Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00435 ATGAGGACACACCTGTCTTCCCTTAACTCTCCGCTGATTTCCAACGTCACTCAGTTTTTGCATGTTTACTATATGCCAGGGACTAATAAATACAACGGTGATTCAAATCATATACCGGGACGTGTAGAAAGACGGTTGAGAGACAGAGAGTTGAGAAAAAGAGGAAGTGAAAACAATGAGTATTTGGAGCAGGATCATCAAGATAAAGATGATGTTGAGAAAGTATCATCTTCGTCAATAAGGGAGAGAAGATTACACGAAGGAGAAGATGTTGTTGGAAAGTATGATAGTAATAATAATAGACAGAGGCTTTTGGTTGTGGCTAACAGATTGCCCGTGTCGGCTATTAGAAAAGGTGAAGATAGTTGGTCTTTGGAGATTAGTGCAGGTGGCCTTGTTAGCGCTCTCCTAGGGGTGAAGGAGTTTGAGGCAAGGTGGATAGGTTGGGCCGGTGTCAATGTTCCGGATGAGGTTGGACAGAAGGCACTCACTAAAGCATTAGCTGAAAAGAGGTGTATACCTGTATTTCTGGATGAAGAGATTGTTCATCAATATTACAATGGCTACTGCAACAACATTCTATGGCCCCTTTTCCATTACCTTGGACTTCCACAAGAAGACCGTCTTGCCACCACACGAAGTTTCCAATCTCAATTTGCGGCCTATGAGAAAGCAAATCAGATGTTTGCCGATGTTGTCAACCAACATTATGAAGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTTATGTTCCTTCCAAAATGCTTGAAGAAATATAACAGTAAAATGAAAGTCGGGTGGTTTCTTCACACACCTTTTCCTTCTTCTGAAATTCACAGGACACTGCCTTCTCGTTCCGAGCTTTTGCATTCTGTTCTTGCAGCTGATTTAGTTGGTTTTCACACGTATGATTATGCAAGACATTTTGTTAGTGCGTGTACTCGCATCCTTGGACTTGAAGGTACACCTTACGGGGTTGAGCATCAAGGGAAGCTAACTGGAGTTGCCGCATTTCCAATTGGGATAGACTCAGAACGATTTATACGTGCGCTAGACCTTCCTCAAGTGCAGGAACATATCAAAGAATTGCAAGAAAGATTCAAAGGAAGAAAGGTCATGTTAGGTGTTGATCGCCTTGATATGATTAAAGGAATCCCTCAGAAAATTCTAGCATTTGAAAAGTTTTTGGAAGAAAATGCTCATTGGCGCGATAAAGTAGTTTTGCTTCAAATCGCCGTCCCAACAAGAACAGATGTTCCTGAATATCAAAAGCTTACAAGTCAGGTTCATGAAATTGTTGGCCGCATTAATGGTAGATTTGGATCATTGACTACTGTTCCTATACACCACCTGGATCGCTCTCTTGACTTTCATGAACTATGTGCTGTGTATGCAGTTACCGATGTAGCGCTAGTCACATCTTTAAGGGATGGAATGAATCTTGTGAGTTATGAATTTGTGGCCTGCCAGGAGAAAAAGAAAGGGGTTCTCATTCTCAGTGAATTTGCTGGTGCAGCTCAGTCTCTTGGTGCCGGGGCAATTCTTGTCAACCCCTGGAATGTTACAGAAGTTGCTGCTGCAATTGCAAGGGCTTTGAATATGCATCCCTCGGAAAGAGAAAAGAGACATAAGCATAATTTTCTTCATGTGAAATCCCACACTGCACAAGAATGGGCAGCAACTTTTGTCAGCGAACTAAATGATACTGTTATCGAGGCACAACTAAGGACTAGACAAGTTCCGCCTAAGCTTCCAACAGAGATTGCAATTAGACGTTATAGACATTCAACTAATAGATTGCTCATTTTGGGATTCAATGGAACTTTAACAGAACCGGTTGAAAAAACTGGAGATCAGATTAAAGAAATGGAACTTAAGGTGCATCCAGAACTGAGAGAACCCTTAACTGCACTTTGCAATGATCCAAATACCACAGTAGTTGTGCTCAGTGGAAGTGGTAGAAAAGTTCTATATGATTGTTTCAAAGATTACGACCTGTGGTTGGCAGCAGAGAACGGGATGTTTTTACAACCTTCAAAGGGTGAATGGATGACAACACTGCCGGAGCACCTGAATATGGAATGGGTCGACAGCGTGAAACATGTTTTTGAGTACTTCACAGAAAGAACACCACGGTCACACTTTGATTTGGAAGAAAGGGAAACTTCACTTGTATGGAATTACAAATACGCAGATGTCGAGTTTGGAAAACTTCAAGCAAGAGATATGCTGCAACATCTCTGGTCAGGTCCGATTTCTAATTCGTCAGTTGAAATTGTTCAAGGCAGCCGGTCGGTTGAGGTTAGAGCTGTTGGCGTTACAAAGGGAGCAGCTATTGACCGCATTCTCGGAGAGATAGTTCATAGTAAATCAATGACATCGCCAATTGATTATGTTCTTTGTATAGGACATTTTCTCGGAAAGGATGAAGATCTTTATTCCTTTTTTGAGCCGGAGCTTCCATCTATCGGTGCTGGTCTTCCGCGAAGCAATAAGGTACCAACAGAAGCAGTTAAGTCTCCTGTTGAGAAGAAACCACCTTTGAAAATTCCAGCTAGTAGTAAAAATGGAGCAAAGTCATCATCATCATCATCTCAAAACAAGGGAGTCTCAAATTCTGATCAGAAAAAAACAAATAATCAAATTTGCAGTTCACCACGACGCCCGGCTCCAGAAAATACATCACGGAATGTCCTTGACCTTAAGAAGGAGAATTACTTCTCATGTTCTGTAGGGCGGAACCGAACCAATGCGCGGTATACACTTGCCTCACCGGATCATGTTGTTGAGTTTTTGACGGAGCTAGCGGATGGACTACCGCGCTCTAGTTAA 