Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00290 ATGGACTACTACAACATACTGAAAGTGAGTCGAAGCGCAACCGACATTGATGTGAAGAAATCATACAAAAAGCTTGCTATGGTATGGCACCCTGACAAAAACCCTAATAACAGAGCCCAAGCCGAGTCCAAATTCAAGCTCATTTCTGAAGCCTACGATGTTCTAACCGATCCTCACAAGCGTAGGATCTACGATAATTACGGCGAGGTAGCGCTCAAGTCTGGTGTTGTCCCACCACCACCACCTCAGAACCATTCTCATTATCCATATGCATCTTCTTCGTCTTCTTTTTCCTCATCACGCCAGAACTATGCCTCCTATCGTTATAATCCTCGCACTCCACTTGATATTTATACTGAGATCTTTGGTCATGATGGTATGGAAACCGGTGGCTCTCGGAGGACTTCGACTGGTGGACATCCGATGAAGAAAGCTCCTCCTATTGAGCGTTCCTTGCTTTGCAGTCTGGAAGATCTGTATGCAGGGGTTGACAAGAAGATGAAGATTACCAGAACTATAACTGGTCATGATGGGAAGAGCCGTATTGAGGAGGAGATTCTGACTATTAATATAAAACCTGGCTGGAAGAAGGGGACAAAGATTACCTTCGCTGAAAAGGGTGACCAAGAGCCTGGCATCATCCCAGCAGATATCATTTTTGTAATTGAGGAGAAACCACATGCTTGTTATATAAGGAATGGCAATGATCTGATAGTTAACCAAGAGATGACTCTGGTCGACGCCCTTACAAATAAATTATTGGAAATCCGTACCTTGGATGGGAGGCAACTCATGGTCCGGTTGTCAGGTATAGTTACACCTGGCTATGTGCACGTAGTACCTAGCGAAGGAATGCCATTATCCAAAGAACCTGGAAAGAAGGGAAATTTAAAAATTAAGATTATTGACATCAAGTATCCGTCGAGTCTAACTCCTAGGCAAAAATCTGATCTGAGGGGAGTCTTGAGTTGA 972 0.4393 MDYYNILKVSRSATDIDVKKSYKKLAMVWHPDKNPNNRAQAESKFKLISEAYDVLTDPHKRRIYDNYGEVALKSGVVPPPPPQNHSHYPYASSSSSFSSSRQNYASYRYNPRTPLDIYTEIFGHDGMETGGSRRTSTGGHPMKKAPPIERSLLCSLEDLYAGVDKKMKITRTITGHDGKSRIEEEILTINIKPGWKKGTKITFAEKGDQEPGIIPADIIFVIEEKPHACYIRNGNDLIVNQEMTLVDALTNKLLEIRTLDGRQLMVRLSGIVTPGYVHVVPSEGMPLSKEPGKKGNLKIKIIDIKYPSSLTPRQKSDLRGVLS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00290 323 MobiDBLite consensus disorder prediction 126 145 - -
Vivi7g00290 323 SUPERFAMILY Chaperone J-domain 1 78 IPR036869 -
Vivi7g00290 323 SMART dnaj_3 1 60 IPR001623 -
Vivi7g00290 323 ProSitePatterns Nt-dnaJ domain signature. 45 64 IPR018253 -
Vivi7g00290 323 PRINTS DnaJ domain signature 4 22 IPR001623 -
Vivi7g00290 323 PRINTS DnaJ domain signature 60 79 IPR001623 -
Vivi7g00290 323 PRINTS DnaJ domain signature 22 37 IPR001623 -
Vivi7g00290 323 PRINTS DnaJ domain signature 40 60 IPR001623 -
Vivi7g00290 323 ProSiteProfiles dnaJ domain profile. 2 68 IPR001623 -
Vivi7g00290 323 FunFam Dnaj homolog subfamily b member 144 225 - -
Vivi7g00290 323 Pfam DnaJ domain 2 65 IPR001623 -
Vivi7g00290 323 CDD DnaJ_C 146 310 - -
Vivi7g00290 323 Gene3D - 145 226 - -
Vivi7g00290 323 Gene3D DnaJ domain 1 134 IPR036869 -
Vivi7g00290 323 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 322 - -
Vivi7g00290 323 MobiDBLite consensus disorder prediction 77 97 - -
Vivi7g00290 323 CDD DnaJ 2 57 IPR001623 -
Vivi7g00290 323 SUPERFAMILY HSP40/DnaJ peptide-binding domain 231 316 IPR008971 GO:0006457|GO:0051082
Vivi7g00290 323 FunFam DnaJ subfamily B member 13 227 308 - -
Vivi7g00290 323 Pfam DnaJ C terminal domain 149 301 IPR002939 -
Vivi7g00290 323 SUPERFAMILY HSP40/DnaJ peptide-binding domain 147 227 IPR008971 GO:0006457|GO:0051082
Vivi7g00290 323 Gene3D - 227 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00290 Vivi-Chr7 17114779 17118053 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00290 2 65 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 36.765 5.03e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00290 K09510 - qsa:O6P43_022791 384.8