Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00456 ATGACTTTGTTTTTCTTCTTCTCTCTCTTTTTACTCCTTCCTTTCTTCTTTGATTCATTTTCTCTAGGAGCCACTCTTCAGCAAGATGAAGTGAAAGCTCTGATAGACATAGGTAAAACACTTGGGAAGAAAGATTGGGACTTCAGTGTAGATCCATGTAGTGGACGAAACAACTGGATATCGTCAACTCAATTACAAGGTTCTGAAAATGCTGTTACTTGCAATTGCTCTTTTCAAAATAACACTCTCTGCCATGTTGTTAGCGTTGTCCTCAAAGCACAAAACCTTTCCGGTACTCTTCCACCTGATTTTGTGAGGTTGCCTTTTCTCCAAGAAATTGACCTTACACTCAACTATCTTAATGGTACAATTCCTAAAGAATGGGCTACATTAAGTCTTGTAAACATTTCCTTGAATGGAAATCGTCTATCTGGTTCAATTCCAAGGGAGTTTGGAAACATCATCACTCTTAAAAGCTTGGTATTGGAGTCCAATCAATTATCTAGAAATCTTCCTCCTGAACTCGGGAGTCTTCCCCGGCTTGAAAGACTGCTTCTTTCCTCTAACAACTTCACTGGAGTGTTGCCTGCAACATTTGCAAATCTCACTGCATTGAAGCAATTTCGAATTGGTGACAGTCAATTCTCTGGTGCCATACCCAACTTTATACAGAGCTGGAAAAATCTTGAGATGCTGGTGATCCGAGGGAGTGGTTTGAGCGGGCCAATTCCTTCTGGAATTTCATTTTTGAAAAACCTCACAGACTTGGTTATTACTGACTTGAATGGACCTGATTCACCATTTCCACAACTTGAAAATATGTCAAAGCTGTCAAAATTAGTGTTGAGAAGTTGCTATATCATTGGAGCAATGCCTAAAGATCTTGGAAAGTTGACTAATCTGAAAGTAATAGACCTCAGCAACAACAAATTGAGTGGACCGATCCCTGAGAGCTTCGGTGATCTACAGAACATGTATTTGCTATTTTTATCTGGGAATCAGTTGGCGGGGTCGCTGCCTGACTGGATAGATAAACCAGACTCTGTAGATCTGTCATATAATAACTTCAATATAACAAACTTTGAGCAGCAGGCTTGTCAACAAGGAACTGTGAACTTGTTTGCATCTTATTTGAAGGGAAACAGCTTAGGAAATATTTCATGTTTGGAAAACTATCAATGTCCTAAAACTTGGTACTCTCTCTATATAAATTGTGGTGGAAAGAGCGTAACATATGGAAATAAGACATATGATGATGATTCAAATGACATGGGACAAGCAAGGTATCGTCAAATTGGAACAAACTGGGCACTTATAACTTCGGGTCATTTCTTTGATAGCGGCCGCGCTGACTACTACAAATGGTCTAATGCAACTAAGCTTTCTGTCGTCGACGATCCTGAACTTTACATGGATGCGCGTGTTTCTCCAAATTATCTAACTTATTATGGATTCTGCCTTGGAAATGGAAACTACACTGTGAATCTCCATTTCGCAGAAATAATGTTCAGCGATGATAAAACATTTAGCAGCATTGGAAGACGTGTATTTGACATCTACATCCAGAGAAAGTTAGTGGAGAAGGATTTTGATATTGCAAAAGAAGCAGGTGGAGTTGGTAAGGCAGTCATTAAAAGTTTTACTGCCGAGGTGACTAGTAATGCATTGGAGATCCGCTTATATTGGGCTGGGAAAGGAACAACTACTATCCCATTTGGATCAGTATATGGGCCTCTTATATCAGCTATATCAGTTGATCCTGACTTTACACCCCCGTCGGAAAATAATAGTAGCATACCTGTAGGAGTTGTGGCTGCCATTGTGGTTGCAGGAGCAATTGTTATCATCTTTGTAATTGGCATAATGTGGTGGAAGGGATGTTTAACACAAAAGTGTTTAGGAGGGATAGGGAAAAAGAGTCTTGCTTCTCAAGGTGGCTTATTCACCTTACGGCAAATCAAAGTAGCAACAAACAACTTTGATGAATCCTTCAAGATTGGAGAAGGAGGATTTGGTCCGGTTTACAAGGGTGTTCTTCCGGGTGGCACAATAGTAGCGATTAAGCAGCTATCTTCTAAATCAACACAAGGATCTCGAGAATTTATTAATGAGATAGGCATGATTTCTACGTTACAACACCCTAATCTTGTCAAGCTCTATGGCTTCTGTATGGAGGATGATCAGTTGTTGCTGATATATGAATACATGGAAAACAATAGCCTTGCTCATGCTTTATTTGCCAAGAAAGAAGACCTAGAAAATCGTCAATCAAGATTGGACTGGAAAACCAGGATGAGGATTTGTATTGGTATATCTAAAGGTTTAGCTTACCTTCACGGAGAGTCGAAAATAAAGATCATTCATAGGGACATCAAGGCCACTAATGTATTGCTAGATAAAGACCTCAACCCCAAGATATCTGATTTTGGTTTGGCAAAGCTCAATGAAGATGACAAAACCCACATGAACACAAGAGTAGCTGGCACTTATGGATACATGGCTCCTGAGTATGCGATGCATGGCTATTTGACGGAGAGAGTAGATGTTTATAGTTTTGGAATTGTTGTGTTGGAAATTGTTAGCGGAACCAACAACACTGTTAGCCATCCCCAGGAGGAATGTTTCTCTCTTCTTGATTGGGTACACCTCTTGAAGGAAAAAGATAATCTAATGGAGCTCGTTGATCGGAGATTGGGTGAAGACTTCAAGAAAGATGAGGTAACGACAATGATCAATGTGGCTCTTTTATGCACGAGTTTTTCTCCGTCGCTCAGGCCCTCCATGTCTTCAGTAGTAAGCATGCTTGAAGGAAGAACAAATGTTCAAGAAGTAGTGGCAGAATCAACTGAGGTATTGGATGATAAGAAGTATAAGGTGATGCAACAATACTACAAACAGAGAGGAGAAAGTAGCACAAGTGAAGCTCAAAGCATAGGAACAGATGAATCTAATGCCCTTATTTATGGTACAGATTCTTCATACTGGGAACCAAGAAATCAGCAAAACTATAAAACTATGTAA 3021 0.3982 