Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00433 ATGCCAGGGACTAATAAATACAACGGTGATTCAAATCATATACCGGGACGTGTAGAAAGACGGTTGAGAGACAGAGAGTTGAGAAAAAGAGGAAGTGAAAACAATGAGTATTTGGAGCAGGATCATCAAGATAAAGATGATGTTGAGAAAGTATCATCTTCGTCAATAAGGGAGAGAAGATTACACGAAGGAGAAGATGTTGTTGGAAAGTATGATAGTAATAATAATAGACAGAGGCTTTTGGTTGTGGCTAACAGATTGCCCGTGTCGGCTATTAGAAAAGGTGAAGATAGTTGGTCTTTGGAGATTAGTGCAGGTGGCCTTGTTAGCGCTCTCCTAGGGGTGAAGGAGTTTGAGGCAAGGTGGATAGGTTGGGCCGGTGTCAATGTTCCGGATGAGGTTGGACAGAAGGCACTCACTAAAGCATTAGCTGAAAAGAGGTGTATACCTGTATTTCTGGATGAAGAGATTGTTCATCAATATTACAATGGCTACTGCAACAACATTCTATGGCCCCTTTTCCATTACCTTGGACTTCCACAAGAAGACCGTCTTGCCACCACACGAAGTTTCCAATCTCAATTTGCGGCCTATGAGAAAGCAAATCAGATGTTTGCCGATGTTGTCAACCAACATTATGAAGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTTATGTTCCTTCCAAAATGCTTGAAGAAATATAACAGTAAAATGAAAGTCGGGTGGTTTCTTCACACACCTTTTCCTTCTTCTGAAATTCACAGGACACTGCCTTCTCGTTCCGAGCTTTTGCATTCTGTTCTTGCAGCTGATTTAGTTGGTTTTCACACGTATGATTATGCAAGACATTTTGTTAGTGCGTGTACTCGCATCCTTGGACTTGAAGGTACACCTTACGGGGTTGAGCATCAAGGGAAGCTAACTGGAGTTGCCGCATTTCCAATTGGGATAGACTCAGAACGATTTATACGTGCGCTAGACCTTCCTCAAGTGCAGGAACATATCAAAGAATTGCAAGAAAGATTCAAAGGAAGAAAGGTCATGTTAGGTGTTGATCGCCTTGATATGATTAAAGGAATCCCTCAGAAAATTCTAGCATTTGAAAAGTTTTTGGAAGAAAATGCTCATTGGCGCGATAAAGTAGTTTTGCTTCAAATCGCCGTCCCAACAAGAACAGATGTTCCTGAATATCAAAAGCTTACAAGTCAGGTTCATGAAATTGTTGGCCGCATTAATGGTAGATTTGGATCATTGACTACTGTTCCTATACACCACCTGGATCGCTCTCTTGACTTTCATGAACTATGTGCTGTGTATGCAGTTACCGATGTAGCGCTAGTCACATCTTTAAGGGATGGAATGAATCTTGTGAGTTATGAATTTGTGGCCTGCCAGGAGAAAAAGAAAGGGGTTCTCATTCTCAGTGAATTTGCTGGTGCAGCTCAGTCTCTTGGTGCCGGGGCAATTCTTGTCAACCCCTGGAATGTTACAGAAGTTGCTGCTGCAATTGCAAGGGCTTTGAATATGCATCCCTCGGAAAGAGAAAAGAGACATAAGCATAATTTTCTTCATGTGAAATCCCACACTGCACAAGAATGGGCAGCAACTTTTGTCAGCGAACTAAATGATACTGTTATCGAGGCACAACTAAGGACTAGACAAGTTCCGCCTAAGCTTCCAACAGAGATTGCAATTAGACGTTATAGACATTCAACTAATAGATTGCTCATTTTGGGATTCAATGGAACTTTAACAGAACCGGTTGAAAAAACTGGAGATCAGATTAAAGAAATGGAACTTAAGGTGCATCCAGAACTGAGAGAACCCTTAACTGCACTTTGCAATGATCCAAATACCACAGTAGTTGTGCTCAGTGGAAGTGGTAGAAAAGTTCTATATGATTGTTTCAAAGATTACGACCTGTGGTTGGCAGCAGAGAACGGGATGTTTTTACAACCTTCAAAGGGTGAATGGATGACAACACTGCCGGAGCACCTGAATATGGAATGGGTCGACAGCGTGAAACATGTTTTTGAGTACTTCACAGAAAGAACACCACGGTCACACTTTGATTTGGAAGAAAGGGAAACTTCACTTGTATGGAATTACAAATACGCAGATGTCGAGTTTGGAAAACTTCAAGCAAGAGATATGCTGCAACATCTCTGGTCAGGTCCGATTTCTAATTCGTCAGTTGAAATTGTTCAAGGCAGCCGGTCGGTTGAGGTTAGAGCTGTTGGCGTTACAAAGGGAGCAGCTATTGACCGCATTCTCGGAGAGATAGTTCATAGTAAATCAATGACATCGCCAATTGATTATGTTCTTTGTATAGGACATTTTCTCGGAAAGGATGAAGATCTTTATTCCTTTTTTGAGCCGGAGCTTCCATCTATCGGTGCTGGTCTTCCGCGAAGCAATAAGGTACCAACAGAAGCAGTTAAGTCTCCTGTTGAGAAGAAACCACCTTTGAAAATTCCAGCTAGTAGTAAAAATGGAGCAAAGTCATCATCATCATCATCTCAAAACAAGGGAGTCTCAAATTCTGATCAGAAAAAAACAAATAATCAAATTTGCAGTTCACCACGACGCCCGGCTCCAGAAAATACATCACGGAATGTCCTTGACCTTAAGAAGGAGAATTACTTCTCATGTTCTGTAGGGCGGAACCGAACCAATGCGCGGTATACACTTGCCTCACCGGATCATGTTGTTGAGTTTTTGACGGAGCTAGCGGATGGACTACCGCGCTCTAGTTAA 