Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00277 ATGAAGAAGGTAATCAAGGAGCTTTTGAAAGTATATAGATTGGTGCATGCTTTGATTTTAATATATGCCTGGATGTCTCAAAGTCATTGGAAGGTGGGTTTATTTTTCTTGATTTCCTTCACTACAATGGAAAGGGAATCATATGGAGAAGATATAGCTGATACAGAAACGGAGAGATCTGATCACAGTGACGAAGACGACGACGATGATAGTTTTATTGATGATGACGATGATACAGTTTTCCCACCATCTCCTATTTTCAATGAAGAGGAAGCTTCTTCTGATAGCGGTCTAAAAGTTACAAAAGGAAGCCGAAGAAGGCTGAGGAAGAAGTACCAGTTGGTAGAGTCAGACGACGATGGCGGTTGTGAAGAAAAGAAAACTATTGATGACAACATGCATGTTGAATCTCAGGAAATTGATGACGAAGATAGTCTACCAATTTCATCTATTTGCAAGAATAAAGCCTCTGTAAGGGTCTTGGATCAGGAAATGGATGATAATGTTGATAAAGAAACAGTTGGTGCTGGCAACGAAGATGGTGAAGACCGAGAGGATAATACTATTGAAACAACGTTGAAAACTGACAATGTTGTCCTGGACAGTCAGACTCATAGCAGGGAAGCTGAACCTTCAGATCAATTGGTAGATCCCTGCCCTGTTCTGGATGTTGGGGATATTAAAAAGTCAAAAAAGAAAAAGAAGGAAAAGGAAAAAGAAACAAAGAGTTCTTGTAATGACCATTCTACCGAACTAGATAATGCTGTGCGAGATGAGCCAAAAATGAACACAACTCAGGATCTTCTGGCAGAAAATGAACAGAACCAACAGCAAGCTGATGATAGCAGGAAAGCTGAACCTTCAGATCAATTGGTAGATCCTTGCACTGTTCTGGATGTTGGGGATATTAAAAAGTCAAAAAAGAAAAAGAAGGAAGAGGAAAAAGAAACAAAGAATTCAATTAATGGCCATTCCACCGAATTAGGTAATGCTGTGCAAGATGAGCCAAAAATGAACATGACTCAGGATCTTCTGGCAGGAAATGAACAGAACCAGCAGCAAGCTGATGATAAGAAAGTTGAAACCACGGATAAAATACTACCTTCCTCACAGGTTGGTCAGGGACAGGATGAAAAACCAAAGAGAAAAAGGAAGGAACGGTCCAAGGATGAGACACTTCTTACTGCTGGTGGTGCTTGTATTAGCAATGTTACTAACCTGCCTCCGGGAAATGAACACAATAGTCAGGACACAGTTAATGGCAGGGATGTTAAGATTTCAGACACTGTTGCAATGCCTTTCACTGAAACGGATTCTCAAAAGAAAACAAAGAAGAGAAAGAAAGAGCATTTAAACAAAGTTTCACAGCCTGAAGGTGACAATGGAAATGGTGAAGCCAACAAAGAGACAGTAGAGTCTGATTGTCTGATTGATAAGTTTTCTGAAAGGAAAGAGCAACATCCAAAGCTTACAATTGAAAACAATGTGGACAACAATGGAAACCAATCTGAAGACAAGAAAGTTAAGAAAAAGAAGAAAAGTAAAAGCAAAGGCAATGAAGTTGTAAATTCTGATGTGCCTTTATCCGTTGAGCCAAGTACTGAGATGACGAAAGAGGATGGAAATAATCCGGAGGATGCCAAGTCTTCCCAAGTCAGAACATTGTCAGATGGACTAGTTATTCAAGAGCTAGAGACCGGGAAAGCAAATGGGAAAATTGCTGCATTAGGGAAAAAGATCAGCATCAATTACACTGGCAAGTTGAAGGAAAATGGAATGGTGGTTGAGTCAAACGCTGGCGAAGCTCCTTTCAAATTTCGCCTTGGTAAAGGAGAAGTTATTAAGGGTTGGGATATTGGCCTTGAAGGTATGCAAGTTGGAGAAAAAAGAAGACTTGTGATACCACCGTCAATGACGTCTAAGAAAGATGGAGACAGTGGCAGTATACCACCAAATTCATGGTTGGTTTATGACTTCGAACTGGTTAAAGTTCATTGA 1998 0.3979 MKKVIKELLKVYRLVHALILIYAWMSQSHWKVGLFFLISFTTMERESYGEDIADTETERSDHSDEDDDDDSFIDDDDDTVFPPSPIFNEEEASSDSGLKVTKGSRRRLRKKYQLVESDDDGGCEEKKTIDDNMHVESQEIDDEDSLPISSICKNKASVRVLDQEMDDNVDKETVGAGNEDGEDREDNTIETTLKTDNVVLDSQTHSREAEPSDQLVDPCPVLDVGDIKKSKKKKKEKEKETKSSCNDHSTELDNAVRDEPKMNTTQDLLAENEQNQQQADDSRKAEPSDQLVDPCTVLDVGDIKKSKKKKKEEEKETKNSINGHSTELGNAVQDEPKMNMTQDLLAGNEQNQQQADDKKVETTDKILPSSQVGQGQDEKPKRKRKERSKDETLLTAGGACISNVTNLPPGNEHNSQDTVNGRDVKISDTVAMPFTETDSQKKTKKRKKEHLNKVSQPEGDNGNGEANKETVESDCLIDKFSERKEQHPKLTIENNVDNNGNQSEDKKVKKKKKSKSKGNEVVNSDVPLSVEPSTEMTKEDGNNPEDAKSSQVRTLSDGLVIQELETGKANGKIAALGKKISINYTGKLKENGMVVESNAGEAPFKFRLGKGEVIKGWDIGLEGMQVGEKRRLVIPPSMTSKKDGDSGSIPPNSWLVYDFELVKVH 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00277 665 MobiDBLite consensus disorder prediction 520 537 - -
Vivi7g00277 665 MobiDBLite consensus disorder prediction 110 141 - -
Vivi7g00277 665 MobiDBLite consensus disorder prediction 376 392 - -
Vivi7g00277 665 MobiDBLite consensus disorder prediction 162 191 - -
Vivi7g00277 665 MobiDBLite consensus disorder prediction 162 553 - -
Vivi7g00277 665 MobiDBLite consensus disorder prediction 398 423 - -
Vivi7g00277 665 MobiDBLite consensus disorder prediction 300 321 - -
Vivi7g00277 665 MobiDBLite consensus disorder prediction 465 491 - -
Vivi7g00277 665 MobiDBLite consensus disorder prediction 49 148 - -
Vivi7g00277 665 Gene3D - 529 665 IPR046357 GO:0003755
Vivi7g00277 665 MobiDBLite consensus disorder prediction 60 77 - -
Vivi7g00277 665 MobiDBLite consensus disorder prediction 224 260 - -
Vivi7g00277 665 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 255 664 - -
Vivi7g00277 665 MobiDBLite consensus disorder prediction 261 276 - -
Vivi7g00277 665 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 577 665 IPR001179 GO:0003755
Vivi7g00277 665 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 574 662 IPR001179 GO:0003755
Vivi7g00277 665 SUPERFAMILY FKBP-like 541 664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00277 Vivi-Chr7 15922406 15930344 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00277 577 662 Calmodulin-binding Proteins AT5G48570 40.698 5.12e-15 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00277 K14826 - gmx:100798135 272.322