Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00390 ATGGGGAAGAACAAGAAGAAGAGAAGTAGGGTTTCCGTCTCCGACGAAGACGAAGAAATTGAAACCAATAACAACAACGATTCCAATCAGAGCCAAAGCTCACTCTACCAGGTTCTCGGTGTGGAGAGTACAGCGACGCAACAGGAGATTAAGAAGGCGTATCACAAATTGGCGTTGAGGCTTCATCCTGATAAGAACCCTGGTGATGAGGAAGCTAAAACTAAGTTTCAGCAATTGCAAAATGTTATCTCAATTCTTGGAGATGAACAAAAACGGGCAATGTATGATCAGACCGGTTCAGTTGAACATGCTGACCTTGCTGGAGATGTTGCTCAGAATCTTCACGAATATTTCAGAACAATGTACAAGAAGGTCACCGAAGCTGATATTGAGGAGTTTGAAGCAAACTACAGGGGATCTGACTCTGAGAAAAGTGATTTGATTAATCTCTACAAGGAATGCAAGGGTAATATGAACAGGTTATTCTGTTCAATGCTTTGTTCGGATCCTAAACTCGACTCACACCGATTCAAGGATATTATTGATGAGGCCATAACTTCTGGAGAATTAAAGGAAAAGAAAGCATACAAGAAATGGGCAAAGAAAATATCAGAAACCAAGCCACCAACTAGTCCTTTAAGGAGGGAAAAAGCAAATAAGAAGCCAAAAACAGATTTGTATGCTATCATATCAAAACGACAAAATGAGAGAAAAGGCCGGCTTGACTCTATGTTCTCCTCTTTAATTTCAAAATATGGTGGAGACCATGTGCCAGAACCGTCTGAAGAGGAATTTGAAGCTACACGAAGAAAGATGGAAAGCCGAAGATCCTCAAAAAAGGCAAAGCGAAAATAA 855 0.4058 MGKNKKKRSRVSVSDEDEEIETNNNNDSNQSQSSLYQVLGVESTATQQEIKKAYHKLALRLHPDKNPGDEEAKTKFQQLQNVISILGDEQKRAMYDQTGSVEHADLAGDVAQNLHEYFRTMYKKVTEADIEEFEANYRGSDSEKSDLINLYKECKGNMNRLFCSMLCSDPKLDSHRFKDIIDEAITSGELKEKKAYKKWAKKISETKPPTSPLRREKANKKPKTDLYAIISKRQNERKGRLDSMFSSLISKYGGDHVPEPSEEEFEATRRKMESRRSSKKAKRK 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00390 284 SUPERFAMILY Chaperone J-domain 33 108 IPR036869 -
Vivi7g00390 284 ProSiteProfiles dnaJ domain profile. 34 99 IPR001623 -
Vivi7g00390 284 MobiDBLite consensus disorder prediction 251 284 - -
Vivi7g00390 284 Pfam DnaJ domain 35 96 IPR001623 -
Vivi7g00390 284 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 22 284 IPR042977 -
Vivi7g00390 284 Gene3D DnaJ domain 18 125 IPR036869 -
Vivi7g00390 284 SMART dnaj_3 33 91 IPR001623 -
Vivi7g00390 284 MobiDBLite consensus disorder prediction 256 273 - -
Vivi7g00390 284 PRINTS DnaJ domain signature 71 91 IPR001623 -
Vivi7g00390 284 PRINTS DnaJ domain signature 54 69 IPR001623 -
Vivi7g00390 284 PRINTS DnaJ domain signature 36 54 IPR001623 -
Vivi7g00390 284 PRINTS DnaJ domain signature 91 110 IPR001623 -
Vivi7g00390 284 MobiDBLite consensus disorder prediction 203 224 - -
Vivi7g00390 284 MobiDBLite consensus disorder prediction 1 35 - -
Vivi7g00390 284 CDD DnaJ 36 88 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00390 Vivi-Chr7 22869682 22873344 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00390 36 96 C2H2 Transcription Factor Family AT1G74250 37.879 3.10e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00390 K09529 - gmx:100781463 394.815