Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00274 ATGGCATTTTGGGGAGTTGAAATCAAACCTGGAAAGCCTTTCACGCACCTATACGATGCTTCCCGAGGACGCCTCCACATTTCAATGGCCACTTTGGGGCTTGGCACAGCAATTACGAAAAGCACACTGCAATGTAATGTGGGAAACAAAAGCCCTGTTTTTCTTTGTGCTCTTTATCCTGGAAAAAGTGAGTCGTTGCAGTTGAATTTGGAGTTTGAAGAAGATGGTAATGTTGTTCTCTCCGTCATTGGCCCTCGGAGTATTCATCTCTGCGGTTATTATCTTGCCCGTGGACACTATACCAATACTATGGATGAATCGGAATCATATGGAGAAGATATAGCTGATACAGAAACGGAGAGATCTGATCACAGTGACGAAGACGACGACGATGATAGTTTTATTGATGATGACGATGATACAGTTTTCCCACCATCTCCTATTTTCAATGAAGAGGAAGCTTCTTCTGATAGCGGTCTAAAAGTTACAAAAGGAAGCCGAAGAAGGCTGAGGAAGAAGTACCAGTTGGTAGAGTCAGACGACGATGGCGGTTGTGAAGAAAAGAAAACTATTGATGACAACATGCATGTTGAATCTCAGGAAATTGATGACGAAGATAGTCTACCAATTTCATCTATTTGCAAGAATAAAGCCTCTGTAAGGGTCTTGGATCAGGAAATGGATGATAATGTTGATAAAGAAACAGTTGGTGCTGGCAACGAAGATGGTGAAGACCGAGAGGATAATACTATTGAAACAACGTTGAAAACTGACAATGTTGTCCTGGACAGTCAGACTCATAGGGAAGCTGAACCTTCAGATCAATTGGTAGATCCCTGCCCTGTTCTGGATGTTGGGGATATTAAAAAGTCAAAAAAGAAAAAGAAGGAAAAGGAAAAAGAAACAAAGAGTTCTTGTAATGACCATTCTACCGAACTAGATAATGCTGTGCGAGATGAGCCAAAAATGAACACAACTCAGGATCTTCTGGCAGAAAATGAACAGAACCAACAGCAAGCTGATGATAGCAGGAAAGCTGAACCTTCAGATCAATTGGTAGATCCTTGCACTGTTCTGGATGTTGGGGATATTAAAAAGTCAAAAAAGAAAAAGAAGGAAGAGGAAAAAGAAACAAAGAATTCAATTAATGGCCATTCCACCGAATTAGGTAATGCTGTGCAAGATGAGCCAAAAATGAACATGACTCAGGATCTTCTGGCAGGAAATGAACAGAACCAGCAGCAAGCTGATGATAAGAAAGTTGAAACCACGGATAAAATACTACCTTCCTCACAGGTTGGTCAGGGACAGGATGAAAAACCAAAGAGAAAAAGGAAGGAACGGTCCAAGGATGAGACACTTCTTACTGCTGGTGGTGCTTGTATTAGCAATGTTACTAACCTGCCTCCGGGAAATGAACACAATAGTCAGGACACAGTTAATGGCAGGGATGTTAAGATTTCAGACACTGTTGCAATGCCTTTCACTGAAACGGATTCTCAAAAGAAAACAAAGAAGAGAAAGAAAGAGCATTTAAACAAAGTTTCACAGCCTGAAGGTGACAATGGAAATGGTGAAGCCAACAAAGAGACAGTAGAGTCTGATTGTCTGATTGATAAGTTTTCTGAAAGGAAAGAGCAACATCCAAAGCTTACAATTGAAAACAATGTGGACAACAATGGAAACCAATCTGAAGACAAGAAAGTTAAGAAAAAGAAGAAAAGTAAAAGCAAAGGCAATGAAGTTGTAAATTCTGATGTGCCTTTATCCGTTGAGCCAAGTACTGAGATGACGAAAGAGGATGGAAATAATCCGGAGGATGCCAAGTCTTCCCAAGTCAGAACATTGTCAGATGGACTAGTTATTCAAGAGCTAGAGACCGGGAAAGCAAATGGGAAAATTGCTGCATTAGGGAAAAAGATCAGCATCAATTACACTGGCAAGTTGAAGGAAAATGGAATGGTGGTTGAGTCAAACGCTGGCGAAGCTCCTTTCAAATTTCGCCTTGGTAAAGGAGAAGTTATTAAGGGTTGGGATATTGGCCTTGAAGGTATGCAAGTTGGAGAAAAAAGAAGACTTGTGATACCACCGTCAATGACGTCTAAGAAAGATGGAGACAGTGGCAGTATACCACCAAATTCATGGTTGGTTTATGACTTCGAACTGGTTAAAGTTCATTGA 2181 0.4081 