Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00213 ATGGCTAATTCATTTGGTTTCTTTTTGTTTCTGGTTTTGTTTTTTGGTGTTACAGTTTTGGTTCAAGCACAACAACAAACAGGTTTCATAAGCATTGATTGTGGCGGTTCAGAGAATTTAAACATAGATGATGTAACAAAAACAAAGTACAGTTCAGAAGGATCATACATACAAACAGGTGTTAACAGAAACATTTCTTCTGAATATGCATATCCAAACAATCCAACTCTACCATTACCATTCTCAAATCTCAGAAGTTTTCCTCAAGGAGACCAAAACTGTTACCGATTAACCACAGGAAGAAAAGGAAGTTTATATTTAATAAGAGCTTCTTTCTTGTATGGAAACTACGACGGGGAAAACAAATTACCCGAATTTGATCTCTATGTTGATGTAAATTTCTGGTCATCAGTGAAATTCAAGAATGCTTCAGAACAAGTTACATTGGAAATAATCAGCACGGCACAATCTGAAGAAACAAATGTTTGTCTTTTGAATACAGGAAAGGGAGTTCCGTTTATCTCAGGGTTGGAACTTAGACCGATTAGTACTCCTATTTACAACACTGAGTTTGGAGATTCTGCTTCACTTTTGCTTTTCAAAAGATGGGATATTGGTTCAATCAATGGAAGTGGTAGATATGAAGATGATGTTTATGATAGAATTTGGTTTCCTTTTAGTTCCTCTTCATGGAAATCTCTCAACAGTTCTGTAGATATTGATGTTAATGGAGATGGATATAGAGTACCATCTGAAGTTATGAGAACCTGTTCTACACCGAAGAATGAGAATGATTCTTTGGAGTTTTCTTGGACTTCAGATGATCCAAATACGAAATTTTATGTCTACCTTTACTTTACTGAAGTGGAGATACTTCAGGGATCTCAACTGAGAAAATTCAGTGTTTCTTGGAATGGTTCTCCTTTCAATACATCACTAGTACCAAAATACGGGCAAGCAACCACTCTTTTTAATTCAAAGTCATTGGTCGCACAAGAACATCGAATTTCGATACAGAAAACCGAAGATTCGACGCTTCCCCCTATTCTTAATGCAGTGGAGATTTATGTAGTTAGACAATTGGATGCACTTCCAACATTTGAACAAGATGTTGAAGCTATAAGGAGTGTAAAAGAATGTTATAGAGTTCAAAGAGATTGGGTTGCTGATCCATGTGAACCAAAGAACTACACTTGGGAAGGCTTAAAATGCAACTACAACACTTCACTTCCTCCAAGAATTATATCACTGAATCTGAGCAGAAGCAGTCTGAGTGGAATCATAGCCCCTGCCATTTCCAATTTGACTTTCTTAGAATCATTGGATTTATCAAACAATAGCTTATCTGGACCAATGCCTCGGTTTTTGGAGGAATTGAGATTCCTTAAATATTTGAATTTAAGGGGCAACCAACTTTCAGGTTTTGTTTCTACCACTCTCCTAGAAAGATCAAAGAAGGGATTACTTACTTTGAGGGTGGATGATAAAAATTTCTCTGGTTCAAGTAATAAAAAGAAGGTAATTGCTCCCATTGTTGCATCAATATCATCAGTTATAGTTCTGTCAGTCATTGCCATTCTCTATAGGAAGATTAGAAGAAGAAATGAACAATCAGAGGAGGAGACGAATATGCTCAACAAAAGTGTAGGAACTGTAGTATCAAAGAAGTTACAATACACTTATGCTGAGGTGTTGGCCATCACCAGCAACTTTCAATTGGTCATTGGGAGGGGAGGATTTGGAAGTGTTTATAGTGGTCAGATGAAAGATGGCCATAAAGTTGCAGTTAAGATGCTTTCCGCGTCTTCAGCTCAGGGCCCAAAGGAATTTCAAACTGAGGCTGAACTTTTGATGACTGTTCATCACAAAAATTTGGTATCCTTCATTGGCTATTGTGATGAAGGTGACAAGATGGCCCTCATATATGAGTACTTGGCTAACGGCAACCTAAAAGATAAACTCTCAGAAAAAAGTTCAAGTTGCTTGAGTTGGGAAAGGAGAATTCAGATAGCAATCGATGCTGCAGAGGGATTGGATTATCTGCACCATGGATGCAAGCCACCTATAATACACAGAGATGTAAAATCGGCTAATATTCTTCTAAGTGAAAACTTAGAAGCTAAGATAGCAGATTTTGGACTCTCTAAGGTGTTTAAGAATAGTGATAATGGAAATTCAGAATCTGCAATTATTTATGTTGATGATAAAAATGAAATGTCTACAATCATGGGAACAATGGGGTACCTTGATCCAGAGTACTACGAATTAGTGAACTTGAATGAAAAAAGTGACATCTATAGCTTTGGAGTTGTACTATTGGAGTTAATCACAGCTCTCCCTGCAGTGATTAAAGGAAAGCCATCAATTCACATACTCGAGTTTGTAAGACCACATCTTGAAAAAAGTGATTTAAGAAAAATTATAGATCCAAGACTCCAAGGAAAATTTAATGAAGATTCAGGACGGAAAGTTTTAGGATTAGCAGTTTCTTGCACTGCATCAACCTCAATTCAAAGACCAACAATGAGTGTTGTGTTATCTAAGCTTAAACAGTGTGTTAAAATGGAGTCTCCTAGTGATAGGGAAATATCCAGTGAATCTTATAGTTCATCTGATGTTTTTAATTCCATGGATAATGAGCCTATGACATATCCTTTCCCAAGGTAA 2667 0.3663 