MTLFFFFSLFLLLPFFFDSFSLGATLQQDEVKALIDIGKTLGKKDWDFSVDPCSGRNNWISSTQLQGSENAVTCNCSFQNNTLCHVVSVVLKAQNLSGTLPPDFVRLPFLQEIDLTLNYLNGTIPKEWATLSLVNISLNGNRLSGSIPREFGNIITLKSLVLESNQLSRNLPPELGSLPRLERLLLSSNNFTGVLPATFANLTALKQFRIGDSQFSGAIPNFIQSWKNLEMLVIRGSGLSGPIPSGISFLKNLTDLVITDLNGPDSPFPQLENMSKLSKLVLRSCYIIGAMPKDLGKLTNLKVIDLSNNKLSGPIPESFGDLQNMYLLFLSGNQLAGSLPDWIDKPDSVDLSYNNFNITNFEQQACQQGTVNLFASYLKGNSLGNISCLENYQCPKTWYSLYINCGGKSVTYGNKTYDDDSNDMGQARYRQIGTNWALITSGHFFDSGRADYYKWSNATKLSVVDDPELYMDARVSPNYLTYYGFCLGNGNYTVNLHFAEIMFSDDKTFSSIGRRVFDIYIQRKLVEKDFDIAKEAGGVGKAVIKSFTAEVTSNALEIRLYWAGKGTTTIPFGSVYGPLISAISVDPDFTPPSENNSSIPVGVVAAIVVAGAIVIIFVIGIMWWKGCLTQKCLGGIGKKSLASQGGLFTLRQIKVATNNFDESFKIGEGGFGPVYKGVLPGGTIVAIKQLSSKSTQGSREFINEIGMISTLQHPNLVKLYGFCMEDDQLLLIYEYMENNSLAHALFAKKEDLENRQSRLDWKTRMRICIGISKGLAYLHGESKIKIIHRDIKATNVLLDKDLNPKISDFGLAKLNEDDKTHMNTRVAGTYGYMAPEYAMHGYLTERVDVYSFGIVVLEIVSGTNNTVSHPQEECFSLLDWVHLLKEKDNLMELVDRRLGEDFKKDEVTTMINVALLCTSFSPSLRPSMSSVVSMLEGRTNVQEVVAESTEVLDDKKYKVMQQYYKQRGESSTSEAQSIGTDESNALIYGTDSSYWEPRNQQNYKTM 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00456 1006 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 398 588 - -
Vivi7g00456 1006 Pfam Leucine rich repeat 276 335 IPR001611 GO:0005515
Vivi7g00456 1006 Gene3D Ribonuclease Inhibitor 27 260 IPR032675 -
Vivi7g00456 1006 Gene3D Transferase(Phosphotransferase) domain 1 736 962 - -
Vivi7g00456 1006 ProSitePatterns Serine/Threonine protein kinases active-site signature. 786 798 IPR008271 GO:0004672|GO:0006468
Vivi7g00456 1006 SMART serkin_6 660 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00456 1006 ProSiteProfiles Protein kinase domain profile. 660 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00456 1006 Pfam Protein tyrosine and serine/threonine kinase 665 935 IPR001245 GO:0004672|GO:0006468
Vivi7g00456 1006 SMART LRR_typ_2 298 321 IPR003591 -
Vivi7g00456 1006 SMART LRR_typ_2 322 346 IPR003591 -
Vivi7g00456 1006 SMART LRR_typ_2 178 201 IPR003591 -
Vivi7g00456 1006 SUPERFAMILY L domain-like 80 356 - -
Vivi7g00456 1006 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 195 262 - -
Vivi7g00456 1006 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 11 970 - -
Vivi7g00456 1006 CDD STKc_IRAK 666 937 - -
Vivi7g00456 1006 SUPERFAMILY Protein kinase-like (PK-like) 643 936 IPR011009 -
Vivi7g00456 1006 Gene3D - 398 587 - -
Vivi7g00456 1006 FunFam Putative LRR receptor-like serine/threonine-protein kinase 736 947 - -
Vivi7g00456 1006 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 635 735 - -
Vivi7g00456 1006 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase isoform A 30 189 - -
Vivi7g00456 1006 Gene3D Phosphorylase Kinase; domain 1 636 735 - -
Vivi7g00456 1006 Gene3D Ribonuclease Inhibitor 261 377 IPR032675 -
Vivi7g00456 1006 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 268 359 - -
Vivi7g00456 1006 Pfam Malectin domain 400 583 IPR021720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00456 Vivi-Chr7 26099416 26109098 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00456 20 985 Receptor kinase-like Gene Family AT1G53420 52.156 0.0 959
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi7g00456 PK_Tyr_Ser-Thr 2.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00456 - - gmx:100798947 1280