Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00212 ATGGCAAATTCATTTGGTTTCTTTCTGTTTCTGGTTTTGTTTTTTGCTGTTACAGTTTTAGTTCAGGCACAACAACAAACAGGTTTCATAAGCATTGATTGTGGAAGTTCAGAGAATTTATACACAGATGATGATACAAAAATAAAATACAGTTCAGATGGATCATACATACAAACAGGAGTTAACGGAAACATTTCTTCTCAGTATGCATATCCAGCCAATCCAACTCTACCATTACCACTCTCAGATCTCAGAAGTTTTCCTCAAGGAAACCGAAACTGTTACCAAATCACAGGAAGAAAAGGAAGTTTATATTTAATAAGAGCTACTTTCTTGTATGGAAACTACGACAGCAAAAAAAAATTACCCGAATTTGATCTCTATGTTGATGTAAATTTCTGGTCATCGGTGACATTTAAGAATGCTTCAGAACAAGTTACATTGGAAATAATCAGCAGGGCACAATCTGAAGAAATAGACGTTTGTCTTGTGAATAAAGGAAAGGGAATTCCGTTTATCTCAGGGTTGGAACTTAGACCGATTAGTACTCCTATTTACAACACTGAGTTTGGAGATTCTGCTTCACTTTTGCTTTTCAAAAGATGGGATATTGGTTCAATCAATGGAAGTGGTAGATATGAAGATGATGTTTATGATAGAATTTGGTTTCCTTTTGGTTCCTCTTCATGGAAATCTCTTAACAGTTCTGGAGAAATTGATGTTAATGGAGAGGGATATAGAGTACCATCTGAAGTTATGAGAACCTGTTCTACACCGAAGAATGAGAATGATTCTTTGGAGTTTTCTTGGACTTCAAATGATCCAAATACGATGTTTTATGTCTACTTGTACTTTGCTGAAGTGGAGAGACTTCAGAGAACTCAACTGAGAAAATTCAGTGTTTCTTGGAATGGTTCTCCTTTGAATACATCAGTAGTACCCAAATACTGGCAAGCAACCTCTCTTTCTAATTCAAAGTCGTTGGTCGCAAATGAACATAGAATTTCGATACAGAAAACCGAAGATTCGACGCTTCCACCTATTCTTAATGCAGTGGAGATTTATGTAGTTAGACAATCAGATGCACTTCCAACAATTGAAGAAGATGTTGAAGCTATAAAGAGTGTAAAAGAAAGTTATAGAGTTCAAAGAGATTGGTTTGGTGATCCATGTGAACCAAAGAACTACACTTGGGAAGGCTTAAAATGCAACTACAGCACTTCACTTTCTCCAAGAATTATATCACTGAATCTAAGCAGAAGCAGTCTGAGTGGAAGCATAACTCCTGCCATTTCCAATTTGACTTTCTTGGAATCTTTGGATTTAGATAACAATAGCTTAACCGGATCAATACCTCAGTTTTTGGAAGAATTGAAATCCCTTAAATATTTGAATTTAAGGGGCAACCAACTTTCAGGTTTTGTTTCTACCACTCTCCTAGAAAGATCAAAGAAGGGATTACTTACTTTGAGGGTGGATGATAAAAATCTCTCTGGTTCAAGTAAGAAAAAGAAGGTAATTGCTCCCATTGTTGCACCAGTTATATCAGTTTTAGTTCTGTTAGTGATTGCTATTCTCTATTGGAAGCTTAGAAGAAGAAATGAAAAATCAGAGGATGAGATGCGTATGATCAACAAAAGTGTAGGAACTGTAGTATCGAAGAAGTTACAATACACTTATGCTGAGGTATTGTCCATCACCAGAAACTTTGAATTGGTCATTGGGAGGGGAGGATTTGGAAGTGTTTATAGTGGTCAGATGAAAGATGGCAATAAAGTTGCAGTCAAAATGCTTTCTGCGTCTTCAGCTCAGGGCCCGAAGGAATTTCAAACCGAGGCTGAACTTTTGATGACTGTTCATCACAAAAATTTGGTATCCTTCATTGGCTATTGTGATGAAGGCGACAAGATGGCACTCATATACGAGTACTTGGCTAATGGCAACCTAAAAGAAAATCTCTCAGAAAAAAGTTCACATTGCTTGAGTTGGGAAAGGCGAATTCAAATAGCAATTGATGCTGCAGAGGGATTGGATTATCTACACCATGGATGCAAGCCACCTATAATACACAGAGATGTAAAATCGGCTAACATTCTTCTAAGTGAAGATTTAGAAGCTAAGATAGCAGATTTTGGACTCTCTAAGGTGTTTAAGAATAGTGATAATGGAAATTCAGAAACTGCAATTATTCATGTTGATGATAAAAATGAAAAATCTACAATCATGGGAACAATGGGGTACCTTGATCCAGAGTACTACAAACTAGGGAACTTGAATGAAAAAAGTGACATCTATAGCTATGGAATTGTACTATTGGAATTAATCACAGGTCTCCCTGCAGTGATCAAAGGAAAGCCATCAATTCACATACTTGAGTTTGTAAGACCACATCTTGCTGAAAAAAGTGATTTAAGCAATATTATAGATCCAAGACTCCAAGGAAAATTTGATGAAGATTCATGCTGGAAAATTTTAGGATTAGCACTTTCTTGCACTGCATCAACCTCAATTCAAAGACCAACAATGAGTGTTGTGTTATCTGAGCTTAAACAGTGTGTTAAAATGGAGTTTCCTAGTGATAGGGAAATATCTGAGCCATCAAGACATATTTACAGTGAATATTATACTTCATCTGATGCTTTTAATTCCATGGAGAGTGAATCTATGACACATCCTTTCCCAAGGTAA 