Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00273 ATGGCATTTTGGGGAGTTGAAATCAAACCTGGAAAGCCTTTCACGCACCTATACGATGCTTCCCGAGGACGCCTCCACATTTCAATGGCCACTTTGGGGCTTGGCACAGCAATTACGAAAAGCACACTGCAATGTAATGTGGGAAACAAAAGCCCTGTTTTTCTTTGTGCTCTTTATCCTGGAAAAAGTGAGTCGTTGCAGTTGAATTTGGAGTTTGAAGAAGATGGTAATGTTGTTCTCTCCGTCATTGGCCCTCGGAGTATTCATCTCTGCGGTTATTATCTTGCCCGTGGACACTATACCAATACTATGGATGAATCGGAATCATATGGAGAAGATATAGCTGATACAGAAACGGAGAGATCTGATCACAGTGACGAAGACGACGACGATGATAGTTTTATTGATGATGACGATGATACAGTTTTCCCACCATCTCCTATTTTCAATGAAGAGGAAGCTTCTTCTGATAGCGGTCTAAAAGTTACAAAAGGAAGCCGAAGAAGGCTGAGGAAGAAGTACCAGTTGGTAGAGTCAGACGACGATGGCGGTTGTGAAGAAAAGAAAACTATTGATGACAACATGCATGTTGAATCTCAGGAAATTGATGACGAAGATAGTCTACCAATTTCATCTATTTGCAAGAATAAAGCCTCTGTAAGGGTCTTGGATCAGGAAATGGATGATAATGTTGATAAAGAAACAGTTGGTGCTGGCAACGAAGATGGTGAAGACCGAGAGGATAATACTATTGAAACAACGTTGAAAACTGACAATGTTGTCCTGGACAGTCAGACTCATAGCAGGGAAGCTGAACCTTCAGATCAATTGGTAGATCCCTGCCCTGTTCTGGATGTTGGGGATATTAAAAAGTCAAAAAAGAAAAAGAAGGAAAAGGAAAAAGAAACAAAGAGTTCTTGTAATGACCATTCTACCGAACTAGATAATGCTGTGCGAGATGAGCCAAAAATGAACACAACTCAGGATCTTCTGGCAGAAAATGAACAGAACCAACAGCAAGCTGATGATAGCAGGAAAGCTGAACCTTCAGATCAATTGGTAGATCCTTGCACTGTTCTGGATGTTGGGGATATTAAAAAGTCAAAAAAGAAAAAGAAGGAAGAGGAAAAAGAAACAAAGAATTCAATTAATGGCCATTCCACCGAATTAGGTAATGCTGTGCAAGATGAGCCAAAAATGAACATGACTCAGGATCTTCTGGCAGGAAATGAACAGAACCAGCAGCAAGCTGATGATAAGAAAGTTGAAACCACGGATAAAATACTACCTTCCTCACAGGTTGGTCAGGGACAGGATGAAAAACCAAAGAGAAAAAGGAAGGAACGGTCCAAGGATGAGACACTTCTTACTGCTGGTGGTGCTTGTATTAGCAATGTTACTAACCTGCCTCCGGGAAATGAACACAATAGTCAGGACACAGTTAATGGCAGGGATGTTAAGATTTCAGACACTGTTGCAATGCCTTTCACTGAAACGGATTCTCAAAAGAAAACAAAGAAGAGAAAGAAAGAGCATTTAAACAAAGTTTCACAGCCTGAAGGTGACAATGGAAATGGTGAAGCCAACAAAGAGACAGTAGAGTCTGATTGTCTGATTGATAAGTTTTCTGAAAGGAAAGAGCAACATCCAAAGCTTACAATTGAAAACAATGTGGACAACAATGGAAACCAATCTGAAGACAAGAAAGTTAAGAAAAAGAAGAAAAGTAAAAGCAAAGGCAATGAAGTTGTAAATTCTGATGTGCCTTTATCCGTTGAGCCAAGTACTGAGATGACGAAAGAGGATGGAAATAATCCGGAGGATGCCAAGTCTTCCCAAGTCAGAACATTGTCAGATGGACTAGTTATTCAAGAGCTAGAGACCGGGAAAGCAAATGGGAAAATTGCTGCATTAGGGAAAAAGATCAGCATCAATTACACTGGCAAGTTGAAGGAAAATGGAATGGTGGTTGAGTCAAACGCTGGCGAAGCTCCTTTCAAATTTCGCCTTGGTAAAGGAGAAGTTATTAAGGGTTGGGATATTGGCCTTGAAGGTATGCAAGTTGGAGAAAAAAGAAGACTTGTGATACCACCGTCAATGACGTCTAAGAAAGATGGAGACAGTGGCAGTATACCACCAAATTCATGGTTGGTTTATGACTTCGAACTGGTTAAAGTTCATTGA 2184 0.4084 