Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00243 ATGGAGCAAAAGATGCAAGACATTGAGGCTCAGACTATTGTGCAGAAGGAAGCATCTAAGATCTTCCACAAGGGAAATACTCCAGTAACTTTGAAGTTTCATGATGTTGTATACAAAGCAAAGGCCACAAAGAAAGAACAGAAAGTAATACTGAGTGGAGTGACAGGCATGGTTCAAGCTGGTGAGATTCTTGCCATTTTAGGTCCATCTGGAAGTGGCAAAACAACTCTGCTAACAGCATTAGGAGGAAGACTTGGAGGGAAACTTTCTGGAACCATAACTTACAATGGAAAACTCTTTTCAAATTCAATGAAAAAGAGCATTGGATTTGTTACACAAGAGGATATTCTCTATGCTCACTTGACAGTCACAGAAACTTTAGTGTTTACTTCTCTTCTAAGATTACCTAGTAGTTTCACAAAACAGGAGAAAATTGAGCATGCAAAATCTGTTCTTTCTCTACTTGGTTTAACAAAATGCAAAGATAGCATAATTGGAAAACCAATGTTGAGAGGTGTTTCTGGTGGCGAGAGAAAACGGGTTAGTATTGGACAAGAGATGCTTATTAATCCAAGTTTGTTGTTTTTAGATGAACCTACTTCAGGGTTAGACTCAACAACAGCTCAGAAAATTGTGTCAAATTTATGGGAGCTTGCGATTGGTGGAAGAACTGTTGTGATGACAATACATCAACCTTCTAGTAGGATATATCATATGTTTCATACTGTGTTGCTTTTATCAGAAGGAATTCCTTTGTATTATGGAAAGGGTTCTGAAGCTATGGAATACTTGTCTGGTATTGGATATCAACCTGCAATTGCTATGAACCCTTCTGACTTCCTTCTAGATCTTGCAAATGGAGTTTACACAGATCAATCGAACGAGGATCATGCCTTAAATAAGCAGAAATTGATTTCTGCTTATAAGAGCTACTTTGATGCCAACTGGAAACCAATAATACTTGATGAAAATATGGACAAGGATGAAAGCCAGAGTAGATTGGAAGATAGCGGCTTTGGGAAATGGTCTACCACTTGGTGGCAGCAATTCACTGTTCTGCTAAAAAGAGACTTAAAAGAGAGAAAACATGAACCATTCTCTGCCTTAAGAATCTGTAAGGTCATTGTGATTGCCCTTATTACAGGACTACTTTGGTATAGGTCCAATATTTCACAACTGGAGGATCAGATTGGGCTTCTATTTTTCATTAATAGTTTCTGGGCTGTGTTGCCATTCTACAAAGCAATATTCACTTTCCCTCAAGAGGCAACTATGTTGAAGAAAGAAAGATCTTCTGGAATGTATAGGCTTTCATCATACTTCATCTCAAGGATCATAGTTGACCTTCCAGTGGAGCTTATCCTTCCAACTATATACCTTATCATAATATATTTTATGACAGGGTTGAAACTTAATGTGATCAACTTCATATACACTTTGTTTAGCCTCTTACTCGATGTTTTAGTTTCACAAGGACTAGGCCTTGCCATTGGTGCTATTATTATGGAAACAAAATCAGCAATCACACTTGGTTCAATCATCTTGCTTAGTTTTGTGCTGGCGGTTGGATTCTATGTTCGACATGTTCCAAGTTTTATAGCATGGATTAAGTACATTTCCATCAACTACTACATATACAAGCTGTTTTTAGGATCTCAGTATGACATTAATGAAACGTACCCGTGTTCTGATGGGAAGTGTTTGATTTCAGAGTTTCCATTGGTAAAGCAAATGGGAGAATTACAATTGCAAGGGCAGCTCATGGCTTTGTTGGCTCTATTCATAATGCTAATAGCCTATAGACTTATGGCTTATTTTGCTCTTATGAGAATTGGGGTGACAAAGAAGATTTCTATCTGA 1860 0.3758 MEQKMQDIEAQTIVQKEASKIFHKGNTPVTLKFHDVVYKAKATKKEQKVILSGVTGMVQAGEILAILGPSGSGKTTLLTALGGRLGGKLSGTITYNGKLFSNSMKKSIGFVTQEDILYAHLTVTETLVFTSLLRLPSSFTKQEKIEHAKSVLSLLGLTKCKDSIIGKPMLRGVSGGERKRVSIGQEMLINPSLLFLDEPTSGLDSTTAQKIVSNLWELAIGGRTVVMTIHQPSSRIYHMFHTVLLLSEGIPLYYGKGSEAMEYLSGIGYQPAIAMNPSDFLLDLANGVYTDQSNEDHALNKQKLISAYKSYFDANWKPIILDENMDKDESQSRLEDSGFGKWSTTWWQQFTVLLKRDLKERKHEPFSALRICKVIVIALITGLLWYRSNISQLEDQIGLLFFINSFWAVLPFYKAIFTFPQEATMLKKERSSGMYRLSSYFISRIIVDLPVELILPTIYLIIIYFMTGLKLNVINFIYTLFSLLLDVLVSQGLGLAIGAIIMETKSAITLGSIILLSFVLAVGFYVRHVPSFIAWIKYISINYYIYKLFLGSQYDINETYPCSDGKCLISEFPLVKQMGELQLQGQLMALLALFIMLIAYRLMAYFALMRIGVTKKISI 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00243 619 Gene3D - 30 267 IPR027417 -
Vivi7g00243 619 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 17 603 - -
Vivi7g00243 619 Pfam ABC-2 type transporter 230 298 IPR043926 GO:0140359
Vivi7g00243 619 CDD ABCG_EPDR 28 255 - -
Vivi7g00243 619 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 264 IPR027417 -
Vivi7g00243 619 Pfam ABC transporter 52 201 IPR003439 GO:0005524
Vivi7g00243 619 SMART AAA_5 60 251 IPR003593 GO:0016887
Vivi7g00243 619 FunFam ABC transporter G family member 22 38 267 - -
Vivi7g00243 619 Pfam ABC-2 type transporter 348 554 IPR013525 GO:0016020|GO:0140359
Vivi7g00243 619 ProSitePatterns ABC transporters family signature. 173 187 IPR017871 GO:0005524|GO:0016887
Vivi7g00243 619 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 31 273 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00243 Vivi-Chr7 14097537 14100032 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00243 29 249 Calmodulin-binding Proteins AT2G36910 25.551 3.14e-12 68.2