2688 0.3642 MANSFGFFLFLVLFFAVTVLVQAQQQTGFISIDCGSSENLYTDDDTKIKYSSDGSYIQTGVNGNISSQYAYPANPTLPLPLSDLRSFPQGNRNCYQITGRKGSLYLIRATFLYGNYDSKKKLPEFDLYVDVNFWSSVTFKNASEQVTLEIISRAQSEEIDVCLVNKGKGIPFISGLELRPISTPIYNTEFGDSASLLLFKRWDIGSINGSGRYEDDVYDRIWFPFGSSSWKSLNSSGEIDVNGEGYRVPSEVMRTCSTPKNENDSLEFSWTSNDPNTMFYVYLYFAEVERLQRTQLRKFSVSWNGSPLNTSVVPKYWQATSLSNSKSLVANEHRISIQKTEDSTLPPILNAVEIYVVRQSDALPTIEEDVEAIKSVKESYRVQRDWFGDPCEPKNYTWEGLKCNYSTSLSPRIISLNLSRSSLSGSITPAISNLTFLESLDLDNNSLTGSIPQFLEELKSLKYLNLRGNQLSGFVSTTLLERSKKGLLTLRVDDKNLSGSSKKKKVIAPIVAPVISVLVLLVIAILYWKLRRRNEKSEDEMRMINKSVGTVVSKKLQYTYAEVLSITRNFELVIGRGGFGSVYSGQMKDGNKVAVKMLSASSAQGPKEFQTEAELLMTVHHKNLVSFIGYCDEGDKMALIYEYLANGNLKENLSEKSSHCLSWERRIQIAIDAAEGLDYLHHGCKPPIIHRDVKSANILLSEDLEAKIADFGLSKVFKNSDNGNSETAIIHVDDKNEKSTIMGTMGYLDPEYYKLGNLNEKSDIYSYGIVLLELITGLPAVIKGKPSIHILEFVRPHLAEKSDLSNIIDPRLQGKFDEDSCWKILGLALSCTASTSIQRPTMSVVLSELKQCVKMEFPSDREISEPSRHIYSEYYTSSDAFNSMESESMTHPFPR 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00212 895 Pfam Protein tyrosine and serine/threonine kinase 572 849 IPR001245 GO:0004672|GO:0006468
Vivi7g00212 895 CDD STKc_IRAK 574 851 - -
Vivi7g00212 895 ProSitePatterns Protein kinases ATP-binding region signature. 574 596 IPR017441 GO:0005524
Vivi7g00212 895 SMART serkin_6 568 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00212 895 Gene3D Ribonuclease Inhibitor 360 500 IPR032675 -
Vivi7g00212 895 FunFam Leucine-rich repeat receptor-like protein kinase 545 643 - -
Vivi7g00212 895 PANTHER OS07G0107800 PROTEIN-RELATED 30 853 - -
Vivi7g00212 895 SUPERFAMILY L domain-like 395 499 - -
Vivi7g00212 895 Pfam Leucine rich repeat 415 471 IPR001611 GO:0005515
Vivi7g00212 895 SUPERFAMILY Protein kinase-like (PK-like) 553 849 IPR011009 -
Vivi7g00212 895 FunFam PTI1-like tyrosine-protein kinase 3 644 862 - -
Vivi7g00212 895 ProSitePatterns Serine/Threonine protein kinases active-site signature. 688 700 IPR008271 GO:0004672|GO:0006468
Vivi7g00212 895 ProSiteProfiles Protein kinase domain profile. 568 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g00212 895 Gene3D Phosphorylase Kinase; domain 1 550 643 - -
Vivi7g00212 895 Pfam Malectin-like domain 32 356 IPR024788 -
Vivi7g00212 895 FunFam Leucine-rich repeat receptor-like kinase 366 500 - -
Vivi7g00212 895 Gene3D Transferase(Phosphotransferase) domain 1 644 870 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00212 Vivi-Chr7 12471401 12477847 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g00212 9 878 Receptor kinase-like Gene Family AT4G29180 49.832 0.0 868
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Vivi7g00212 Malectin_like 1.7e-105 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00212 - - gmx:100793137 1196.8