LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi7g00394	ATGATGGTGAGGGTGACAGTTATGAAAGCTCATGTCGACGATGTTGATAATACCGATGAAGATGATTCGGCTGAATTAGATGCAGTTGAAGGGGATGATGATGTCGACGATGCTAATAATGGCGATGAAGATTATTCGGCAGAATTAGATGCATCTGTAGGCGATGATGATGATGTCGACGATGCTGATAATAGCGATGAAGATGATTTGGCAAAATTAGATGCAGTTGTAGGCGATAAAAGGGTAAGTATTGGTAACATGACTTCTGCTGATATTCGTGCTATGGAATTTGATTTTGTTGATGAAGCTTATGATTTTTATTATAAGTATGGTAAATGCAAAGGTTTTTCCGTAAGGAAAAGTGATATTAGGAGTAGAGGGTCTGAAGGTAGTAAAATAATAGTAATGAGGCAGCTTGTATGCAACAAGCATGGTTTAAGAGACGATAAACACGTTAGTAGGTTAGATAGGAAAAGAGATGAGAGATGTATTAACCGTACTAATTGCTTAGCTAGGCTTCGTGTACACTACAACACAAAAAAGGGTAGATATGTATTGTCATTTTTTGAAGAGACTCATAACCATGAATTAACCCCATATAGGTTTACGCACTTACACCCCGTTAATCGTCAAATTTCTGAAGCTGATAAAGCTCACATTGATGGTCTTCAGTCGCATAAAATTAGAACTTGTCATATAATGGGGTACATGGTTGCTCAGAAGGGTGGTTACGCTAGTGTTGGATTTACAAAGAAAGATCTGTACAATTATTTAGATAAAAAAATGTGTGACCTTATAAAAGATGGTGACATTGCCGCTTCTTTAAATTATCTAAATGTAAAGTCGTCTACTGATCCCATGCTATATGCAAAATATACCGTCGACGGTGATGGACGACTGAGGTCTCTTTTTTGGGCTGATGGGAGCAGTAGATCCGACTATTTTTGTTTTGGCGATGTGGTTGCGTTTGACACAACTTACAAGAAGAACAAATACAACTAA	1002	0.3762	MMVRVTVMKAHVDDVDNTDEDDSAELDAVEGDDDVDDANNGDEDYSAELDASVGDDDDVDDADNSDEDDLAKLDAVVGDKRVSIGNMTSADIRAMEFDFVDEAYDFYYKYGKCKGFSVRKSDIRSRGSEGSKIIVMRQLVCNKHGLRDDKHVSRLDRKRDERCINRTNCLARLRVHYNTKKGRYVLSFFEETHNHELTPYRFTHLHPVNRQISEADKAHIDGLQSHKIRTCHIMGYMVAQKGGYASVGFTKKDLYNYLDKKMCDLIKDGDIAASLNYLNVKSSTDPMLYAKYTVDGDGRLRSLFWADGSSRSDYFCFGDVVAFDTTYKKNKYN	333

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi7g00394	333	MobiDBLite	consensus disorder prediction	17	66	-	-
	Vivi7g00394	333	Pfam	FAR1 DNA-binding domain	105	198	IPR004330	-
	Vivi7g00394	333	PANTHER	OS01G0519700 PROTEIN	92	324	-	-
	Vivi7g00394	333	MobiDBLite	consensus disorder prediction	11	66	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi7g00394	Vivi-Chr7	22960116	22964810	Dispersed/Tandem

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Vivi7g00394		FAR1	3.9e-19	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi7g00394	-		-	vvo:131620385	654.44