2763 0.4213 MPGTNKYNGDSNHIPGRVERRLRDRELRKRGSENNEYLEQDHQDKDDVEKVSSSSIRERRLHEGEDVVGKYDSNNNRQRLLVVANRLPVSAIRKGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYEKANQMFADVVNQHYEEGDVVWCHDYHLMFLPKCLKKYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLHSVLAADLVGFHTYDYARHFVSACTRILGLEGTPYGVEHQGKLTGVAAFPIGIDSERFIRALDLPQVQEHIKELQERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENAHWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGSLTTVPIHHLDRSLDFHELCAVYAVTDVALVTSLRDGMNLVSYEFVACQEKKKGVLILSEFAGAAQSLGAGAILVNPWNVTEVAAAIARALNMHPSEREKRHKHNFLHVKSHTAQEWAATFVSELNDTVIEAQLRTRQVPPKLPTEIAIRRYRHSTNRLLILGFNGTLTEPVEKTGDQIKEMELKVHPELREPLTALCNDPNTTVVVLSGSGRKVLYDCFKDYDLWLAAENGMFLQPSKGEWMTTLPEHLNMEWVDSVKHVFEYFTERTPRSHFDLEERETSLVWNYKYADVEFGKLQARDMLQHLWSGPISNSSVEIVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKSMTSPIDYVLCIGHFLGKDEDLYSFFEPELPSIGAGLPRSNKVPTEAVKSPVEKKPPLKIPASSKNGAKSSSSSSQNKGVSNSDQKKTNNQICSSPRRPAPENTSRNVLDLKKENYFSCSVGRNRTNARYTLASPDHVVEFLTELADGLPRSS 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00433 920 Pfam Glycosyltransferase family 20 79 544 IPR001830 GO:0003824|GO:0005992
Vivi7g00433 920 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 666 748 - -
Vivi7g00433 920 Gene3D - 666 748 - -
Vivi7g00433 920 Gene3D Glycogen Phosphorylase B; 326 529 - -
Vivi7g00433 920 CDD GT20_TPS 79 544 IPR001830 GO:0003824|GO:0005992
Vivi7g00433 920 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 71 325 - -
Vivi7g00433 920 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 326 528 - -
Vivi7g00433 920 MobiDBLite consensus disorder prediction 13 56 - -
Vivi7g00433 920 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 72 913 IPR001830 GO:0003824|GO:0005992
Vivi7g00433 920 SUPERFAMILY HAD-like 576 764 IPR036412 -
Vivi7g00433 920 Gene3D - 579 762 IPR023214 -
Vivi7g00433 920 MobiDBLite consensus disorder prediction 1 56 - -
Vivi7g00433 920 Gene3D Glycogen Phosphorylase B; 70 325 - -
Vivi7g00433 920 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 79 544 IPR012766 GO:0003825|GO:0005992
Vivi7g00433 920 CDD HAD_TPP 577 796 - -
Vivi7g00433 920 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 78 546 - -
Vivi7g00433 920 MobiDBLite consensus disorder prediction 803 875 - -
Vivi7g00433 920 Pfam Trehalose-phosphatase 582 801 IPR003337 GO:0003824|GO:0005992
Vivi7g00433 920 MobiDBLite consensus disorder prediction 831 869 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00433 Vivi-Chr7 24490798 24505673 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00433 1 914 Trehalose Biosynthesis Gene Families AT1G78580 75.607 0.0 1432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00433 K16055 - gmx:100797320 1527.3