MANSFGFFLFLVLFFGVTVLVQAQQQTGFISIDCGGSENLNIDDVTKTKYSSEGSYIQTGVNRNISSEYAYPNNPTLPLPFSNLRSFPQGDQNCYRLTTGRKGSLYLIRASFLYGNYDGENKLPEFDLYVDVNFWSSVKFKNASEQVTLEIISTAQSEETNVCLLNTGKGVPFISGLELRPISTPIYNTEFGDSASLLLFKRWDIGSINGSGRYEDDVYDRIWFPFSSSSWKSLNSSVDIDVNGDGYRVPSEVMRTCSTPKNENDSLEFSWTSDDPNTKFYVYLYFTEVEILQGSQLRKFSVSWNGSPFNTSLVPKYGQATTLFNSKSLVAQEHRISIQKTEDSTLPPILNAVEIYVVRQLDALPTFEQDVEAIRSVKECYRVQRDWVADPCEPKNYTWEGLKCNYNTSLPPRIISLNLSRSSLSGIIAPAISNLTFLESLDLSNNSLSGPMPRFLEELRFLKYLNLRGNQLSGFVSTTLLERSKKGLLTLRVDDKNFSGSSNKKKVIAPIVASISSVIVLSVIAILYRKIRRRNEQSEEETNMLNKSVGTVVSKKLQYTYAEVLAITSNFQLVIGRGGFGSVYSGQMKDGHKVAVKMLSASSAQGPKEFQTEAELLMTVHHKNLVSFIGYCDEGDKMALIYEYLANGNLKDKLSEKSSSCLSWERRIQIAIDAAEGLDYLHHGCKPPIIHRDVKSANILLSENLEAKIADFGLSKVFKNSDNGNSESAIIYVDDKNEMSTIMGTMGYLDPEYYELVNLNEKSDIYSFGVVLLELITALPAVIKGKPSIHILEFVRPHLEKSDLRKIIDPRLQGKFNEDSGRKVLGLAVSCTASTSIQRPTMSVVLSKLKQCVKMESPSDREISSESYSSSDVFNSMDNEPMTYPFPR 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00213 888 PANTHER OS07G0107800 PROTEIN-RELATED 30 856 - -
Vivi7g00213 888 CDD STKc_IRAK 575 851 - -
Vivi7g00213 888 ProSiteProfiles Protein kinase domain profile. 569 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00213 888 MobiDBLite consensus disorder prediction 857 888 - -
Vivi7g00213 888 SUPERFAMILY L domain-like 396 501 - -
Vivi7g00213 888 Gene3D Phosphorylase Kinase; domain 1 551 644 - -
Vivi7g00213 888 Gene3D Ribonuclease Inhibitor 360 537 IPR032675 -
Vivi7g00213 888 SMART serkin_6 569 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00213 888 ProSitePatterns Serine/Threonine protein kinases active-site signature. 689 701 IPR008271 GO:0004672|GO:0006468
Vivi7g00213 888 Pfam Malectin-like domain 32 357 IPR024788 -
Vivi7g00213 888 Gene3D Transferase(Phosphotransferase) domain 1 645 875 - -
Vivi7g00213 888 FunFam Leucine-rich repeat receptor-like kinase 369 500 - -
Vivi7g00213 888 Pfam Protein tyrosine and serine/threonine kinase 573 849 IPR001245 GO:0004672|GO:0006468
Vivi7g00213 888 FunFam Leucine-rich repeat receptor-like protein kinase 546 644 - -
Vivi7g00213 888 ProSitePatterns Protein kinases ATP-binding region signature. 575 597 IPR017441 GO:0005524
Vivi7g00213 888 MobiDBLite consensus disorder prediction 862 878 - -
Vivi7g00213 888 SUPERFAMILY Protein kinase-like (PK-like) 553 849 IPR011009 -
Vivi7g00213 888 FunFam PTI1-like tyrosine-protein kinase 3 645 863 - -
Vivi7g00213 888 Pfam Leucine rich repeat 416 472 IPR001611 GO:0005515
Vivi7g00213 888 Coils Coil 528 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00213 Vivi-Chr7 12478474 12483941 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00213 9 856 Receptor kinase-like Gene Family AT4G29180 49.885 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Vivi7g00213 Malectin_like 7.2e-102 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00213 - - gmx:100793137 1178.7