MAFWGVEIKPGKPFTHLYDASRGRLHISMATLGLGTAITKSTLQCNVGNKSPVFLCALYPGKSESLQLNLEFEEDGNVVLSVIGPRSIHLCGYYLARGHYTNTMDESESYGEDIADTETERSDHSDEDDDDDSFIDDDDDTVFPPSPIFNEEEASSDSGLKVTKGSRRRLRKKYQLVESDDDGGCEEKKTIDDNMHVESQEIDDEDSLPISSICKNKASVRVLDQEMDDNVDKETVGAGNEDGEDREDNTIETTLKTDNVVLDSQTHSREAEPSDQLVDPCPVLDVGDIKKSKKKKKEKEKETKSSCNDHSTELDNAVRDEPKMNTTQDLLAENEQNQQQADDSRKAEPSDQLVDPCTVLDVGDIKKSKKKKKEEEKETKNSINGHSTELGNAVQDEPKMNMTQDLLAGNEQNQQQADDKKVETTDKILPSSQVGQGQDEKPKRKRKERSKDETLLTAGGACISNVTNLPPGNEHNSQDTVNGRDVKISDTVAMPFTETDSQKKTKKRKKEHLNKVSQPEGDNGNGEANKETVESDCLIDKFSERKEQHPKLTIENNVDNNGNQSEDKKVKKKKKSKSKGNEVVNSDVPLSVEPSTEMTKEDGNNPEDAKSSQVRTLSDGLVIQELETGKANGKIAALGKKISINYTGKLKENGMVVESNAGEAPFKFRLGKGEVIKGWDIGLEGMQVGEKRRLVIPPSMTSKKDGDSGSIPPNSWLVYDFELVKVH 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00273 727 MobiDBLite consensus disorder prediction 286 322 - -
Vivi7g00273 727 MobiDBLite consensus disorder prediction 105 210 - -
Vivi7g00273 727 Pfam Nucleoplasmin-like domain 3 95 IPR041232 -
Vivi7g00273 727 MobiDBLite consensus disorder prediction 122 139 - -
Vivi7g00273 727 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 636 724 IPR001179 GO:0003755
Vivi7g00273 727 SUPERFAMILY FKBP-like 603 726 - -
Vivi7g00273 727 MobiDBLite consensus disorder prediction 527 553 - -
Vivi7g00273 727 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 639 727 IPR001179 GO:0003755
Vivi7g00273 727 MobiDBLite consensus disorder prediction 323 338 - -
Vivi7g00273 727 MobiDBLite consensus disorder prediction 172 203 - -
Vivi7g00273 727 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 41 423 - -
Vivi7g00273 727 Gene3D Nucleoplasmin core domain 1 99 - -
Vivi7g00273 727 MobiDBLite consensus disorder prediction 438 454 - -
Vivi7g00273 727 MobiDBLite consensus disorder prediction 224 615 - -
Vivi7g00273 727 MobiDBLite consensus disorder prediction 224 253 - -
Vivi7g00273 727 Gene3D - 591 727 IPR046357 GO:0003755
Vivi7g00273 727 MobiDBLite consensus disorder prediction 362 383 - -
Vivi7g00273 727 MobiDBLite consensus disorder prediction 460 485 - -
Vivi7g00273 727 MobiDBLite consensus disorder prediction 582 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00273 Vivi-Chr7 15922406 15931578 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00273 639 724 Calmodulin-binding Proteins AT5G48570 40.698 9.91e-15 75.9