Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00302 ATGGGTCGCCCTCCCAGTAACGGAGGCCCCGCCTTCCGCTTCACCCAGCCGGAGGTAACAGAAATGGAAGCTATTCTTTCAGAACACAACAATGCAATGCCAGCACGAGATGTTCTTCAGGCTCTTGCAGACAAGTTCAGCGAATCACCTGACCGTAAAGGCAAAATTACCGTACAGAATAAACAGGTATGGAATTGGTTTCAAAATAAGCGATATGCGATAAGGGCTAAAACTAGTAAGACTCCTGCAAAGTTAAATATCACACCCATGCCTCGGGTTGATTTGGCCCCAGGAAGGATTATGGCTCAACCAACAGCTTCTCCGATTCCCGCTCCTTCAGCTTCAGTTCAAGGAACAGCAAAATTAGCTCCTGAAAATTCAGTTATGGAATTTGAAGCTAAATCTGGAAGGGATGGAGCATGGTATGATGTGGCTAACTTTCTATCATACAGACATTTGGAGAGCAGTGATCCGGAAGTGCTAGTGCGCTTTTCCGGTTTTGGATCTGATGAAGATGAGTGGATTAATGTACGAAAGAATGTCAGGCCACGCTCTCTGCCATGTGAGTCTTCAGAATGTGTCGCAGTGCTCGCTGGAGATCTCATACTTTGTTTTCAGGAAGGTAAAGAACAAGCCCTTTACTTTGATGCACATGTCCTTGATGCTCAAAGACGGAGGCACGACGTAAGAGGTTGTCGTTGTAGATTTTTGGTTCGCTATGATCATGATCAGTCTGAGGAAATCGTGACGCTTAGGAAGGTTTGTCGGAGGCCTGAAACGGATTACAGATTACATCAACTTCATGCCGTGAATGATGCACCACCTGTGGATCATCAGAAGATTAGCTTGGATCATCCAGCAAATGTTCATAGCATGAGGGTTACTAATTCTTCTGAAATGGTGCAAAAGCAGCAACAGATTGCAAATATTCATATAGTAACACCAGTTTTGCAAACAAACGTTTCCATTCCACCACAAAGTATGAATGTGGATCCAGTGAAAATTGAAACAAAACCTGATATTCAAGCTGGAAATCCTATCACTCTAGGCACCGCCACATTCAACCCCAGCGTCATTACTACTAGCAGTGTTCCGGAAGTTTCGACTCAGAACCTGCCCGAAGAGAAGTAA 1131 0.4465 MGRPPSNGGPAFRFTQPEVTEMEAILSEHNNAMPARDVLQALADKFSESPDRKGKITVQNKQVWNWFQNKRYAIRAKTSKTPAKLNITPMPRVDLAPGRIMAQPTASPIPAPSASVQGTAKLAPENSVMEFEAKSGRDGAWYDVANFLSYRHLESSDPEVLVRFSGFGSDEDEWINVRKNVRPRSLPCESSECVAVLAGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFLVRYDHDQSEEIVTLRKVCRRPETDYRLHQLHAVNDAPPVDHQKISLDHPANVHSMRVTNSSEMVQKQQQIANIHIVTPVLQTNVSIPPQSMNVDPVKIETKPDIQAGNPITLGTATFNPSVITTSSVPEVSTQNLPEEK 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00302 376 Gene3D - 10 86 - -
Vivi7g00302 376 Gene3D - 126 187 - -
Vivi7g00302 376 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
Vivi7g00302 376 Gene3D - 188 260 - -
Vivi7g00302 376 SUPERFAMILY Homeodomain-like 12 77 IPR009057 -
Vivi7g00302 376 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 323 IPR039276 -
Vivi7g00302 376 CDD homeodomain 13 75 IPR001356 GO:0003677
Vivi7g00302 376 SMART HOX_1 7 81 IPR001356 GO:0003677
Vivi7g00302 376 Pfam SAWADEE domain 129 255 IPR032001 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00302 Vivi-Chr7 17392927 17399013 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Vivi7g00302 SAWADEE 8.9e-40 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00302 - - gmx:100783895 528.865