Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00387 ATGAGACTCTGTTATTTGAGTTCTAAACTTGTTATTATTACTACTCTTTCTTTCCTCTTCACCTGTTTGTTTAAGTTTTCACAAGCTCAAACTGCTGCAAACGCCACTACAGATCCATCTGAAGCAAGAGCTCTAAATTCAATATTCAGCAAATGGAAAATAAAAGCAGACAATACTCAATGGAACATAAGCGGTGAGCTATGCAGTGGAAAAGCAATTGTTAGCAGTATCGACATTGAGGACCAAACTTATGACCCATTCATCAAATGTGATTGTTCCTATAACAACCAAACTACTTGCCACATCACTGCATTGAAAGTTTATTCATTGGATGTGATCGGTGAAATTCCACCAGAGCTATGGACTCTCACTTACCTAACCAATTTGAAAATCAGCCAGAATTACTTGACTGGTACTCTACCTCCGGCAATTGGAAATCTGACTCGAATGCAATACATGTCTATTGGCATCAATTCTTTATCAGGACAGCTTCCAAAGGAATTGGGAAACCTTATTGATTTGATTGTATTGGGTTTTGGGTCTAATAACTTCTCAGGATCTTTGCCATCTGAACTTGGAAATTTGGTAAAACTACGAGAACTCTACTTGGATAGTTCTGGAATAAGTGGTCCAATTCCACAAACATTTGCAAGTCTTACGAGTTTGACGACAATATGGGCTTCAGACACAGAACTTACAGGGAAAATACCCGACTTCATAGGAAATTTGCCTAAGCTTCAATCCTTGAGATTTCAGGGTAATTCCCTTCAAGGTCCAATACCCTTGTCATTTTCAAATTTGACTGCGTTGACAGAATTGAGAATAAGTGGTCTATCAAATGGGAGCTCCTCATTGGATGCAATAAAGAACATGAAGTCTATCACAATCTTAGAATTGAGGAATAACAATATTTCTGGTTCAATTCCTTCCTTCATTGGAGAATACCAAAATTTGACTCAGCTGGACTTAAGCTTCAATAACCTCTCAGGACAAATTCCCGGATCAATTTTCAATTTGAGCTCGCTCTCTTCCTTGTTTCTTGGAAATAACACACTTAATGGCAGTCTCCCTCGGCAGAAAAGTTCATCTCTTAAAAATATTGACTTGTCATACAATGACATATCAGGAAGCTTCCCCTCTTGGATAAACGAACAAAATCTAGAACTGAACTTAGTAGCCAACAACTTGACAATAGATGATTCAAATAGCAGTGGTTTTCCTACTGGATTAAACTGTCTCCAGAGAACTTTTCCATGCAATCGTGGTGCTGCTGCAAGATATTCTGACTTCGCGATCAAGTGCGGTGGTACTCAAATTAGAACTACAGATGGAATTGTGTATCAAACGGACAATGAGACACTCGGTCCTGCTACATACTTTGTTACAGATACAGAAAGATGGGCTGTTAGTAATGTTGGAATATTTACGGGGAGCAACAATCCCGTGTTCAAAAGTTTTGTGACTAATCAGTTCACTGGTACTGTGAACCCAGAGATTTTTCAAACTGCTCGACTCTCTGCATCATCATTAAGATATTACGGTTTGGGGCTAGAAAATGGCTTTTATAACATTACTCTCCAATTTGCGGAAACAGCTATTCTCGATTCCACTACATGGAAAAGCCTCGGGAGAAGAGTATTTGATATTTATATCCAGGGGACTCGTGTTTTGAAGGATTTTGACATACAAAAACAAGCCGGAGGTGTCTCTTATAGAGCTGTTCAAAAACAATTTAGGTTTGAAGTGAAAGAAAACTATGTCGAGATCCATCTTTATTGGGCCGGAAAAGGGACTTGTTGCATACCTGGTCAAGGTACTTATGGGCCCTTGATTCAAGCCATCAGTGCTACACCAGATTTCATACCTACTGTCAGCAACAAACCTCCCAGCAGTAAAAAGAATAGAGCAGGTCTAATCATTGGAGTTGTTGTTGGTGTTGGAGTTGTATGCTTTCTATCAATTTTTGCCATTTTCTGTATCATTCGGAGAAGAAAACGCTATGATGATGATGATGAGCTTTTAGGCATTGATACAATGCCAAACACTTTCAGCTACTATGAGTTAAAAAATGCTACAAGTGACTTCAACCGTGACAATAAACTCGGAGAAGGAGGTTTTGGACCTGTTTATAAGGGGACACTTAATGATGGAAGAGATGTGGCTGTCAAACAATTATCTATAGGATCCCATCAAGGAAAGAGCCAGTTTGTAGCGGAGATTGCTACTATATCTGCTGTGCAACACCGTAATCTTGTCAAATTATATGGATGTTGTATTGAAGGGAGTAAAAGACTTCTTGTCTATGAGTATCTAGAAAATAAGAGTCTTGATCAAGCATTGTTTGGAAATGTTTTATTTCTCAATTGGCCGACCCGCTATGATATTTGTATGGGTGTTGCAAGAGGTTTGACATATTTGCATGAGGAGTCACGGCTTCGTATTGTGCACCGTGATGTGAAGGCTAGTAATATTCTACTCGATTCTGAACTTATCCCAAAAATATCTGACTTTGGGTTGGCCAAATTATATGATGATAAAAAGACACATATAAGCACCCGTGTTGCTGGGACAATTGGATACCTTGCACCGGAGTATGCCATGCGTGGACACCTTACAGAGAAAGCCGATGTTTTCTCCTTTGGTGTTGTGGCTCTCGAGTTAGTCAGTGGAAGGCCAAATTCTGATTCAAGTTTAGAAGGAGAGAAGATGTATCTTCTAGAATGGGCCTGGCAGCTTCACGAAAGGGGTTGTACAAATGATTTGATCGATCCTAGACTATCAGAATTCAACAAGGAAGAAGTCCAACGCCTTGTGGGAATAGCACTTTTGTGCACTCAAACATCACCAACTTTACGGCCACCGATGTCACGTGTAGTGGCAATGCTTTCAGGAGATATTGAAGTGAGCGCTGTAACAGCAAGGCCCGGATATCTGACTGACTGGAAATTTGACGATGTGAGTAGCATCATGACCGACATTTCATTGAAGGGATTAGATACAAGTAATTACAATTCAACAGCTAGTACAAGCATTGCTGTTGGAGCTGATCAAAATTCACCAAATGATCCTTCTAAATCCATCCTTCATGACACTCTTAGAGAGGGTAGGTAA 3111 0.3976 MRLCYLSSKLVIITTLSFLFTCLFKFSQAQTAANATTDPSEARALNSIFSKWKIKADNTQWNISGELCSGKAIVSSIDIEDQTYDPFIKCDCSYNNQTTCHITALKVYSLDVIGEIPPELWTLTYLTNLKISQNYLTGTLPPAIGNLTRMQYMSIGINSLSGQLPKELGNLIDLIVLGFGSNNFSGSLPSELGNLVKLRELYLDSSGISGPIPQTFASLTSLTTIWASDTELTGKIPDFIGNLPKLQSLRFQGNSLQGPIPLSFSNLTALTELRISGLSNGSSSLDAIKNMKSITILELRNNNISGSIPSFIGEYQNLTQLDLSFNNLSGQIPGSIFNLSSLSSLFLGNNTLNGSLPRQKSSSLKNIDLSYNDISGSFPSWINEQNLELNLVANNLTIDDSNSSGFPTGLNCLQRTFPCNRGAAARYSDFAIKCGGTQIRTTDGIVYQTDNETLGPATYFVTDTERWAVSNVGIFTGSNNPVFKSFVTNQFTGTVNPEIFQTARLSASSLRYYGLGLENGFYNITLQFAETAILDSTTWKSLGRRVFDIYIQGTRVLKDFDIQKQAGGVSYRAVQKQFRFEVKENYVEIHLYWAGKGTCCIPGQGTYGPLIQAISATPDFIPTVSNKPPSSKKNRAGLIIGVVVGVGVVCFLSIFAIFCIIRRRKRYDDDDELLGIDTMPNTFSYYELKNATSDFNRDNKLGEGGFGPVYKGTLNDGRDVAVKQLSIGSHQGKSQFVAEIATISAVQHRNLVKLYGCCIEGSKRLLVYEYLENKSLDQALFGNVLFLNWPTRYDICMGVARGLTYLHEESRLRIVHRDVKASNILLDSELIPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFSFGVVALELVSGRPNSDSSLEGEKMYLLEWAWQLHERGCTNDLIDPRLSEFNKEEVQRLVGIALLCTQTSPTLRPPMSRVVAMLSGDIEVSAVTARPGYLTDWKFDDVSSIMTDISLKGLDTSNYNSTASTSIAVGADQNSPNDPSKSILHDTLREGR 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00387 1036 Gene3D Ribonuclease Inhibitor 282 404 IPR032675 -