2835 0.4215 MRTHLSSLNSPLISNVTQFLHVYYMPGTNKYNGDSNHIPGRVERRLRDRELRKRGSENNEYLEQDHQDKDDVEKVSSSSIRERRLHEGEDVVGKYDSNNNRQRLLVVANRLPVSAIRKGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYEKANQMFADVVNQHYEEGDVVWCHDYHLMFLPKCLKKYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLHSVLAADLVGFHTYDYARHFVSACTRILGLEGTPYGVEHQGKLTGVAAFPIGIDSERFIRALDLPQVQEHIKELQERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENAHWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGSLTTVPIHHLDRSLDFHELCAVYAVTDVALVTSLRDGMNLVSYEFVACQEKKKGVLILSEFAGAAQSLGAGAILVNPWNVTEVAAAIARALNMHPSEREKRHKHNFLHVKSHTAQEWAATFVSELNDTVIEAQLRTRQVPPKLPTEIAIRRYRHSTNRLLILGFNGTLTEPVEKTGDQIKEMELKVHPELREPLTALCNDPNTTVVVLSGSGRKVLYDCFKDYDLWLAAENGMFLQPSKGEWMTTLPEHLNMEWVDSVKHVFEYFTERTPRSHFDLEERETSLVWNYKYADVEFGKLQARDMLQHLWSGPISNSSVEIVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKSMTSPIDYVLCIGHFLGKDEDLYSFFEPELPSIGAGLPRSNKVPTEAVKSPVEKKPPLKIPASSKNGAKSSSSSSQNKGVSNSDQKKTNNQICSSPRRPAPENTSRNVLDLKKENYFSCSVGRNRTNARYTLASPDHVVEFLTELADGLPRSS 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00435 944 Gene3D Glycogen Phosphorylase B; 350 553 - -
Vivi7g00435 944 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 96 937 IPR001830 GO:0003824|GO:0005992
Vivi7g00435 944 SUPERFAMILY HAD-like 600 788 IPR036412 -
Vivi7g00435 944 CDD GT20_TPS 103 568 IPR001830 GO:0003824|GO:0005992
Vivi7g00435 944 MobiDBLite consensus disorder prediction 48 80 - -
Vivi7g00435 944 Gene3D - 690 772 - -
Vivi7g00435 944 Gene3D - 603 786 IPR023214 -
Vivi7g00435 944 Pfam Glycosyltransferase family 20 103 568 IPR001830 GO:0003824|GO:0005992
Vivi7g00435 944 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 350 552 - -
Vivi7g00435 944 MobiDBLite consensus disorder prediction 855 893 - -
Vivi7g00435 944 Pfam Trehalose-phosphatase 606 825 IPR003337 GO:0003824|GO:0005992
Vivi7g00435 944 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 103 568 IPR012766 GO:0003825|GO:0005992
Vivi7g00435 944 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 95 349 - -
Vivi7g00435 944 MobiDBLite consensus disorder prediction 827 899 - -
Vivi7g00435 944 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 690 772 - -
Vivi7g00435 944 CDD HAD_TPP 601 820 - -
Vivi7g00435 944 Gene3D Glycogen Phosphorylase B; 94 349 - -
Vivi7g00435 944 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 102 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00435 Vivi-Chr7 24499678 24505674 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00435 25 938 Trehalose Biosynthesis Gene Families AT1G78580 75.607 0.0 1431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00435 K16055 - gmx:100797320 1527.3