Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00404 ATGGGGCCGTTAGATGATACTAATATGGAGTTTCTTGAAATTCTCGGTCAAGGAAGTTTCGGTAGGGTTTCTCAATACCGTATCACTAATGATGACAGCATTGTGGCCGTTAAAGAAATCTCGATTGCGAACGCTTCCAATGCTGTTCCTGGTTGCATCATCAGAGAGGTCTCGTTTCTAAAAGAATTGAATCATCCAAACATTGTTAGGTTATTGAATGTAACGAGCAATGAGGAAACAAATACGGTGAGCCTTGTTTTCGAGTGTCTTGATTGCGATCTTAACAAGTACATTAAACAGAAACAACTCTACGGTTCATTGGTTCATAGTCCCTTCAGAAGAAAGAGTTTTCTGCATCAGATTTTATCTGCTGTGGAGTACTGTCATTCTCATAAGATTATTCACAGAGACTTAAAACCAAGTAACCTTCTAATCGATCATAAGAAAAAGATAATCAAACTGGCCGATTTTGGTTTGGCTAGAGAGTTAGGAGATCCTGAAATGCTCTATACAAAGAAGATAGCAACTCGGTGGTATAAAGCACCAGAAGTTTTGTTTAATAAAGGTCAATATTCAACTCCAATGGATATTTGGGCTGTGGGCTGTATATTTGGTGAGATGGTACTTGGACAACCGATACACAGTGTTTTTGATTGCATTGGTGAGCTAGAGCTGATTTTCAGAATGTTTGGTACACCAACAGAGGAAACATGGCCAGGGGTCACTAAATTATGTGATAACCTTCAAGACTATTCGGAATCTGATCCAATGGACCTTTCAACAATTTTTCATGATCTTGATCCAAGTGGTCTTAATCTTCTAACGAGGATGCTTTGCCTGGACCCAAACAAGAGGATTTCAGCAGAAGCTGCTCTAAAGCATCCTTACTTTTATGACTTGGTTCAGGAAAAACCTTATTGGTACTCTCATGAACTCATTGCTTATAATAGAAAGCCTGAAGCTGTTATATGCCATTCATAA 981 0.3884 MGPLDDTNMEFLEILGQGSFGRVSQYRITNDDSIVAVKEISIANASNAVPGCIIREVSFLKELNHPNIVRLLNVTSNEETNTVSLVFECLDCDLNKYIKQKQLYGSLVHSPFRRKSFLHQILSAVEYCHSHKIIHRDLKPSNLLIDHKKKIIKLADFGLARELGDPEMLYTKKIATRWYKAPEVLFNKGQYSTPMDIWAVGCIFGEMVLGQPIHSVFDCIGELELIFRMFGTPTEETWPGVTKLCDNLQDYSESDPMDLSTIFHDLDPSGLNLLTRMLCLDPNKRISAEAALKHPYFYDLVQEKPYWYSHELIAYNRKPEAVICHS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00404 326 Gene3D Phosphorylase Kinase; domain 1 10 89 - -
Vivi7g00404 326 PANTHER CELL DIVISION PROTEIN KINASE 9 297 - -
Vivi7g00404 326 SMART serkin_6 9 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00404 326 ProSiteProfiles Protein kinase domain profile. 9 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00404 326 FunFam CMGC family protein kinase 92 303 - -
Vivi7g00404 326 Gene3D Transferase(Phosphotransferase) domain 1 90 303 - -
Vivi7g00404 326 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Vivi7g00404 326 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Vivi7g00404 326 Pfam Protein kinase domain 10 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00404 326 SUPERFAMILY Protein kinase-like (PK-like) 10 301 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00404 Vivi-Chr7 23141187 23142895 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00404 10 300 Core Cell Cycle Gene Families AT3G48750 45.704 3.27e-89 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Vivi7g00404 Pkinase 3.8e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00404 K02206 - vvo:131617029 517.309