAATTAACATAGATTTATCTTACAACAATTTTACAAAGTCTTCTGCAACTAGCTGCCAGCAGCTAAATCTGAACTTGGCTTCGAGCTATTCGTCTTCAGCAGTCACTTCACCTTCAACATTTTGTTTGAAAAGGAACCTTCCTTGTGCAGGAAAACCTCAATATGATTCATTGTTCATAAACTGTGGAGGACCAGAAGAAGATTTTGATGGAAATCACTATGTAGGTGACCTGCAGGAAAATGGAATTTCGAATTTCGTTCTTAGAAATGCAGGACAATGGGCTTATAGCAGCACAGGAGTGTATATGGGAAATGTTCATGCAGACTATACAGCATCAAATACATATTCTTTGAATATTAATGGCCCGGACTACTATAAAACTGCTCGGCTTTCCCCTCTGTCTCTTAGTTACTATGGCCTTTGTATGAAGAACGGGAATTATAAAGTGAATCTCCACTTTGCCGAGATAATGTTTTCTGATGACCAGACCTTTAAAAGTCTTGGAAGACGCATATTTGATGTTTCAATTCAAGGTTTTAAATATTTGAAAGATTTTAACATTATGGAAGAAGCTGGTGGAGTTGGAAAGGGAATCACTAAGGAATTCGATGTTGAAGTCAATGACAACACGTTGGAAATTCACTTATATTGGGCAGGAAAAGGAACCACTGCCATTCCTGACAGAGGTGTATATGGACCTCTTATATCAGCTATCACAGTAACACCAAACTTTAAAAATCATTCAGAAGGGTTGTCTGCTGGAATTATTATTGGAGTTGTGGCTGCATCATGTGTGCTTGTCATACTCGTAGTGGTTGCCCTTTGGAAGATGGGTTTCCTTTGTGGAAAAGATATAAGAGACAAAGACCTTCTTGACCTTAAAACAGGTTATTTCAGCTTGAGACAAATTAAAGCAGCTACTAATGACTTTGACCCTGCAAATAAGATTGGTGAAGGGGGATTTGGGCCGGTATTCAAGGGTGTGCTGCCAGATGGTGATGTCATTGCTGTTAAGCAGCTCTCCTCCAAATCAAGGCAAGGGAACCGCGAATTTGTTAACGAAATTGGAATGATATCTGCTTTGCAGCATCCAAATCTTGTTAAGCTCTATGGCTGTTGCATTGAAGGAAAGCAGTTGCTACTGATATATGAATACATGGAGAACAACTGTCTCGGCCGTGCACTTTTTGGTCATCAGGAACAGAAGCTGCACTTGGATTGGCCTACAAGAATGAAGATATGTCTTGGTATAGCTAAGGGATTAGCTTATCTTCATGAAGAATCGGCATTGAAAATAGTACATAGAGACATTAAAGCAACAAATGTATTACTTGACAAGGATCTGAATGCCAAGATCTCTGACTTCGGTTTAGCCAAGCTTGATGATGAAGGGAACACCCATATCAGTACACGGGTAGCTGGAACAATCGGATACATGGCTCCAGAATATGCTATGCGGGGTTACTTGACTGATAAAGCAGATGTATATAGCTTTGGAGTTGTAGCTTTAGAGATTGTTAGCGGAAAAAGCAACACAAATTTCAACCCAATGGAGGAGTTTGTATATCTTATGGATTGGGCCTATGATCTCCAAGAGCAAGGACGCCTTATGGAGCTGGTGGATCCAAATCTTGGTTCAAGGTACTCCTCAAAGGAGGCCATGAGAATGCTGAACTTGGCATTGTTATGCACTAACACATCTCCCACTCATAGACCACCCATGTCATTGGTAGTATGCATGCTTGAAGGTAAAACTCCAATCCTAGCGCCCGTAATCAACCGCGGTGAGAGTGGCCGCCATGCAAGACTCAAAGCCTCTGAGTTGCTGGCAGAAGATAGTCAACCTCTTGATTCTTCTACATTTTTACCCGAAAGCATCGATAGAAGACATGGATCATCAAATGGTCCATGGGTTCCCACCTCCATATCTCTTCAAAGTAAAGATGATTTTTCTTCAAGCAGTAAACTTCCTTAG 3030 0.3987 MSGSKSKYMILCFFLALNLSLQEFDSNAQLIPQDEVKSLQAISDKLKNVNWKVTQRSCIDGSGFGNDNIDDDTVRNVTCDCTFQNKTLCHVTSIFLKGQNIAGVMPSEFGDLTQLKILDLTRNYLNGSIPTSFANISLVVLSLLGNRLSGPIPAEIGDIASLEDLVLENNQLGGPLPSSLGNLSNLKRLLLSSNNFTGTIPESFSELKNLTDFRIDGSSLSGQIPSFIGNWTKLGRLDMQGTSMQGPIPPTISGLKLLTELRISDLNGPTMTFPNLKDLKNLQLLELRNCLITGPIPNYIGEMTNLVTLDLSFNMFTGSIPNSVQGLKRLNYMFMTNNSLSGPIQDWILDFKINIDLSYNNFTKSSATSCQQLNLNLASSYSSSAVTSPSTFCLKRNLPCAGKPQYDSLFINCGGPEEDFDGNHYVGDLQENGISNFVLRNAGQWAYSSTGVYMGNVHADYTASNTYSLNINGPDYYKTARLSPLSLSYYGLCMKNGNYKVNLHFAEIMFSDDQTFKSLGRRIFDVSIQGFKYLKDFNIMEEAGGVGKGITKEFDVEVNDNTLEIHLYWAGKGTTAIPDRGVYGPLISAITVTPNFKNHSEGLSAGIIIGVVAASCVLVILVVVALWKMGFLCGKDIRDKDLLDLKTGYFSLRQIKAATNDFDPANKIGEGGFGPVFKGVLPDGDVIAVKQLSSKSRQGNREFVNEIGMISALQHPNLVKLYGCCIEGKQLLLIYEYMENNCLGRALFGHQEQKLHLDWPTRMKICLGIAKGLAYLHEESALKIVHRDIKATNVLLDKDLNAKISDFGLAKLDDEGNTHISTRVAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNFNPMEEFVYLMDWAYDLQEQGRLMELVDPNLGSRYSSKEAMRMLNLALLCTNTSPTHRPPMSLVVCMLEGKTPILAPVINRGESGRHARLKASELLAEDSQPLDSSTFLPESIDRRHGSSNGPWVPTSISLQSKDDFSSSSKLP 