Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00419 ATGGGGCCGTTAGATGATACTAATATGGAGTTTCTTGAAATTCTCGGTCAAGGAAGTTTCGGTAGGGTTTCTCAATACCGTATCACTAATGATGACAGCATTGTGGCCGTTAAAGAAATCTCGATTGCGAACGCTTCCAATGCTGTTCCTGGTTGCATCATCAGAGAGGTCTCGTTTCTAAAAGAATTGAATCATCCAAACATTGTTAGGTTATTGAATGTAACGAGCAATGAGGAAACAAATACGGTGAGCCTTGTTTTCGAGTGTCTTGATTGCGATCTTAACAAGTACATTAAACAGAAACAACGCTACGGTTCATTGGTTCATAGTCCCTTCAGAAGAAAGAGTTTTCTGCATCAGATTTTATCTGCTGTGGAGTACTGTCATTCTCATAAGATTATTCACAGAGACTTAAAACCAAGTAACCTTCTAATCGATCATAAGAAAAAGATAATCAAACTGGCCGATTTTGGTTTGGCTAGAGAGTTAGGAGATCATGAAATGCTCTATACAAAGAAGATAGCAACTCGGTGGTATAAAGCACCAGAAGTTTTGTTTAATAAAGGTCAATATTCAACTCCAATGGATATTTGGGCTGTGGGCTGTATATTTGGTGAGATGGTACTTGGACAACCGATACACAGTGTTTTTGATTGCATTGGTGAGCTAGAGCTGATTTTCAGAATGTTTGGTACACCAACAGAGGAAACATGGCCAGGGGTCACTAAATTATGTGATAACCTTCAAGACTATTCGGAATCTGATCCAATGGACCTTTCAACAATTTTTCATGATCTTGATCCAAGTGGTCTTAATCTTCTAACGAGGATGCTTTGCCTGGACCCTAACAAGAGGATTTCAGCAGAAGCTGCTCTAAAGCATCCTTACTTCAATGACTTGGTTCAGGGAATTCTTCTATCCACACTCTATTTTTGTAAAAATGAGCTTGATGAGCTAACAATTGGGCCTACTTGA 975 0.3918 MGPLDDTNMEFLEILGQGSFGRVSQYRITNDDSIVAVKEISIANASNAVPGCIIREVSFLKELNHPNIVRLLNVTSNEETNTVSLVFECLDCDLNKYIKQKQRYGSLVHSPFRRKSFLHQILSAVEYCHSHKIIHRDLKPSNLLIDHKKKIIKLADFGLARELGDHEMLYTKKIATRWYKAPEVLFNKGQYSTPMDIWAVGCIFGEMVLGQPIHSVFDCIGELELIFRMFGTPTEETWPGVTKLCDNLQDYSESDPMDLSTIFHDLDPSGLNLLTRMLCLDPNKRISAEAALKHPYFNDLVQGILLSTLYFCKNELDELTIGPT 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00419 324 FunFam CMGC family protein kinase 92 303 - -
Vivi7g00419 324 Gene3D Phosphorylase Kinase; domain 1 10 89 - -
Vivi7g00419 324 SMART serkin_6 9 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00419 324 Gene3D Transferase(Phosphotransferase) domain 1 90 300 - -
Vivi7g00419 324 Pfam Protein kinase domain 10 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00419 324 ProSiteProfiles Protein kinase domain profile. 9 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00419 324 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Vivi7g00419 324 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Vivi7g00419 324 PANTHER CELL DIVISION PROTEIN KINASE 9 297 - -
Vivi7g00419 324 SUPERFAMILY Protein kinase-like (PK-like) 10 300 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00419 Vivi-Chr7 23503718 23506220 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00419 10 300 Core Cell Cycle Gene Families AT3G48750 45.361 8.56e-89 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Vivi7g00419 Pkinase 1.5e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00419 K02206 - vvo:131617029 517.309