Vivi7g00387 1036 Pfam Protein tyrosine and serine/threonine kinase 698 961 IPR001245 GO:0004672|GO:0006468
Vivi7g00387 1036 ProSitePatterns Serine/Threonine protein kinases active-site signature. 814 826 IPR008271 GO:0004672|GO:0006468
Vivi7g00387 1036 FunFam Leucine-rich repeat transmembrane protein kinase 39 280 - -
Vivi7g00387 1036 Gene3D Phosphorylase Kinase; domain 1 668 770 - -
Vivi7g00387 1036 ProSiteProfiles Leucine-rich repeat profile. 317 339 IPR001611 GO:0005515
Vivi7g00387 1036 SUPERFAMILY L domain-like 92 397 - -
Vivi7g00387 1036 Gene3D Ribonuclease Inhibitor 38 281 IPR032675 -
Vivi7g00387 1036 SUPERFAMILY Protein kinase-like (PK-like) 678 978 IPR011009 -
Vivi7g00387 1036 FunFam Putative LRR receptor-like serine/threonine-protein kinase 771 974 - -
Vivi7g00387 1036 Pfam Leucine rich repeat 293 352 IPR001611 GO:0005515
Vivi7g00387 1036 FunFam Leucine-rich repeat receptor-like protein kinase 427 618 - -
Vivi7g00387 1036 FunFam Leucine-rich repeat receptor-like protein kinase 664 770 - -
Vivi7g00387 1036 MobiDBLite consensus disorder prediction 1012 1026 - -
Vivi7g00387 1036 MobiDBLite consensus disorder prediction 1012 1036 - -
Vivi7g00387 1036 CDD STKc_IRAK 701 962 - -
Vivi7g00387 1036 Gene3D Transferase(Phosphotransferase) domain 1 771 972 - -
Vivi7g00387 1036 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 18 988 - -
Vivi7g00387 1036 ProSiteProfiles Protein kinase domain profile. 695 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00387 1036 SMART serkin_6 695 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00387 1036 Gene3D - 429 618 - -
Vivi7g00387 1036 FunFam Putative LRR receptor-like serine/threonine-protein kinase 281 404 - -
Vivi7g00387 1036 Pfam Malectin domain 429 614 IPR021720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00387 Vivi-Chr7 22593076 22601700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00387 107 280 Receptor kinase-like Gene Family AT1G56120 26.437 7.34e-11 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi7g00387 PK_Tyr_Ser-Thr 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00387 - - mtr:25502389 1653.65