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00462 1009 Pfam Malectin domain 409 590 IPR021720 -
Vivi7g00462 1009 FunFam Putative LRR receptor-like serine/threonine-protein kinase 738 945 - -
Vivi7g00462 1009 Pfam Leucine rich repeat 90 148 IPR001611 GO:0005515
Vivi7g00462 1009 Gene3D Transferase(Phosphotransferase) domain 1 738 939 - -
Vivi7g00462 1009 Gene3D Ribonuclease Inhibitor 202 270 IPR032675 -
Vivi7g00462 1009 MobiDBLite consensus disorder prediction 986 1009 - -
Vivi7g00462 1009 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 200 267 - -
Vivi7g00462 1009 SUPERFAMILY Protein kinase-like (PK-like) 647 936 IPR011009 -
Vivi7g00462 1009 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 268 391 - -
Vivi7g00462 1009 Pfam Leucine Rich Repeat 185 207 IPR001611 GO:0005515
Vivi7g00462 1009 Pfam Leucine Rich Repeat 305 327 IPR001611 GO:0005515
Vivi7g00462 1009 SMART serkin_6 662 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00462 1009 SUPERFAMILY L domain-like 74 367 - -
Vivi7g00462 1009 ProSiteProfiles Protein kinase domain profile. 662 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00462 1009 Pfam Protein tyrosine and serine/threonine kinase 666 930 IPR001245 GO:0004672|GO:0006468
Vivi7g00462 1009 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 406 595 - -
Vivi7g00462 1009 MobiDBLite consensus disorder prediction 966 1009 - -
Vivi7g00462 1009 CDD STKc_IRAK 668 935 - -
Vivi7g00462 1009 Gene3D - 408 596 - -
Vivi7g00462 1009 Gene3D Ribonuclease Inhibitor 271 391 IPR032675 -
Vivi7g00462 1009 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672|GO:0006468
Vivi7g00462 1009 Gene3D Ribonuclease Inhibitor 35 201 IPR032675 -
Vivi7g00462 1009 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 35 199 - -
Vivi7g00462 1009 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 17 951 - -
Vivi7g00462 1009 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 633 737 - -
Vivi7g00462 1009 Gene3D Phosphorylase Kinase; domain 1 633 737 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00462 Vivi-Chr7 26641981 26651037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00462 4 1000 Receptor kinase-like Gene Family AT1G53440 60.396 0.0 1201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi7g00462 PK_Tyr_Ser-Thr 3.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00462 - - gmx:100815226 1508.43