MAFWGVEIKPGKPFTHLYDASRGRLHISMATLGLGTAITKSTLQCNVGNKSPVFLCALYPGKSESLQLNLEFEEDGNVVLSVIGPRSIHLCGYYLARGHYTNTMDESESYGEDIADTETERSDHSDEDDDDDSFIDDDDDTVFPPSPIFNEEEASSDSGLKVTKGSRRRLRKKYQLVESDDDGGCEEKKTIDDNMHVESQEIDDEDSLPISSICKNKASVRVLDQEMDDNVDKETVGAGNEDGEDREDNTIETTLKTDNVVLDSQTHREAEPSDQLVDPCPVLDVGDIKKSKKKKKEKEKETKSSCNDHSTELDNAVRDEPKMNTTQDLLAENEQNQQQADDSRKAEPSDQLVDPCTVLDVGDIKKSKKKKKEEEKETKNSINGHSTELGNAVQDEPKMNMTQDLLAGNEQNQQQADDKKVETTDKILPSSQVGQGQDEKPKRKRKERSKDETLLTAGGACISNVTNLPPGNEHNSQDTVNGRDVKISDTVAMPFTETDSQKKTKKRKKEHLNKVSQPEGDNGNGEANKETVESDCLIDKFSERKEQHPKLTIENNVDNNGNQSEDKKVKKKKKSKSKGNEVVNSDVPLSVEPSTEMTKEDGNNPEDAKSSQVRTLSDGLVIQELETGKANGKIAALGKKISINYTGKLKENGMVVESNAGEAPFKFRLGKGEVIKGWDIGLEGMQVGEKRRLVIPPSMTSKKDGDSGSIPPNSWLVYDFELVKVH 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00274 726 Gene3D - 590 726 IPR046357 GO:0003755
Vivi7g00274 726 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 41 422 - -
Vivi7g00274 726 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 638 726 IPR001179 GO:0003755
Vivi7g00274 726 MobiDBLite consensus disorder prediction 105 210 - -
Vivi7g00274 726 MobiDBLite consensus disorder prediction 581 598 - -
Vivi7g00274 726 Pfam Nucleoplasmin-like domain 3 95 IPR041232 -
Vivi7g00274 726 MobiDBLite consensus disorder prediction 122 139 - -
Vivi7g00274 726 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 635 723 IPR001179 GO:0003755
Vivi7g00274 726 MobiDBLite consensus disorder prediction 224 614 - -
Vivi7g00274 726 MobiDBLite consensus disorder prediction 285 321 - -
Vivi7g00274 726 MobiDBLite consensus disorder prediction 322 337 - -
Vivi7g00274 726 SUPERFAMILY FKBP-like 602 725 - -
Vivi7g00274 726 MobiDBLite consensus disorder prediction 437 453 - -
Vivi7g00274 726 MobiDBLite consensus disorder prediction 361 382 - -
Vivi7g00274 726 MobiDBLite consensus disorder prediction 459 484 - -
Vivi7g00274 726 MobiDBLite consensus disorder prediction 172 203 - -
Vivi7g00274 726 MobiDBLite consensus disorder prediction 526 552 - -
Vivi7g00274 726 Gene3D Nucleoplasmin core domain 1 99 - -
Vivi7g00274 726 MobiDBLite consensus disorder prediction 224 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00274 Vivi-Chr7 15922406 15931577 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00274 638 723 Calmodulin-binding Proteins AT5G48570 40.698 9.97e-15 75.9