Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00420 ATGCTGACAGACGCAGAAGAACGCGAATCCTTCAATTCCGTGTTGGGACGCATCTTACTATGCAAAATCTGTGGTCGTAATCGAAGGCATCAAAGGCTCGAGAAATCTTTCACTTACAGCAACTTCATACATGAAATCCAACCGTTTGATTATGATAATATGGAGTTTCTTAAAATTCTCGGTGAAGGAAGTTACGGTAGGGTTTCTCAATTCCGTATCGTCAATGATAACAGCATTGTGGCCGTTAAACAAATCTCGATTGCCAACACTTCCGATGCTGTTCCTGGTTTCATCATCAGAGAGGTCTCCTTTCTAAAAGAATTGAATCATCCAAACATTGTTAGGTTATTGAATGTAACGAACAATAAGGATACAAATGTGGTGAGCCTTGTTTTCGAGTGTCTTGATTGCGATCTTGACAAGTACATTAAAGAGAAAGATCGCTACGGTTCAGCTATTAATAATCCCTTCACAAGAAAGAGTTTTCTGTATCAAATATTATCTGCTGTGGAGTACTGTCATTCTCATCAGATTATGCACAGAGACTTGAAACCGCGTAATCTTCTAATCGATCATTCTAAAAAGATAATCAAACTTGCTGATTTTGGTTGGGCTAGAGAGTTGGGAGATCCAGAAAAGTTCTATACTGATAAGATAGCAACTCGGTGGTATAGGGCACCTGAAGTTCTGTTTCTTAACGGTCAATACTCAACTCCAATGGATATTTGGGCTGTGGGCTGTATATTTGGTGAGATGGTACTTGGACAGCCAATACACAATGTTTTTAATTGCACTGGTGAGCTACAGCTGATTTTCAGAATGTTTGGTACACCAACAGAGGAAACGTGGCCAGGGGTCACTAAATTATGTACCAACCTTCAAGCCTATACCAAATCTGACCCAATGGACCTTTCAACAATTTTTCATGATCTTGATCCAACTGGTCTTAATCTGCTAACGAGGATGCTTTGCCTGGACCCAAACAAGAGGATTTCAGCGGAAGCTGCTCTAAAGCATGCTTACTTTAATGACTTGGATCAGGTAGGTTATTAA 1053 0.4008 MLTDAEERESFNSVLGRILLCKICGRNRRHQRLEKSFTYSNFIHEIQPFDYDNMEFLKILGEGSYGRVSQFRIVNDNSIVAVKQISIANTSDAVPGFIIREVSFLKELNHPNIVRLLNVTNNKDTNVVSLVFECLDCDLDKYIKEKDRYGSAINNPFTRKSFLYQILSAVEYCHSHQIMHRDLKPRNLLIDHSKKIIKLADFGWARELGDPEKFYTDKIATRWYRAPEVLFLNGQYSTPMDIWAVGCIFGEMVLGQPIHNVFNCTGELQLIFRMFGTPTEETWPGVTKLCTNLQAYTKSDPMDLSTIFHDLDPTGLNLLTRMLCLDPNKRISAEAALKHAYFNDLDQVGY 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00420 350 ProSiteProfiles Protein kinase domain profile. 54 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00420 350 PANTHER CELL DIVISION PROTEIN KINASE 53 342 - -
Vivi7g00420 350 Gene3D Phosphorylase Kinase; domain 1 55 134 - -
Vivi7g00420 350 FunFam Mitogen-activated protein kinase 135 348 - -
Vivi7g00420 350 SMART serkin_6 54 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00420 350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Vivi7g00420 350 Gene3D Transferase(Phosphotransferase) domain 1 135 346 - -
Vivi7g00420 350 SUPERFAMILY Protein kinase-like (PK-like) 49 345 IPR011009 -
Vivi7g00420 350 Pfam Protein kinase domain 55 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00420 350 ProSitePatterns Protein kinases ATP-binding region signature. 60 83 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00420 Vivi-Chr7 23518480 23522243 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00420 52 345 Core Cell Cycle Gene Families AT3G48750 45.918 7.33e-90 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Vivi7g00420 Pkinase 2.3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00420 K02206 - vvo:131617029 714.531